EnhancerDB
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  3. vista25860[chr17:71301216-71301553]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25860[chr17:71301216-71301553]
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Tissue distribution of vista25860
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Transcription factor that possibly regulate vista25860[chr17:71301216-71301553]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 71301062 71301476 GABPA UCSC Txn Factor no Conserved 108290981
chr17 71301069 71301657 ZNF263 UCSC Txn Factor no Conserved 108290984
chr17 71301129 71301779 CTCF UCSC Txn Factor no Conserved 108290993
chr17 71301160 71301571 STAT1 UCSC Txn Factor no Conserved 108291003
chr17 71301163 71301507 STAT3 UCSC Txn Factor no Conserved 108291005
chr17 71301266 71301530 RAD21 UCSC Txn Factor no Conserved 108291033
chr17 71301217 71301238 ZNF263 JASPAR yes 21290016
chr17 71301217 71301238 ZNF263 JASPAR yes 55860932
chr17 71301219 71301240 IRF1 JASPAR yes 21290017
chr17 71301219 71301240 IRF1 JASPAR yes 55860933
chr17 71301223 71301228 ETS2 TRANSFAC yes 21290018
chr17 71301223 71301228 ETS2 TRANSFAC yes 55860934
chr17 71301252 71301262 ELK1 JASPAR yes 21290019
chr17 71301252 71301262 ELK1 JASPAR yes 55860935
chr17 71301253 71301264 ETV2 JASPAR yes 21290020
chr17 71301253 71301264 ETV2 JASPAR yes 55860936
chr17 71301254 71301263 ELK4 JASPAR yes 21290021
chr17 71301254 71301263 ELK4 JASPAR yes 55860937
chr17 71301254 71301264 ELK1 JASPAR yes 21290022
chr17 71301254 71301264 ELK3 JASPAR yes 21290023
chr17 71301254 71301264 ERF JASPAR yes 21290024
chr17 71301254 71301264 ERG JASPAR yes 21290025
chr17 71301254 71301264 ETS1 JASPAR yes 21290026
chr17 71301254 71301264 ETV1 JASPAR yes 21290027
chr17 71301254 71301264 ETV3 JASPAR yes 21290028
chr17 71301254 71301264 ETV4 JASPAR yes 21290029
chr17 71301254 71301264 ETV5 JASPAR yes 21290030
chr17 71301254 71301264 ETV6 JASPAR yes 21290031
chr17 71301254 71301264 FEV JASPAR yes 21290032
chr17 71301254 71301264 FLI1 JASPAR yes 21290033
chr17 71301254 71301264 ELK1 JASPAR yes 55860938
chr17 71301254 71301264 ELK3 JASPAR yes 55860939
chr17 71301254 71301264 ERF JASPAR yes 55860940
chr17 71301254 71301264 ERG JASPAR yes 55860941
chr17 71301254 71301264 ETS1 JASPAR yes 55860942
chr17 71301254 71301264 ETV1 JASPAR yes 55860943
chr17 71301254 71301264 ETV3 JASPAR yes 55860944
chr17 71301254 71301264 ETV4 JASPAR yes 55860945
chr17 71301254 71301264 ETV5 JASPAR yes 55860946
chr17 71301254 71301264 ETV6 JASPAR yes 55860947
chr17 71301254 71301264 FEV JASPAR yes 55860948
chr17 71301254 71301264 FLI1 JASPAR yes 55860949
chr17 71301254 71301265 ELK4 JASPAR yes 21290034
chr17 71301254 71301265 FLI1 JASPAR yes 21290035
chr17 71301254 71301265 ELK4 JASPAR yes 55860950
chr17 71301254 71301265 FLI1 JASPAR yes 55860951
chr17 71301256 71301262 ETS1 JASPAR yes 21290036
chr17 71301256 71301262 SPI1 JASPAR yes 21290037
chr17 71301256 71301262 ETS1 JASPAR yes 55860952
chr17 71301256 71301262 SPI1 JASPAR yes 55860953
chr17 71301269 71301290 ZNF263 JASPAR yes 21290038
chr17 71301269 71301290 ZNF263 JASPAR yes 55860954
chr17 71301293 71301304 JUNB JASPAR yes 21290039
chr17 71301293 71301304 JUNB JASPAR yes 55860955
chr17 71301294 71301305 FOSL1 JASPAR yes 21290040
chr17 71301294 71301305 FOSL1 JASPAR yes 55860956
chr17 71301295 71301302 JUN TRANSFAC yes 21290041
chr17 71301295 71301302 JUN TRANSFAC yes 55860957
chr17 71301300 71301311 ESRRA JASPAR yes 21290042
chr17 71301300 71301311 ESRRB JASPAR yes 21290043
chr17 71301300 71301311 ESRRA JASPAR yes 55860958
chr17 71301300 71301311 ESRRB JASPAR yes 55860959
chr17 71301305 71301315 ELK1 JASPAR yes 21290044
chr17 71301305 71301315 ERG JASPAR yes 21290045
chr17 71301305 71301315 ETS1 JASPAR yes 21290046
chr17 71301305 71301315 ETV1 JASPAR yes 21290047
chr17 71301305 71301315 ETV3 JASPAR yes 21290048
chr17 71301305 71301315 ETV4 JASPAR yes 21290049
chr17 71301305 71301315 ETV5 JASPAR yes 21290050
chr17 71301305 71301315 FEV JASPAR yes 21290051
chr17 71301305 71301315 ELK1 JASPAR yes 55860960
chr17 71301305 71301315 ERG JASPAR yes 55860961
