EnhancerDB
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  3. vista25890[chr17:72235423-72235656]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25890[chr17:72235423-72235656]
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Tissue distribution of vista25890
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Transcription factor that possibly regulate vista25890[chr17:72235423-72235656]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72235428 72235434 YY1 JASPAR yes 21291565
chr17 72235468 72235489 ZNF263 JASPAR yes 21291566
chr17 72235471 72235492 ZNF263 JASPAR yes 21291567
chr17 72235472 72235493 ZNF263 JASPAR yes 21291568
chr17 72235473 72235483 MAX JASPAR yes 21291569
chr17 72235473 72235485 HES5 JASPAR yes 21291570
chr17 72235473 72235485 HES7 JASPAR yes 21291571
chr17 72235474 72235484 BHLHE40 JASPAR yes 21291572
chr17 72235474 72235484 HEY1 JASPAR yes 21291573
chr17 72235474 72235484 HEY2 JASPAR yes 21291574
chr17 72235474 72235484 MAX JASPAR yes 21291575
chr17 72235474 72235484 MNT JASPAR yes 21291576
chr17 72235474 72235484 TFE3 JASPAR yes 21291577
chr17 72235474 72235484 TFEB JASPAR yes 21291578
chr17 72235476 72235481 MYC TRANSFAC yes 21291579
chr17 72235476 72235481 USF1 TRANSFAC yes 21291580
chr17 72235476 72235481 USF2 TRANSFAC yes 21291581
chr17 72235476 72235483 USF1 JASPAR yes 21291582
chr17 72235479 72235489 ZNF740 JASPAR yes 21291583
chr17 72235480 72235485 TFAP2A TRANSFAC yes 21291584
chr17 72235480 72235486 MZF1 JASPAR yes 21291585
chr17 72235480 72235490 SP1 JASPAR yes 21291586
chr17 72235480 72235501 ZNF263 JASPAR yes 21291587
chr17 72235481 72235490 SP1 TRANSFAC yes 21291588
chr17 72235482 72235488 MAZ TRANSFAC yes 21291589
chr17 72235483 72235493 MZF1 JASPAR yes 21291590
chr17 72235487 72235492 ETS2 TRANSFAC yes 21291591
chr17 72235489 72235503 JUN JASPAR yes 21291592
chr17 72235491 72235502 BATF JASPAR yes 21291593
chr17 72235492 72235503 FOSL2 JASPAR yes 21291594
chr17 72235492 72235503 JUNB JASPAR yes 21291595
chr17 72235493 72235504 FOS JASPAR yes 21291596
chr17 72235493 72235504 FOSL1 JASPAR yes 21291597
chr17 72235493 72235504 JUND JASPAR yes 21291598
chr17 72235493 72235504 NFE2 JASPAR yes 21291599
chr17 72235494 72235503 JDP2 JASPAR yes 21291600
chr17 72235495 72235502 JUN TRANSFAC yes 21291601
chr17 72235528 72235549 ZNF263 JASPAR yes 21291602
chr17 72235533 72235543 SP1 JASPAR yes 21291603
chr17 72235545 72235549 YY1 TRANSFAC yes 21291604
chr17 72235577 72235582 ATF1 TRANSFAC yes 21291605
chr17 72235598 72235609 CEBPB JASPAR yes 21291606
chr17 72235599 72235609 CEBPB JASPAR yes 21291607
chr17 72235599 72235609 CEBPD JASPAR yes 21291608
chr17 72235599 72235609 CEBPE JASPAR yes 21291609
chr17 72235599 72235609 CEBPG JASPAR yes 21291610
chr17 72235599 72235610 CEBPA JASPAR yes 21291611
chr17 72235607 72235628 IRF1 JASPAR yes 21291612
chr17 72235609 72235624 STAT2 JASPAR yes 21291613
chr17 72235610 72235624 SPI1 JASPAR yes 21291614
chr17 72235613 72235628 FOXP1 JASPAR yes 21291615
chr17 72235614 72235625 FOXP2 JASPAR yes 21291616
chr17 72235628 72235647 CTCF JASPAR yes 21291617
chr17 72235640 72235651 CDX2 JASPAR yes 21291618
chr17 72235642 72235651 CDX1 JASPAR yes 21291619
chr17 72235642 72235652 HOXC10 JASPAR yes 21291620
SNP sites on vista25890[chr17:72235423-72235656]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72235465 rs12150474 G A no 5048204
chr17 72235537 rs577278141 C G,T
SP1 ZNF263
5048205
chr17 72235558 rs56066408 C T no 5048206
chr17 72235561 rs12452652 C A no 5048207
Genes possibly regulated by vista25890[chr17:72235423-72235656]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72199721 72206794 + RPL38 ENSG00000172809.8 72199721 0.64 1.0 16208 64298
chr17 72209653 72258155 + TTYH2 ENSG00000141540.6 72209653 0.79 1.0 16209 74230
chr17 72270386 72311023 + DNAI2 ENSG00000171595.9 72270386 0.96 1.0 16210 65270
chr17 72322349 72351959 + KIF19 ENSG00000196169.10 72322349 0.95 1.0 16211 13307
Expression level of Genes
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miRNAs possibly regulated by vista25890[chr17:72235423-72235656]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results