EnhancerDB
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  3. vista25854[chr17:71152430-71152655]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25854[chr17:71152430-71152655]
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Tissue distribution of vista25854
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Transcription factor that possibly regulate vista25854[chr17:71152430-71152655]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 71152376 71152724 CTCF UCSC Txn Factor no Conserved 108290867
chr17 71152392 71152668 RAD21 UCSC Txn Factor no Conserved 108290869
chr17 71152398 71152703 SMC3 UCSC Txn Factor no Conserved 108290873
chr17 71152410 71152431 ZNF263 JASPAR yes 21289835
chr17 71152410 71152431 ZNF263 JASPAR yes 55853210
chr17 71152415 71152436 ZNF263 JASPAR yes 21289836
chr17 71152415 71152436 ZNF263 JASPAR yes 55853213
chr17 71152419 71152440 ZNF263 JASPAR yes 21289837
chr17 71152419 71152440 ZNF263 JASPAR yes 55853214
chr17 71152421 71152442 IRF1 JASPAR yes 21289838
chr17 71152421 71152442 IRF1 JASPAR yes 55853215
chr17 71152422 71152443 ZNF263 JASPAR yes 21289839
chr17 71152422 71152443 ZNF263 JASPAR yes 55853216
chr17 71152425 71152440 PRDM1 JASPAR yes 21289840
chr17 71152425 71152440 PRDM1 JASPAR yes 55853217
chr17 71152426 71152447 IRF1 JASPAR yes 21289841
chr17 71152426 71152447 IRF1 JASPAR yes 55853218
chr17 71152427 71152442 FOXP1 JASPAR yes 21289842
chr17 71152427 71152442 FOXP1 JASPAR yes 55853219
chr17 71152500 71152505 SP1 TRANSFAC yes 21289843
chr17 71152500 71152505 SP1 TRANSFAC yes 55853220
chr17 71152500 71152506 SP1 TRANSFAC yes 21289844
chr17 71152500 71152506 SP1 TRANSFAC yes 55853221
chr17 71152525 71152535 SREBF1 JASPAR yes 21289845
chr17 71152525 71152535 SREBF2 JASPAR yes 21289846
chr17 71152525 71152535 SREBF1 JASPAR yes 55853222
chr17 71152525 71152535 SREBF2 JASPAR yes 55853223
chr17 71152528 71152538 SP1 JASPAR yes 21289847
chr17 71152528 71152538 SP1 JASPAR yes 55853224
chr17 71152534 71152543 TFAP2A JASPAR yes 21289848
chr17 71152534 71152543 TFAP2A JASPAR yes 55853225
chr17 71152538 71152543 SP1 TRANSFAC yes 21289849
chr17 71152538 71152543 SP1 TRANSFAC yes 55853226
chr17 71152538 71152545 SP1 TRANSFAC yes 21289850
chr17 71152538 71152545 SP1 TRANSFAC yes 55853227
chr17 71152548 71152553 ETS2 TRANSFAC yes 21289851
chr17 71152548 71152553 ETS2 TRANSFAC yes 55853228
chr17 71152576 71152581 MYB TRANSFAC yes 21289852
chr17 71152576 71152581 MYB TRANSFAC yes 55853229
chr17 71152622 71152633 ELK4 JASPAR yes 21289853
chr17 71152622 71152633 ELK4 JASPAR yes 55853230
chr17 71152622 71152635 ELF3 JASPAR yes 21289854
chr17 71152622 71152635 ELF3 JASPAR yes 55853231
chr17 71152623 71152635 EHF JASPAR yes 21289855
chr17 71152623 71152635 ELF1 JASPAR yes 21289856
chr17 71152623 71152635 EHF JASPAR yes 55853232
chr17 71152623 71152635 ELF1 JASPAR yes 55853233
chr17 71152625 71152631 ETS1 JASPAR yes 21289857
chr17 71152625 71152631 SPI1 JASPAR yes 21289858
chr17 71152625 71152631 ETS1 JASPAR yes 55853234
chr17 71152625 71152631 SPI1 JASPAR yes 55853235
chr17 71152630 71152645 HNF4G JASPAR yes 21289859
chr17 71152630 71152645 HNF4G JASPAR yes 55853236
SNP sites on vista25854[chr17:71152430-71152655]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 71152479 rs146052356 C T
CTCF RAD21 SMC3
5041694
chr17 71152501 rs529552590 C G
CTCF RAD21 SMC3 SP1
5041695
Genes possibly regulated by vista25854[chr17:71152430-71152655]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 70642088 71088851 - SLC39A11 ENSG00000133195.7 71088851 0.68 1.0 16200 36421
chr17 71161151 71167185 + SSTR2 ENSG00000180616.4 71161151 0.87 0.99 16201 91504
chr17 71189129 71204646 + COG1 ENSG00000166685.7 71189129 0.6 1.0 16202 63526
chr17 71203492 71232892 - FAM104A ENSG00000133193.8 71232892 0.76 1.0 16203 19763
chr17 71228372 71245091 + C17orf80 ENSG00000141219.11 71228372 0.71 0.99 16204 24283
Expression level of Genes
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miRNAs possibly regulated by vista25854[chr17:71152430-71152655]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results