EnhancerDB
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  3. vista2574[chr1:95260997-95261398]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2574[chr1:95260997-95261398]
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Tissue distribution of vista2574
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Transcription factor that possibly regulate vista2574[chr1:95260997-95261398]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 95260995 95261001 YY1 JASPAR yes 30917135
chr1 95260995 95261001 YY1 JASPAR yes 118334028
chr1 95261006 95261011 GATA2 JASPAR yes 30917136
chr1 95261006 95261011 GATA2 JASPAR yes 118334029
chr1 95261009 95261013 YY1 TRANSFAC yes 30917137
chr1 95261009 95261013 YY1 TRANSFAC yes 118334030
chr1 95261009 95261024 PRDM1 JASPAR yes 30917138
chr1 95261009 95261024 PRDM1 JASPAR yes 118334031
chr1 95261011 95261025 IRF7 JASPAR yes 30917139
chr1 95261011 95261025 IRF7 JASPAR yes 118334032
chr1 95261028 95261034 NFIC JASPAR yes 30917140
chr1 95261028 95261034 NFIC JASPAR yes 118334033
chr1 95261056 95261067 CDX2 JASPAR yes 30917141
chr1 95261056 95261067 CDX2 JASPAR yes 118334034
chr1 95261069 95261083 TLX1 JASPAR yes 30917142
chr1 95261069 95261083 TLX1 JASPAR yes 118334035
chr1 95261070 95261084 TLX1 JASPAR yes 30917143
chr1 95261070 95261084 TLX1 JASPAR yes 118334036
chr1 95261080 95261084 H1TF2 TRANSFAC yes 30917144
chr1 95261080 95261084 NFE TRANSFAC yes 30917145
chr1 95261080 95261084 SRF TRANSFAC yes 30917146
chr1 95261080 95261084 H1TF2 TRANSFAC yes 118334037
chr1 95261080 95261084 NFE TRANSFAC yes 118334038
chr1 95261080 95261084 SRF TRANSFAC yes 118334039
chr1 95261083 95261093 HOXB13 JASPAR yes 30917147
chr1 95261083 95261093 HOXB13 JASPAR yes 118334040
chr1 95261087 95261091 YY1 TRANSFAC yes 30917148
chr1 95261087 95261091 YY1 TRANSFAC yes 118334041
chr1 95261104 95261115 NFKB1 JASPAR yes 30917149
chr1 95261104 95261115 NFKB1 JASPAR yes 118334042
chr1 95261127 95261131 LFA1 TRANSFAC yes 30917150
chr1 95261127 95261131 LFA1 TRANSFAC yes 118334043
chr1 95261165 95261171 HiNF-A TRANSFAC yes 30917151
chr1 95261165 95261171 HiNF-A TRANSFAC yes 118334044
chr1 95261168 95261178 BHLHE40 JASPAR yes 30917152
chr1 95261168 95261178 CLOCK JASPAR yes 30917153
chr1 95261168 95261178 HEY1 JASPAR yes 30917154
chr1 95261168 95261178 MAX JASPAR yes 30917155
chr1 95261168 95261178 MNT JASPAR yes 30917156
chr1 95261168 95261178 BHLHE40 JASPAR yes 118334045
chr1 95261168 95261178 CLOCK JASPAR yes 118334046
chr1 95261168 95261178 HEY1 JASPAR yes 118334047
chr1 95261168 95261178 MAX JASPAR yes 118334048
chr1 95261168 95261178 MNT JASPAR yes 118334049
chr1 95261170 95261175 MYC TRANSFAC yes 30917157
chr1 95261170 95261175 USF1 TRANSFAC yes 30917158
chr1 95261170 95261175 USF2 TRANSFAC yes 30917159
