EnhancerDB
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  3. vista25889[chr17:72190680-72190789]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25889[chr17:72190680-72190789]
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Tissue distribution of vista25889
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Transcription factor that possibly regulate vista25889[chr17:72190680-72190789]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72190682 72190691 NKX3-2 JASPAR yes 21291540
chr17 72190682 72190691 NKX3-2 JASPAR yes 55900015
chr17 72190682 72190692 NKX2-3 JASPAR yes 21291541
chr17 72190682 72190692 NKX2-3 JASPAR yes 55900016
chr17 72190690 72190694 ESR1 TRANSFAC yes 21291542
chr17 72190690 72190694 ESR1 TRANSFAC yes 55900017
chr17 72190695 72190703 MEIS2 JASPAR yes 21291543
chr17 72190695 72190703 MEIS3 JASPAR yes 21291544
chr17 72190695 72190703 MEIS2 JASPAR yes 55900018
chr17 72190695 72190703 MEIS3 JASPAR yes 55900019
chr17 72190702 72190713 ELK4 JASPAR yes 21291545
chr17 72190702 72190713 FLI1 JASPAR yes 21291546
chr17 72190702 72190713 ELK4 JASPAR yes 55900020
chr17 72190702 72190713 FLI1 JASPAR yes 55900021
chr17 72190703 72190713 ETV6 JASPAR yes 21291547
chr17 72190703 72190713 ETV6 JASPAR yes 55900022
chr17 72190703 72190716 ELF1 JASPAR yes 21291548
chr17 72190703 72190716 ELF1 JASPAR yes 55900023
chr17 72190704 72190711 SPI1 JASPAR yes 21291549
chr17 72190704 72190711 SPI1 JASPAR yes 55900024
chr17 72190704 72190712 EHF JASPAR yes 21291550
chr17 72190704 72190712 EHF JASPAR yes 55900025
chr17 72190706 72190720 SPIC JASPAR yes 21291551
chr17 72190706 72190720 SPIC JASPAR yes 55900026
chr17 72190715 72190726 HOXC13 JASPAR yes 21291552
chr17 72190715 72190726 HOXC13 JASPAR yes 55900027
chr17 72190718 72190721 MYB TRANSFAC yes 21291553
chr17 72190718 72190721 MYB TRANSFAC yes 55900028
chr17 72190719 72190737 TP73 JASPAR yes 21291554
chr17 72190719 72190737 TP73 JASPAR yes 55900029
chr17 72190729 72190750 ZNF263 JASPAR yes 21291555
chr17 72190729 72190750 ZNF263 JASPAR yes 55900030
chr17 72190733 72190750 RXRA JASPAR yes 21291556
chr17 72190733 72190750 RXRA JASPAR yes 55900031
chr17 72190735 72190756 ZNF263 JASPAR yes 21291557
chr17 72190735 72190756 ZNF263 JASPAR yes 55900032
chr17 72190737 72190747 MZF1 JASPAR yes 21291558
chr17 72190737 72190747 MZF1 JASPAR yes 55900033
chr17 72190738 72190744 MZF1 JASPAR yes 21291559
chr17 72190738 72190744 MZF1 JASPAR yes 55900034
chr17 72190739 72190749 SP1 JASPAR yes 21291560
chr17 72190739 72190749 SP1 JASPAR yes 55900035
chr17 72190740 72190750 SP1 JASPAR yes 21291561
chr17 72190740 72190750 SP1 JASPAR yes 55900036
chr17 72190769 72190777 HOXA5 JASPAR yes 21291562
chr17 72190769 72190777 HOXA5 JASPAR yes 55900037
chr17 72190774 72190783 SRY JASPAR yes 21291563
chr17 72190774 72190783 SRY JASPAR yes 55900038
chr17 72190778 72190784 TCF4 TRANSFAC yes 21291564
chr17 72190778 72190784 TCF4 TRANSFAC yes 55900039
SNP sites on vista25889[chr17:72190680-72190789]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72190699 rs182388801 A G
MEIS2 MEIS3
5047894
chr17 72190739 rs77428389 T G
MZF1 RXRA SP1 ZNF263
5047895
Genes possibly regulated by vista25889[chr17:72190680-72190789]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72199721 72206794 + RPL38 ENSG00000172809.8 72199721 0.64 1.0 16208 91068
chr17 72209653 72258155 + TTYH2 ENSG00000141540.6 72209653 0.79 1.0 16209 81136
chr17 72270386 72311023 + DNAI2 ENSG00000171595.9 72270386 0.96 1.0 16210 20403
Expression level of Genes
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miRNAs possibly regulated by vista25889[chr17:72190680-72190789]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results