EnhancerDB
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  3. vista25850[chr17:71087635-71087942]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25850[chr17:71087635-71087942]
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Tissue distribution of vista25850
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Transcription factor that possibly regulate vista25850[chr17:71087635-71087942]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 71087648 71087668 PPARG JASPAR yes 21289553
chr17 71087659 71087665 NFE2 TRANSFAC yes 21289554
chr17 71087672 71087677 NFY TRANSFAC yes 21289555
chr17 71087674 71087680 NFIC JASPAR yes 21289556
chr17 71087692 71087706 EBF1 JASPAR yes 21289557
chr17 71087700 71087714 STAT1 JASPAR yes 21289558
chr17 71087700 71087715 AR JASPAR yes 21289559
chr17 71087700 71087715 STAT2 JASPAR yes 21289560
chr17 71087723 71087734 EBF1 JASPAR yes 21289561
chr17 71087730 71087745 PRDM1 JASPAR yes 21289562
chr17 71087742 71087757 HSF1 JASPAR yes 21289563
chr17 71087745 71087759 TLX1 JASPAR yes 21289564
chr17 71087746 71087760 TLX1 JASPAR yes 21289565
chr17 71087752 71087766 EBF1 JASPAR yes 21289566
chr17 71087753 71087764 EBF1 JASPAR yes 21289567
chr17 71087754 71087765 EBF1 JASPAR yes 21289568
chr17 71087760 71087775 AR JASPAR yes 21289569
chr17 71087760 71087777 NR3C2 JASPAR yes 21289570
chr17 71087765 71087777 PROX1 JASPAR yes 21289571
chr17 71087779 71087782 MYB TRANSFAC yes 21289572
chr17 71087794 71087797 MYB TRANSFAC yes 21289573
chr17 71087826 71087838 HLF JASPAR yes 21289574
chr17 71087827 71087837 CEBPB JASPAR yes 21289575
chr17 71087827 71087837 CEBPD JASPAR yes 21289576
chr17 71087827 71087837 CEBPE JASPAR yes 21289577
chr17 71087827 71087837 CEBPG JASPAR yes 21289578
chr17 71087858 71087863 TFAP2A TRANSFAC yes 21289579
chr17 71087858 71087864 MZF1 JASPAR yes 21289580
chr17 71087861 71087866 GATA2 JASPAR yes 21289581
chr17 71087866 71087879 DUXA JASPAR yes 21289582
chr17 71087867 71087878 DUX4 JASPAR yes 21289583
chr17 71087910 71087928 RARA JASPAR yes 21289584
chr17 71087929 71087932 MYB TRANSFAC yes 21289585
chr17 71087932 71087941 NFIX JASPAR yes 21289586
chr17 71087934 71087940 NFIC JASPAR yes 21289587
SNP sites on vista25850[chr17:71087635-71087942]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 71087682 rs190195268 G A no 5041157
chr17 71087694 rs968161 G A
EBF1
5041158
chr17 71087736 rs140324066 GAA G
PRDM1
5041159
chr17 71087752 rs114288337 G C
EBF1 HSF1 TLX1
5041160
chr17 71087763 rs182383391 G A
AR EBF1 NR3C2
5041161
chr17 71087785 rs76254397 G C no 5041162
chr17 71087801 rs187382800 C T no 5041163
Genes possibly regulated by vista25850[chr17:71087635-71087942]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 70642088 71088851 - SLC39A11 ENSG00000133195.7 71088851 0.68 1.0 16200 99091
chr17 71161151 71167185 + SSTR2 ENSG00000180616.4 71161151 0.87 0.99 16201 26791
Expression level of Genes
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miRNAs possibly regulated by vista25850[chr17:71087635-71087942]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results