EnhancerDB
  1. Home
  2. Enhancers
  3. vista25717[chr17:67055729-67056007]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25717[chr17:67055729-67056007]
Back to top
Tissue distribution of vista25717
Back to top
Transcription factor that possibly regulate vista25717[chr17:67055729-67056007]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 67055736 67055749 EOMES JASPAR yes 21283463
chr17 67055738 67055749 TBX20 JASPAR yes 21283464
chr17 67055739 67055749 TBX21 JASPAR yes 21283465
chr17 67055740 67055748 MGA JASPAR yes 21283466
chr17 67055740 67055748 TBX15 JASPAR yes 21283467
chr17 67055740 67055748 TBX1 JASPAR yes 21283468
chr17 67055740 67055748 TBX4 JASPAR yes 21283469
chr17 67055740 67055748 TBX5 JASPAR yes 21283470
chr17 67055749 67055752 MYB TRANSFAC yes 21283471
chr17 67055772 67055775 MYB TRANSFAC yes 21283472
chr17 67055775 67055790 FOXP1 JASPAR yes 21283473
chr17 67055780 67055786 TCF4 TRANSFAC yes 21283474
chr17 67055790 67055799 VENTX JASPAR yes 21283475
chr17 67055793 67055797 YY1 TRANSFAC yes 21283476
chr17 67055796 67055811 RUNX2 JASPAR yes 21283477
chr17 67055799 67055810 RUNX1 JASPAR yes 21283478
chr17 67055800 67055810 RUNX3 JASPAR yes 21283479
chr17 67055805 67055809 ESR1 TRANSFAC yes 21283480
chr17 67055805 67055826 IRF1 JASPAR yes 21283481
chr17 67055808 67055812 YY1 TRANSFAC yes 21283482
chr17 67055808 67055823 FOXP1 JASPAR yes 21283483
chr17 67055809 67055824 FOXP1 JASPAR yes 21283484
chr17 67055810 67055825 FOXP1 JASPAR yes 21283485
chr17 67055811 67055826 FOXP1 JASPAR yes 21283486
chr17 67055816 67055831 FOXP1 JASPAR yes 21283487
chr17 67055829 67055844 PRDM1 JASPAR yes 21283488
chr17 67055829 67055844 STAT2 JASPAR yes 21283489
chr17 67055842 67055845 MYB TRANSFAC yes 21283490
chr17 67055844 67055864 RREB1 JASPAR yes 21283491
chr17 67055847 67055862 NR2C2 JASPAR yes 21283492
chr17 67055848 67055858 SP1 JASPAR yes 21283493
chr17 67055848 67055869 ZNF263 JASPAR yes 21283494
chr17 67055849 67055859 SP1 JASPAR yes 21283495
chr17 67055849 67055870 ZNF263 JASPAR yes 21283496
chr17 67055850 67055854 LFA1 TRANSFAC yes 21283497
chr17 67055861 67055871 SP1 JASPAR yes 21283498
chr17 67055862 67055867 ETS2 TRANSFAC yes 21283499
chr17 67055874 67055889 TFAP2A JASPAR yes 21283500
chr17 67055876 67055891 TFAP2C JASPAR yes 21283501
chr17 67055877 67055888 TFAP2A JASPAR yes 21283502
chr17 67055877 67055888 TFAP2B JASPAR yes 21283503
chr17 67055877 67055888 TFAP2C JASPAR yes 21283504
chr17 67055895 67055908 ELF1 JASPAR yes 21283505
chr17 67055898 67055908 GABPA JASPAR yes 21283506
chr17 67055902 67055922 TP53 JASPAR yes 21283507
chr17 67055917 67055921 YY1 TRANSFAC yes 21283508
chr17 67055921 67055925 YY1 TRANSFAC yes 21283509
chr17 67055922 67055932 HOXC10 JASPAR yes 21283510
chr17 67055922 67055932 HOXD11 JASPAR yes 21283511
chr17 67055922 67055932 HOXD13 JASPAR yes 21283512
chr17 67055922 67055933 HOXA10 JASPAR yes 21283513
chr17 67055922 67055933 HOXC11 JASPAR yes 21283514
chr17 67055922 67055933 HOXC12 JASPAR yes 21283515
chr17 67055922 67055933 HOXC13 JASPAR yes 21283516
chr17 67055922 67055933 HOXD12 JASPAR yes 21283517
chr17 67055923 67055932 CDX1 JASPAR yes 21283518
chr17 67055925 67055939 CREB3 JASPAR yes 21283519
chr17 67055926 67055940 XBP1 JASPAR yes 21283520
chr17 67055928 67055933 ATF1 TRANSFAC yes 21283521
chr17 67055929 67055950 MAFG JASPAR yes 21283522
chr17 67055931 67055942 NFE2 JASPAR yes 21283523
chr17 67055934 67055952 MAFF JASPAR yes 21283524
chr17 67055939 67055950 NRL JASPAR yes 21283525
chr17 67055948 67055954 SOX10 JASPAR yes 21283526
chr17 67055956 67055960 LFA1 TRANSFAC yes 21283527
chr17 67055962 67055974 BHLHE23 JASPAR yes 21283528
chr17 67055963 67055973 NEUROG2 JASPAR yes 21283529
chr17 67055967 67055975 FOXL1 JASPAR yes 21283530
chr17 67055975 67055990 HSF1 JASPAR yes 21283531
chr17 67055979 67055983 NFE TRANSFAC yes 21283532
SNP sites on vista25717[chr17:67055729-67056007]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 67055765 rs28685601 T C no 5017250
chr17 67055784 rs73354208 T A,C
FOXP1 TCF4
5017251
chr17 67055810 rs11380738 A AT
FOXP1 IRF1 RUNX1 RUNX2 RUNX3 YY1
5017252
chr17 67055810 rs559728474 A AT
FOXP1 IRF1 RUNX1 RUNX2 RUNX3 YY1
5017253
chr17 67055818 rs28582619 T A
FOXP1 IRF1
5017254
chr17 67055853 rs375151113 G T
LFA1 NR2C2 RREB1 SP1 ZNF263
5017255
chr17 67055901 rs1055448 A G
ELF1 GABPA
5017256
chr17 67055933 rs190763110 G A
ATF1 CREB3 HOXA10 HOXC11 HOXC12 HOXC13 HOXD12 MAFG NFE2 XBP1
5017257
chr17 67055993 rs564153481 A C no 5017258
Genes possibly regulated by vista25717[chr17:67055729-67056007]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 66970629 67057205 - ABCA9 ENSG00000154258.12 67057205 0.85 0.81 16191 98802
chr17 67074843 67138029 - ABCA6 ENSG00000154262.8 67138029 0.83 0.99 16192 17978
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25717[chr17:67055729-67056007]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results