chr1 95261170 95261175 MYC TRANSFAC yes 118334050
chr1 95261170 95261175 USF1 TRANSFAC yes 118334051
chr1 95261170 95261175 USF2 TRANSFAC yes 118334052
chr1 95261222 95261241 PAX5 JASPAR yes 30917160
chr1 95261222 95261241 PAX5 JASPAR yes 118334053
chr1 95261238 95261249 ELK4 JASPAR yes 30917161
chr1 95261238 95261249 FLI1 JASPAR yes 30917162
chr1 95261238 95261249 ELK4 JASPAR yes 118334054
chr1 95261238 95261249 FLI1 JASPAR yes 118334055
chr1 95261239 95261249 ERF JASPAR yes 30917163
chr1 95261239 95261249 ETS1 JASPAR yes 30917164
chr1 95261239 95261249 ERF JASPAR yes 118334056
chr1 95261239 95261249 ETS1 JASPAR yes 118334057
chr1 95261239 95261250 ETV2 JASPAR yes 30917165
chr1 95261239 95261250 ETV2 JASPAR yes 118334058
chr1 95261239 95261252 ELF1 JASPAR yes 30917166
chr1 95261239 95261252 ELF1 JASPAR yes 118334059
chr1 95261244 95261252 MEIS2 JASPAR yes 30917167
chr1 95261244 95261252 MEIS3 JASPAR yes 30917168
chr1 95261244 95261252 MEIS2 JASPAR yes 118334060
chr1 95261244 95261252 MEIS3 JASPAR yes 118334061
chr1 95261245 95261249 NFE TRANSFAC yes 30917169
chr1 95261245 95261249 NFE TRANSFAC yes 118334062
chr1 95261256 95261267 ETV2 JASPAR yes 30917170
chr1 95261256 95261267 SPDEF JASPAR yes 30917171
chr1 95261256 95261267 ETV2 JASPAR yes 118334063
chr1 95261256 95261267 SPDEF JASPAR yes 118334064
chr1 95261257 95261267 ERF JASPAR yes 30917172
chr1 95261257 95261267 ERG JASPAR yes 30917173
chr1 95261257 95261267 ETS1 JASPAR yes 30917174
chr1 95261257 95261267 ERF JASPAR yes 118334065
chr1 95261257 95261267 ERG JASPAR yes 118334066
chr1 95261257 95261267 ETS1 JASPAR yes 118334067
chr1 95261257 95261268 FLI1 JASPAR yes 30917175
chr1 95261257 95261268 FLI1 JASPAR yes 118334068
chr1 95261258 95261265 PEA3 TRANSFAC yes 30917176
chr1 95261258 95261265 PEA3 TRANSFAC yes 118334069
chr1 95261268 95261282 ZIC1 JASPAR yes 30917177
chr1 95261268 95261282 ZIC1 JASPAR yes 118334070
chr1 95261271 95261282 ETV2 JASPAR yes 30917178
chr1 95261271 95261282 SPDEF JASPAR yes 30917179
chr1 95261271 95261282 ETV2 JASPAR yes 118334071
chr1 95261271 95261282 SPDEF JASPAR yes 118334072
chr1 95261271 95261287 SOX8 JASPAR yes 30917180
chr1 95261271 95261287 SOX8 JASPAR yes 118334073
chr1 95261272 95261282 ERF JASPAR yes 30917181
chr1 95261272 95261282 ETS1 JASPAR yes 30917182
chr1 95261272 95261282 ERF JASPAR yes 118334074
chr1 95261272 95261282 ETS1 JASPAR yes 118334075
chr1 95261272 95261283 FLI1 JASPAR yes 30917183
chr1 95261272 95261283 FLI1 JASPAR yes 118334076
chr1 95261273 95261280 PEA3 TRANSFAC yes 30917184
chr1 95261273 95261280 PEA3 TRANSFAC yes 118334077
chr1 95261288 95261303 FOXP1 JASPAR yes 30917185
chr1 95261288 95261303 FOXP1 JASPAR yes 118334078
chr1 95261288 95261309 IRF1 JASPAR yes 30917186
chr1 95261288 95261309 IRF1 JASPAR yes 118334079