chr17 71301305 71301315 ETS1 JASPAR yes 55860962
chr17 71301305 71301315 ETV1 JASPAR yes 55860963
chr17 71301305 71301315 ETV3 JASPAR yes 55860964
chr17 71301305 71301315 ETV4 JASPAR yes 55860965
chr17 71301305 71301315 ETV5 JASPAR yes 55860966
chr17 71301305 71301315 FEV JASPAR yes 55860967
chr17 71301305 71301316 SPDEF JASPAR yes 21290052
chr17 71301305 71301316 SPDEF JASPAR yes 55860968
chr17 71301306 71301315 ELK4 JASPAR yes 21290053
chr17 71301306 71301315 ELK4 JASPAR yes 55860969
chr17 71301335 71301350 STAT1 JASPAR yes 21290054
chr17 71301335 71301350 STAT1 JASPAR yes 55860970
chr17 71301336 71301344 EHF JASPAR yes 21290055
chr17 71301336 71301344 EHF JASPAR yes 55860971
chr17 71301337 71301348 STAT1 JASPAR yes 21290056
chr17 71301337 71301348 STAT3 JASPAR yes 21290057
chr17 71301337 71301348 STAT1 JASPAR yes 55860972
chr17 71301337 71301348 STAT3 JASPAR yes 55860973
chr17 71301381 71301400 CTCF JASPAR yes 21290058
chr17 71301381 71301400 CTCF JASPAR yes 55860974
chr17 71301393 71301405 TAL1 JASPAR yes 21290059
chr17 71301393 71301405 TAL1 JASPAR yes 55860975
chr17 71301410 71301422 YY1 JASPAR yes 21290060
chr17 71301410 71301422 YY1 JASPAR yes 55860976
chr17 71301420 71301435 ZIC4 JASPAR yes 21290061
chr17 71301420 71301435 ZIC4 JASPAR yes 55860977
chr17 71301421 71301435 GLIS2 JASPAR yes 21290062
chr17 71301421 71301435 GLIS3 JASPAR yes 21290063
chr17 71301421 71301435 GLIS2 JASPAR yes 55860978
chr17 71301421 71301435 GLIS3 JASPAR yes 55860979
chr17 71301424 71301429 SP1 TRANSFAC yes 21290064
chr17 71301424 71301429 SP1 TRANSFAC yes 55860980
chr17 71301427 71301438 NFKB1 JASPAR yes 21290065
chr17 71301427 71301438 NFKB1 JASPAR yes 55860981
chr17 71301429 71301434 SP1 TRANSFAC yes 21290066
chr17 71301429 71301434 SP1 TRANSFAC yes 55860982
chr17 71301438 71301444 NFE2 TRANSFAC yes 21290067
chr17 71301438 71301444 NFE2 TRANSFAC yes 55860983
chr17 71301439 71301449 GCM2 JASPAR yes 21290068
chr17 71301439 71301449 GCM2 JASPAR yes 55860984
chr17 71301439 71301451 INSM1 JASPAR yes 21290069
chr17 71301439 71301451 INSM1 JASPAR yes 55860985
chr17 71301488 71301492 LFA1 TRANSFAC yes 21290070
chr17 71301488 71301492 LFA1 TRANSFAC yes 55860986
chr17 71301488 71301503 ZIC3 JASPAR yes 21290071
chr17 71301488 71301503 ZIC4 JASPAR yes 21290072
chr17 71301488 71301503 ZIC3 JASPAR yes 55860987
chr17 71301488 71301503 ZIC4 JASPAR yes 55860988
chr17 71301489 71301503 ZIC1 JASPAR yes 21290073
chr17 71301489 71301503 ZIC1 JASPAR yes 55860989
chr17 71301500 71301511 E2F6 JASPAR yes 21290074
chr17 71301500 71301511 E2F6 JASPAR yes 55860990
chr17 71301526 71301538 TEAD1 JASPAR yes 21290075
chr17 71301526 71301538 TEAD1 JASPAR yes 55860991
chr17 71301527 71301534 SPIB JASPAR yes 21290076
chr17 71301527 71301534 SPIB JASPAR yes 55860992
SNP sites on vista25860[chr17:71301216-71301553]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 71301281 rs562885540 G A
CTCF GABPA RAD21 STAT1 STAT3 ZNF263
5042777
chr17 71301283 rs149569665 C T
CTCF GABPA RAD21 STAT1 STAT3 ZNF263
5042778
chr17 71301333 rs17184573 G A
CTCF GABPA RAD21 STAT1 STAT3 ZNF263
5042779
chr17 71301374 rs116408409 G A,C
CTCF GABPA RAD21 STAT1 STAT3 ZNF263
5042780
chr17 71301386 rs144218360 C A
CTCF GABPA RAD21 STAT1 STAT3 ZNF263
5042781
chr17 71301452 rs56144519 G C,T
CTCF GABPA RAD21 STAT1 STAT3 ZNF263
5042782
chr17 71301464 rs180864840 C A
CTCF GABPA RAD21 STAT1 STAT3 ZNF263
5042783
chr17 71301471 rs56142452 A G
CTCF GABPA RAD21 STAT1 STAT3 ZNF263
5042784
Genes possibly regulated by vista25860[chr17:71301216-71301553]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 71203492 71232892 - FAM104A ENSG00000133193.8 71232892 0.76 1.0 16203 31676
chr17 71228372 71245091 + C17orf80 ENSG00000141219.11 71228372 0.71 0.99 16204 27156
chr17 71244588 71258491 - CPSF4L ENSG00000187959.5 71258491 0.8 1.0 16205 57275
chr17 71279763 71308314 - CDC42EP4 ENSG00000179604.8 71308314 0.69 1.0 16206 93239
Expression level of Genes
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miRNAs possibly regulated by vista25860[chr17:71301216-71301553]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results