EnhancerDB
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  3. vista25878[chr17:71639437-71639585]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25878[chr17:71639437-71639585]
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Tissue distribution of vista25878
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Transcription factor that possibly regulate vista25878[chr17:71639437-71639585]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 71639448 71639460 HINFP JASPAR yes 21291170
chr17 71639459 71639469 SP1 JASPAR yes 21291171
chr17 71639465 71639475 SP1 JASPAR yes 21291172
chr17 71639466 71639474 SP1 TRANSFAC yes 21291173
chr17 71639466 71639475 SP1 TRANSFAC yes 21291174
chr17 71639466 71639476 SP1 JASPAR yes 21291175
chr17 71639467 71639472 SP1 TRANSFAC yes 21291176
chr17 71639468 71639473 SP1 TRANSFAC yes 21291177
chr17 71639468 71639474 SP1 TRANSFAC yes 21291178
chr17 71639475 71639495 RREB1 JASPAR yes 21291179
chr17 71639479 71639499 RREB1 JASPAR yes 21291180
chr17 71639487 71639508 ZNF263 JASPAR yes 21291181
chr17 71639488 71639494 ZNF354C JASPAR yes 21291182
chr17 71639496 71639506 SP1 JASPAR yes 21291183
chr17 71639516 71639537 ZNF263 JASPAR yes 21291184
chr17 71639527 71639546 CTCF JASPAR yes 21291185
chr17 71639528 71639538 SP1 JASPAR yes 21291186
chr17 71639530 71639544 GLIS2 JASPAR yes 21291187
chr17 71639530 71639544 ZIC1 JASPAR yes 21291188
chr17 71639530 71639545 ZIC3 JASPAR yes 21291189
chr17 71639530 71639545 ZIC4 JASPAR yes 21291190
chr17 71639538 71639543 SP1 TRANSFAC yes 21291191
chr17 71639539 71639551 HINFP JASPAR yes 21291192
chr17 71639542 71639546 H4TF2 TRANSFAC yes 21291193
chr17 71639558 71639569 ESRRA JASPAR yes 21291194
chr17 71639558 71639569 ESRRB JASPAR yes 21291195
chr17 71639564 71639579 TFAP2C JASPAR yes 21291196
chr17 71639565 71639579 TLX1 JASPAR yes 21291197
SNP sites on vista25878[chr17:71639437-71639585]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 71639505 rs562605287 G A
SP1 ZNF263
5044668
chr17 71639535 rs76380229 C T
CTCF GLIS2 SP1 ZIC1 ZIC3 ZIC4 ZNF263
5044669
Genes possibly regulated by vista25878[chr17:71639437-71639585]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 71330523 71640228 - SDK2 ENSG00000069188.12 71640228 0.93 0.97 16207 99357
Expression level of Genes
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miRNAs possibly regulated by vista25878[chr17:71639437-71639585]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results