EnhancerDB
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  3. vista25741[chr17:68078545-68078943]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25741[chr17:68078545-68078943]
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Tissue distribution of vista25741
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Transcription factor that possibly regulate vista25741[chr17:68078545-68078943]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 68078553 68078563 NKX2-3 JASPAR yes 21284625
chr17 68078554 68078563 NKX2-8 JASPAR yes 21284626
chr17 68078565 68078569 TEAD2 TRANSFAC yes 21284627
chr17 68078574 68078590 SOX4 JASPAR yes 21284628
chr17 68078625 68078635 ALX3 JASPAR yes 21284629
chr17 68078625 68078635 GSX2 JASPAR yes 21284630
chr17 68078625 68078635 MIXL1 JASPAR yes 21284631
chr17 68078625 68078635 MNX1 JASPAR yes 21284632
chr17 68078626 68078634 ISX JASPAR yes 21284633
chr17 68078626 68078634 LHX9 JASPAR yes 21284634
chr17 68078626 68078634 LMX1B JASPAR yes 21284635
chr17 68078626 68078634 PRRX1 JASPAR yes 21284636
chr17 68078626 68078634 RAX2 JASPAR yes 21284637
chr17 68078626 68078634 SHOX JASPAR yes 21284638
chr17 68078626 68078634 UNCX JASPAR yes 21284639
chr17 68078629 68078634 MYB TRANSFAC yes 21284640
chr17 68078632 68078645 ZBTB18 JASPAR yes 21284641
chr17 68078642 68078663 ZNF263 JASPAR yes 21284642
chr17 68078654 68078660 GATA3 JASPAR yes 21284643
chr17 68078664 68078674 POU6F2 JASPAR yes 21284644
chr17 68078665 68078675 ALX3 JASPAR yes 21284645
chr17 68078665 68078675 EMX1 JASPAR yes 21284646
chr17 68078665 68078675 EMX2 JASPAR yes 21284647
chr17 68078665 68078675 EN2 JASPAR yes 21284648
chr17 68078665 68078675 ESX1 JASPAR yes 21284649
chr17 68078665 68078675 EVX1 JASPAR yes 21284650
chr17 68078665 68078675 EVX2 JASPAR yes 21284651
chr17 68078665 68078675 GBX1 JASPAR yes 21284652
chr17 68078665 68078675 GBX2 JASPAR yes 21284653
chr17 68078665 68078675 GSX1 JASPAR yes 21284654
chr17 68078665 68078675 GSX2 JASPAR yes 21284655
chr17 68078665 68078675 HESX1 JASPAR yes 21284656
chr17 68078665 68078675 HOXA2 JASPAR yes 21284657
chr17 68078665 68078675 HOXB2 JASPAR yes 21284658
chr17 68078665 68078675 HOXB3 JASPAR yes 21284659
chr17 68078665 68078675 LBX2 JASPAR yes 21284660
chr17 68078665 68078675 LHX2 JASPAR yes 21284661
chr17 68078665 68078675 LHX6 JASPAR yes 21284662
chr17 68078665 68078675 MEOX1 JASPAR yes 21284663
chr17 68078665 68078675 MEOX2 JASPAR yes 21284664
chr17 68078665 68078675 MIXL1 JASPAR yes 21284665
chr17 68078665 68078675 NOTO JASPAR yes 21284666
chr17 68078665 68078675 POU6F1 JASPAR yes 21284667
chr17 68078665 68078675 RAX JASPAR yes 21284668
chr17 68078666 68078674 EN1 JASPAR yes 21284669
chr17 68078666 68078674 ISX JASPAR yes 21284670
chr17 68078666 68078674 LBX1 JASPAR yes 21284671
chr17 68078666 68078674 LHX9 JASPAR yes 21284672
chr17 68078666 68078674 PAX4 JASPAR yes 21284673
chr17 68078666 68078674 PDX1 JASPAR yes 21284674
chr17 68078666 68078674 PRRX1 JASPAR yes 21284675