chr1 95261289 95261300 FOXP2 JASPAR yes 30917187
chr1 95261289 95261300 FOXP2 JASPAR yes 118334080
chr1 95261290 95261305 STAT2 JASPAR yes 30917188
chr1 95261290 95261305 STAT2 JASPAR yes 118334081
chr1 95261295 95261310 FOXP1 JASPAR yes 30917189
chr1 95261295 95261310 FOXP1 JASPAR yes 118334082
chr1 95261296 95261307 FOXP2 JASPAR yes 30917190
chr1 95261296 95261307 FOXP2 JASPAR yes 118334083
chr1 95261298 95261306 FOXO3 JASPAR yes 30917191
chr1 95261298 95261306 FOXO3 JASPAR yes 118334084
chr1 95261300 95261307 NFATC2 JASPAR yes 30917192
chr1 95261300 95261307 NFATC2 JASPAR yes 118334085
chr1 95261306 95261321 MEF2A JASPAR yes 30917193
chr1 95261306 95261321 MEF2A JASPAR yes 118334086
chr1 95261307 95261319 MEF2A JASPAR yes 30917194
chr1 95261307 95261319 MEF2D JASPAR yes 30917195
chr1 95261307 95261319 MEF2A JASPAR yes 118334087
chr1 95261307 95261319 MEF2D JASPAR yes 118334088
chr1 95261315 95261318 MYB TRANSFAC yes 30917196
chr1 95261315 95261318 MYB TRANSFAC yes 118334089
chr1 95261315 95261331 SOX4 JASPAR yes 30917197
chr1 95261315 95261331 SOX4 JASPAR yes 118334090
chr1 95261333 95261346 DUXA JASPAR yes 30917198
chr1 95261333 95261346 DUXA JASPAR yes 118334091
chr1 95261339 95261353 RXRG JASPAR yes 30917199
chr1 95261339 95261353 RXRG JASPAR yes 118334092
chr1 95261342 95261355 NR2F1 JASPAR yes 30917200
chr1 95261342 95261355 NR2F1 JASPAR yes 118334093
chr1 95261343 95261362 CTCF JASPAR yes 30917201
chr1 95261343 95261362 CTCF JASPAR yes 118334094
chr1 95261352 95261367 RFX5 JASPAR yes 30917202
chr1 95261352 95261367 RFX5 JASPAR yes 118334095
chr1 95261371 95261378 SPIB JASPAR yes 30917203
chr1 95261371 95261378 SPIB JASPAR yes 118334096
chr1 95261373 95261384 NFKB1 JASPAR yes 30917204
chr1 95261373 95261384 NFKB1 JASPAR yes 118334097
chr1 95261374 95261384 RELA JASPAR yes 30917205
chr1 95261374 95261384 REL JASPAR yes 30917206
chr1 95261374 95261384 RELA JASPAR yes 118334098
chr1 95261374 95261384 REL JASPAR yes 118334099
chr1 95261375 95261386 FOXH1 JASPAR yes 30917207
chr1 95261375 95261386 FOXH1 JASPAR yes 118334100
chr1 95261379 95261385 ZNF354C JASPAR yes 30917208
chr1 95261379 95261385 ZNF354C JASPAR yes 118334101
SNP sites on vista2574[chr1:95260997-95261398]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 95261045 rs535989326 C T no 498793
chr1 95261059 rs113828912 A C
CDX2
498794
chr1 95261240 rs113438559 T C
ELF1 ELK4 ERF ETS1 ETV2 FLI1 PAX5
498795
Genes possibly regulated by vista2574[chr1:95260997-95261398]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 95285898 95360802 + SLC44A3 ENSG00000143036.12 95285898 0.94 1.0 914 75500
Expression level of Genes
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miRNAs possibly regulated by vista2574[chr1:95260997-95261398]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results