EnhancerDB
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  3. vista25876[chr17:71603632-71603970]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25876[chr17:71603632-71603970]
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Tissue distribution of vista25876
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Transcription factor that possibly regulate vista25876[chr17:71603632-71603970]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 71603637 71603649 IRF1 JASPAR yes 21290993
chr17 71603657 71603662 ETS2 TRANSFAC yes 21290994
chr17 71603657 71603669 INSM1 JASPAR yes 21290995
chr17 71603670 71603681 E2F6 JASPAR yes 21290996
chr17 71603671 71603676 SP1 TRANSFAC yes 21290997
chr17 71603679 71603688 SNAI2 JASPAR yes 21290998
chr17 71603679 71603689 ID4 JASPAR yes 21290999
chr17 71603679 71603689 MSC JASPAR yes 21291000
chr17 71603679 71603689 TCF3 JASPAR yes 21291001
chr17 71603679 71603689 TCF4 JASPAR yes 21291002
chr17 71603682 71603690 TBX15 JASPAR yes 21291003
chr17 71603682 71603690 TBX1 JASPAR yes 21291004
chr17 71603682 71603690 TBX4 JASPAR yes 21291005
chr17 71603682 71603690 TBX5 JASPAR yes 21291006
chr17 71603715 71603733 ESR1 JASPAR yes 21291007
chr17 71603718 71603723 SP1 TRANSFAC yes 21291008
chr17 71603737 71603757 PPARG JASPAR yes 21291009
chr17 71603739 71603757 ESR2 JASPAR yes 21291010
chr17 71603740 71603755 ESR2 JASPAR yes 21291011
chr17 71603743 71603757 TLX1 JASPAR yes 21291012
chr17 71603759 71603770 USF1 JASPAR yes 21291013
chr17 71603759 71603770 USF2 JASPAR yes 21291014
chr17 71603760 71603767 USF2 TRANSFAC yes 21291015
chr17 71603762 71603767 USF2 TRANSFAC yes 21291016
chr17 71603779 71603788 THAP1 JASPAR yes 21291017
chr17 71603781 71603796 ESR2 JASPAR yes 21291018
chr17 71603782 71603786 LFA1 TRANSFAC yes 21291019
chr17 71603809 71603816 NFATC2 JASPAR yes 21291020
chr17 71603809 71603820 STAT3 JASPAR yes 21291021
chr17 71603810 71603829 CTCF JASPAR yes 21291022
chr17 71603828 71603832 LFA1 TRANSFAC yes 21291023
chr17 71603843 71603858 HNF4G JASPAR yes 21291024
chr17 71603844 71603859 HNF4A JASPAR yes 21291025
SNP sites on vista25876[chr17:71603632-71603970]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 71603649 rs185530110 G A
IRF1
5044471
chr17 71603687 rs570907317 G T
ID4 MSC SNAI2 TBX1 TBX15 TBX4 TBX5 TCF3 TCF4
5044472
chr17 71603779 rs568617569 T C
THAP1
5044473
chr17 71603824 rs117944288 T C
CTCF
5044474
chr17 71603832 rs115526219 C A,T
LFA1
5044475
Genes possibly regulated by vista25876[chr17:71603632-71603970]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 71330523 71640228 - SDK2 ENSG00000069188.12 71640228 0.93 0.97 16207 63742
Expression level of Genes
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miRNAs possibly regulated by vista25876[chr17:71603632-71603970]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results