chr17 68078666 68078674 RAX2 JASPAR yes 21284676
chr17 68078666 68078674 SHOX JASPAR yes 21284677
chr17 68078666 68078674 UNCX JASPAR yes 21284678
chr17 68078666 68078674 VAX1 JASPAR yes 21284679
chr17 68078666 68078674 VAX2 JASPAR yes 21284680
chr17 68078666 68078674 VSX1 JASPAR yes 21284681
chr17 68078666 68078674 VSX2 JASPAR yes 21284682
chr17 68078668 68078676 HOXA5 JASPAR yes 21284683
chr17 68078671 68078686 FOXP1 JASPAR yes 21284684
chr17 68078674 68078682 FOXO3 JASPAR yes 21284685
chr17 68078698 68078713 NR2C2 JASPAR yes 21284686
chr17 68078699 68078713 RXRB JASPAR yes 21284687
chr17 68078699 68078713 RXRG JASPAR yes 21284688
chr17 68078719 68078723 YY1 TRANSFAC yes 21284689
chr17 68078719 68078734 STAT1 JASPAR yes 21284690
chr17 68078721 68078732 STAT1 JASPAR yes 21284691
chr17 68078721 68078732 STAT3 JASPAR yes 21284692
chr17 68078726 68078740 STAT1 JASPAR yes 21284693
chr17 68078726 68078741 STAT2 JASPAR yes 21284694
chr17 68078727 68078733 HiNF-A TRANSFAC yes 21284695
chr17 68078728 68078749 IRF1 JASPAR yes 21284696
chr17 68078744 68078747 MYB TRANSFAC yes 21284697
chr17 68078754 68078769 SOX21 JASPAR yes 21284698
chr17 68078827 68078830 MYB TRANSFAC yes 21284699
chr17 68078840 68078844 NFE TRANSFAC yes 21284700
chr17 68078840 68078845 GATA1 TRANSFAC yes 21284701
chr17 68078840 68078846 GATA3 JASPAR yes 21284702
chr17 68078870 68078883 EOMES JASPAR yes 21284703
chr17 68078872 68078882 TBR1 JASPAR yes 21284704
chr17 68078872 68078883 TBX20 JASPAR yes 21284705
chr17 68078872 68078883 TBX2 JASPAR yes 21284706
chr17 68078873 68078883 TBX21 JASPAR yes 21284707
chr17 68078874 68078882 MGA JASPAR yes 21284708
chr17 68078874 68078882 TBX15 JASPAR yes 21284709
chr17 68078874 68078882 TBX1 JASPAR yes 21284710
chr17 68078874 68078882 TBX4 JASPAR yes 21284711
chr17 68078874 68078882 TBX5 JASPAR yes 21284712
chr17 68078874 68078883 ZEB1 JASPAR yes 21284713
chr17 68078874 68078887 ZBTB18 JASPAR yes 21284714
chr17 68078875 68078885 FIGLA JASPAR yes 21284715
chr17 68078875 68078885 ID4 JASPAR yes 21284716
chr17 68078875 68078885 TCF3 JASPAR yes 21284717
chr17 68078875 68078885 TCF4 JASPAR yes 21284718
chr17 68078877 68078882 USF2 TRANSFAC yes 21284719
chr17 68078882 68078887 GATA2 JASPAR yes 21284720
chr17 68078918 68078924 SOX10 JASPAR yes 21284721
SNP sites on vista25741[chr17:68078545-68078943]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 68078570 rs4968877 A G no 5022326
chr17 68078744 rs115970609 C G,T
IRF1 MYB
5022327
chr17 68078886 rs2158970 T C
GATA2 ZBTB18
5022328
Genes possibly regulated by vista25741[chr17:68078545-68078943]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 68049570 68131749 + KCNJ16 ENSG00000153822.9 68049570 0.97 0.93 16196 71025
chr17 68164814 68176189 + KCNJ2 ENSG00000123700.4 68164814 0.91 0.96 16197 14129
Expression level of Genes
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miRNAs possibly regulated by vista25741[chr17:68078545-68078943]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results