EnhancerDB
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  3. vista2571[chr1:95249173-95249377]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2571[chr1:95249173-95249377]
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Tissue distribution of vista2571
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Transcription factor that possibly regulate vista2571[chr1:95249173-95249377]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 95249183 95249405 FOXA1 UCSC Txn Factor no Conserved 107815974
chr1 95249166 95249181 RUNX2 JASPAR yes 30915759
chr1 95249166 95249181 RUNX2 JASPAR yes 118333827
chr1 95249264 95249279 FOXA1 JASPAR yes 30915760
chr1 95249264 95249279 FOXA1 JASPAR yes 118333828
chr1 95249266 95249278 FOXC2 JASPAR yes 30915761
chr1 95249266 95249278 FOXC2 JASPAR yes 118333829
chr1 95249266 95249280 FOXF2 JASPAR yes 30915762
chr1 95249266 95249280 FOXF2 JASPAR yes 118333830
chr1 95249267 95249278 FOXB1 JASPAR yes 30915763
chr1 95249267 95249278 FOXC1 JASPAR yes 30915764
chr1 95249267 95249278 FOXB1 JASPAR yes 118333831
chr1 95249267 95249278 FOXC1 JASPAR yes 118333832
chr1 95249268 95249272 YY1 TRANSFAC yes 30915765
chr1 95249268 95249272 YY1 TRANSFAC yes 118333833
chr1 95249268 95249279 FOXA1 JASPAR yes 30915766
chr1 95249268 95249279 FOXA1 JASPAR yes 118333834
chr1 95249290 95249296 MZF1 JASPAR yes 30915767
chr1 95249290 95249296 MZF1 JASPAR yes 118333835
chr1 95249310 95249321 HOXA10 JASPAR yes 30915768
chr1 95249310 95249321 HOXA10 JASPAR yes 118333836
chr1 95249311 95249320 CDX1 JASPAR yes 30915769
chr1 95249311 95249320 CDX1 JASPAR yes 118333837
chr1 95249312 95249329 BCL6B JASPAR yes 30915770
chr1 95249312 95249329 BCL6B JASPAR yes 118333838
chr1 95249315 95249326 STAT1 JASPAR yes 30915771
chr1 95249315 95249326 STAT1 JASPAR yes 118333839
chr1 95249321 95249335 RORA JASPAR yes 30915772
chr1 95249321 95249335 RORA JASPAR yes 118333840
chr1 95249349 95249352 MYB TRANSFAC yes 30915773
chr1 95249349 95249352 MYB TRANSFAC yes 118333841
chr1 95249355 95249362 SPI1 JASPAR yes 30915774
chr1 95249355 95249362 SPI1 JASPAR yes 118333842
SNP sites on vista2571[chr1:95249173-95249377]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 95249306 rs12743267 C T
FOXA1
498681
chr1 95249335 rs74425357 T C
FOXA1 RORA
498682
Genes possibly regulated by vista2571[chr1:95249173-95249377]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 95285898 95360802 + SLC44A3 ENSG00000143036.12 95285898 0.94 1.0 914 63479
Expression level of Genes
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miRNAs possibly regulated by vista2571[chr1:95249173-95249377]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results