EnhancerDB
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  3. vista25874[chr17:71557267-71557626]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25874[chr17:71557267-71557626]
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Tissue distribution of vista25874
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Transcription factor that possibly regulate vista25874[chr17:71557267-71557626]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 71557269 71557279 NFIA JASPAR yes 21290881
chr17 71557271 71557277 NFIC JASPAR yes 21290882
chr17 71557275 71557279 YY1 TRANSFAC yes 21290883
chr17 71557297 71557302 SP1 TRANSFAC yes 21290884
chr17 71557297 71557311 PLAG1 JASPAR yes 21290885
chr17 71557305 71557311 MAZ TRANSFAC yes 21290886
chr17 71557309 71557314 SP1 TRANSFAC yes 21290887
chr17 71557319 71557334 MEF2A JASPAR yes 21290888
chr17 71557320 71557335 MEF2C JASPAR yes 21290889
chr17 71557323 71557327 YY1 TRANSFAC yes 21290890
chr17 71557338 71557348 MSC JASPAR yes 21290891
chr17 71557347 71557352 SP1 TRANSFAC yes 21290892
chr17 71557349 71557359 TBX21 JASPAR yes 21290893
chr17 71557349 71557360 TBX20 JASPAR yes 21290894
chr17 71557349 71557360 TBX2 JASPAR yes 21290895
chr17 71557349 71557362 EOMES JASPAR yes 21290896
chr17 71557350 71557358 MGA JASPAR yes 21290897
chr17 71557350 71557358 TBX15 JASPAR yes 21290898
chr17 71557350 71557358 TBX1 JASPAR yes 21290899
chr17 71557350 71557358 TBX4 JASPAR yes 21290900
chr17 71557350 71557358 TBX5 JASPAR yes 21290901
chr17 71557350 71557360 TBR1 JASPAR yes 21290902
chr17 71557350 71557364 PLAG1 JASPAR yes 21290903
chr17 71557363 71557379 SOX4 JASPAR yes 21290904
chr17 71557364 71557379 SOX21 JASPAR yes 21290905
chr17 71557395 71557415 RREB1 JASPAR yes 21290906
chr17 71557396 71557411 RUNX2 JASPAR yes 21290907
chr17 71557397 71557417 RREB1 JASPAR yes 21290908
chr17 71557398 71557418 RREB1 JASPAR yes 21290909
chr17 71557400 71557420 RREB1 JASPAR yes 21290910
chr17 71557402 71557422 RREB1 JASPAR yes 21290911
chr17 71557407 71557417 SP1 JASPAR yes 21290912
chr17 71557412 71557421 ZEB1 JASPAR yes 21290913
chr17 71557412 71557424 NHLH1 JASPAR yes 21290914
chr17 71557413 71557423 NHLH1 JASPAR yes 21290915
chr17 71557413 71557423 TCF3 JASPAR yes 21290916
chr17 71557413 71557423 TCF4 JASPAR yes 21290917
chr17 71557415 71557420 USF2 TRANSFAC yes 21290918
chr17 71557422 71557426 ESR1 TRANSFAC yes 21290919
chr17 71557437 71557451 NR2F1 JASPAR yes 21290920
chr17 71557453 71557467 XBP1 JASPAR yes 21290921
chr17 71557464 71557474 MZF1 JASPAR yes 21290922
chr17 71557467 71557477 ETV6 JASPAR yes 21290923
chr17 71557467 71557488 ZNF263 JASPAR yes 21290924
chr17 71557468 71557489 ZNF263 JASPAR yes 21290925
chr17 71557469 71557474 ETS2 TRANSFAC yes 21290926
chr17 71557470 71557484 GLIS3 JASPAR yes 21290927
chr17 71557470 71557491 ZNF263 JASPAR yes 21290928
chr17 71557485 71557492 SPIB JASPAR yes 21290929
chr17 71557503 71557524 ZNF263 JASPAR yes 21290930
chr17 71557520 71557534 BATF3 JASPAR yes 21290931
chr17 71557523 71557531 CREB1 JASPAR yes 21290932
chr17 71557524 71557536 CREB1 JASPAR yes 21290933
chr17 71557525 71557530 ATF1 TRANSFAC yes 21290934
chr17 71557530 71557550 ESR1 JASPAR yes 21290935
chr17 71557540 71557545 USF2 TRANSFAC yes 21290936
chr17 71557559 71557573 CREB3 JASPAR yes 21290937
chr17 71557559 71557573 CREB3L1 JASPAR yes 21290938
chr17 71557560 71557574 XBP1 JASPAR yes 21290939
chr17 71557562 71557567 ATF1 TRANSFAC yes 21290940
chr17 71557577 71557592 RFX5 JASPAR yes 21290941
chr17 71557591 71557610 PAX5 JASPAR yes 21290942
chr17 71557601 71557620 RFX2 JASPAR yes 21290943
SNP sites on vista25874[chr17:71557267-71557626]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 71557388 rs67747957 C T no 5044051
chr17 71557512 rs191743519 G C
ZNF263
5044052
chr17 71557566 rs561806819 C T
ATF1 CREB3 CREB3L1 XBP1
5044053
Genes possibly regulated by vista25874[chr17:71557267-71557626]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 71330523 71640228 - SDK2 ENSG00000069188.12 71640228 0.93 0.97 16207 17398
Expression level of Genes
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miRNAs possibly regulated by vista25874[chr17:71557267-71557626]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results