EnhancerDB
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  3. vista25879[chr17:71708165-71708381]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25879[chr17:71708165-71708381]
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Tissue distribution of vista25879
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Transcription factor that possibly regulate vista25879[chr17:71708165-71708381]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 71708163 71708174 NRF1 JASPAR yes 21291198
chr17 71708163 71708174 NRF1 JASPAR yes 55881775
chr17 71708164 71708173 SNAI2 JASPAR yes 21291199
chr17 71708164 71708173 SNAI2 JASPAR yes 55881776
chr17 71708164 71708174 ID4 JASPAR yes 21291200
chr17 71708164 71708174 TCF3 JASPAR yes 21291201
chr17 71708164 71708174 TCF4 JASPAR yes 21291202
chr17 71708164 71708174 ID4 JASPAR yes 55881777
chr17 71708164 71708174 TCF3 JASPAR yes 55881778
chr17 71708164 71708174 TCF4 JASPAR yes 55881779
chr17 71708179 71708183 NFE TRANSFAC yes 21291203
chr17 71708179 71708183 NFE TRANSFAC yes 55881780
chr17 71708180 71708192 INSM1 JASPAR yes 21291204
chr17 71708180 71708192 INSM1 JASPAR yes 55881781
chr17 71708186 71708190 LFA1 TRANSFAC yes 21291205
chr17 71708186 71708190 LFA1 TRANSFAC yes 55881782
chr17 71708209 71708221 TAL1 JASPAR yes 21291206
chr17 71708209 71708221 TAL1 JASPAR yes 55881783
chr17 71708210 71708222 PKNOX1 JASPAR yes 21291207
chr17 71708210 71708222 TGIF1 JASPAR yes 21291208
chr17 71708210 71708222 PKNOX1 JASPAR yes 55881784
chr17 71708210 71708222 TGIF1 JASPAR yes 55881785
chr17 71708211 71708221 MYF6 JASPAR yes 21291209
chr17 71708211 71708221 NEUROG2 JASPAR yes 21291210
chr17 71708211 71708221 MYF6 JASPAR yes 55881786
chr17 71708211 71708221 NEUROG2 JASPAR yes 55881787
chr17 71708211 71708223 TAL1 JASPAR yes 21291211
chr17 71708211 71708223 TAL1 JASPAR yes 55881788
chr17 71708219 71708232 ZBTB18 JASPAR yes 21291212
chr17 71708219 71708232 ZBTB18 JASPAR yes 55881789
chr17 71708227 71708231 LFA1 TRANSFAC yes 21291213
chr17 71708227 71708231 LFA1 TRANSFAC yes 55881790
chr17 71708285 71708289 H4TF2 TRANSFAC yes 21291214
chr17 71708285 71708289 H4TF2 TRANSFAC yes 55881791
chr17 71708291 71708302 E2F4 JASPAR yes 21291215
chr17 71708291 71708302 E2F6 JASPAR yes 21291216
chr17 71708291 71708302 E2F4 JASPAR yes 55881792
chr17 71708291 71708302 E2F6 JASPAR yes 55881793
chr17 71708292 71708303 E2F1 JASPAR yes 21291217
chr17 71708292 71708303 E2F1 JASPAR yes 55881794
chr17 71708317 71708331 EBF1 JASPAR yes 21291218
chr17 71708317 71708331 EBF1 JASPAR yes 55881795
chr17 71708347 71708356 NFIX JASPAR yes 21291219
chr17 71708347 71708356 NFIX JASPAR yes 55881796
chr17 71708349 71708355 NFIC JASPAR yes 21291220
chr17 71708349 71708355 NFIC JASPAR yes 55881797
chr17 71708355 71708363 MEIS2 JASPAR yes 21291221
chr17 71708355 71708363 MEIS3 JASPAR yes 21291222
chr17 71708355 71708363 MEIS2 JASPAR yes 55881798
chr17 71708355 71708363 MEIS3 JASPAR yes 55881799
chr17 71708356 71708360 NFE TRANSFAC yes 21291223
chr17 71708356 71708360 NFE TRANSFAC yes 55881800
chr17 71708366 71708370 ESR1 TRANSFAC yes 21291224
chr17 71708366 71708370 ESR1 TRANSFAC yes 55881801
chr17 71708367 71708377 SREBF2 JASPAR yes 21291225
chr17 71708367 71708377 SREBF2 JASPAR yes 55881802
chr17 71708376 71708380 ESR1 TRANSFAC yes 21291226
chr17 71708376 71708380 ESR1 TRANSFAC yes 55881803
SNP sites on vista25879[chr17:71708165-71708381]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 71708170 rs9895910 G T
ID4 NRF1 SNAI2 TCF3 TCF4
5045199
chr17 71708298 rs77961364 C T
E2F1 E2F4 E2F6
5045200
chr17 71708325 rs9897834 C T
EBF1
5045201
chr17 71708349 rs187037701 A C
NFIC NFIX
5045202
Genes possibly regulated by vista25879[chr17:71708165-71708381]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 71330523 71640228 - SDK2 ENSG00000069188.12 71640228 0.93 0.97 16207 32063
Expression level of Genes
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miRNAs possibly regulated by vista25879[chr17:71708165-71708381]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results