EnhancerDB
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  3. vista25747[chr17:68135658-68135754]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25747[chr17:68135658-68135754]
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Tissue distribution of vista25747
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Transcription factor that possibly regulate vista25747[chr17:68135658-68135754]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 68135643 68135658 FOXP1 JASPAR yes 21284915
chr17 68135643 68135658 FOXP1 JASPAR yes 55678549
chr17 68135652 68135658 SOX10 JASPAR yes 21284916
chr17 68135652 68135658 SOX10 JASPAR yes 55678553
chr17 68135653 68135668 FOXP1 JASPAR yes 21284917
chr17 68135653 68135668 FOXP1 JASPAR yes 55678554
chr17 68135654 68135675 IRF1 JASPAR yes 21284918
chr17 68135654 68135675 IRF1 JASPAR yes 55678555
chr17 68135659 68135665 TBP TRANSFAC yes 21284919
chr17 68135659 68135665 TBP TRANSFAC yes 55678556
chr17 68135659 68135674 FOXP1 JASPAR yes 21284920
chr17 68135659 68135674 FOXP1 JASPAR yes 55678557
chr17 68135668 68135674 HiNF-A TRANSFAC yes 21284921
chr17 68135668 68135674 HiNF-A TRANSFAC yes 55678558
chr17 68135672 68135685 SMAD2 JASPAR yes 21284922
chr17 68135672 68135685 SMAD2 JASPAR yes 55678559
chr17 68135680 68135690 MSC JASPAR yes 21284923
chr17 68135680 68135690 NHLH1 JASPAR yes 21284924
chr17 68135680 68135690 MSC JASPAR yes 55678560
chr17 68135680 68135690 NHLH1 JASPAR yes 55678561
chr17 68135690 68135699 JDP2 JASPAR yes 21284925
chr17 68135690 68135699 JDP2 JASPAR yes 55678562
chr17 68135703 68135708 ETS2 TRANSFAC yes 21284926
chr17 68135703 68135708 ETS2 TRANSFAC yes 55678563
chr17 68135708 68135716 GATA3 JASPAR yes 21284927
chr17 68135708 68135716 GATA3 JASPAR yes 55678564
chr17 68135741 68135746 MYB TRANSFAC yes 21284928
chr17 68135741 68135746 MYB TRANSFAC yes 55678565
chr17 68135741 68135756 FOXP1 JASPAR yes 21284929
chr17 68135741 68135756 FOXP1 JASPAR yes 55678566
chr17 68135743 68135758 FOXP1 JASPAR yes 21284930
chr17 68135743 68135758 FOXP1 JASPAR yes 55678567
chr17 68135745 68135760 FOXP1 JASPAR yes 21284931
chr17 68135745 68135760 FOXP1 JASPAR yes 55678568
chr17 68135745 68135766 IRF1 JASPAR yes 21284932
chr17 68135745 68135766 IRF1 JASPAR yes 55678569
chr17 68135746 68135761 FOXP1 JASPAR yes 21284933
chr17 68135746 68135761 FOXP1 JASPAR yes 55678570
chr17 68135747 68135753 TBP TRANSFAC yes 21284934
chr17 68135747 68135753 TBP TRANSFAC yes 55678571
SNP sites on vista25747[chr17:68135658-68135754]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 68135660 rs376406976 T TA
FOXP1 IRF1 TBP
5022720
chr17 68135660 rs531803210 T TA
FOXP1 IRF1 TBP
5022721
chr17 68135696 rs7217947 T C
JDP2
5022722
chr17 68135734 rs551814732 AAAC A no 5022723
chr17 68135740 rs4405595 C T no 5022724
chr17 68135748 rs10537530 TAAAA T
FOXP1 IRF1 TBP
5022725
Genes possibly regulated by vista25747[chr17:68135658-68135754]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 68049570 68131749 + KCNJ16 ENSG00000153822.9 68049570 0.97 0.93 16196 13912
chr17 68164814 68176189 + KCNJ2 ENSG00000123700.4 68164814 0.91 0.96 16197 70940
Expression level of Genes
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miRNAs possibly regulated by vista25747[chr17:68135658-68135754]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results