EnhancerDB
  1. Home
  2. Enhancers
  3. vista25893[chr17:72247418-72247796]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25893[chr17:72247418-72247796]
Back to top
Tissue distribution of vista25893
Back to top
Transcription factor that possibly regulate vista25893[chr17:72247418-72247796]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72247419 72247439 RREB1 JASPAR yes 21291692
chr17 72247421 72247436 RUNX2 JASPAR yes 21291693
chr17 72247434 72247454 RREB1 JASPAR yes 21291694
chr17 72247445 72247459 MTF1 JASPAR yes 21291695
chr17 72247452 72247462 MAX JASPAR yes 21291696
chr17 72247454 72247474 TP63 JASPAR yes 21291697
chr17 72247455 72247473 TP53 JASPAR yes 21291698
chr17 72247455 72247473 TP63 JASPAR yes 21291699
chr17 72247455 72247473 TP73 JASPAR yes 21291700
chr17 72247456 72247471 TP53 JASPAR yes 21291701
chr17 72247457 72247472 TP53 JASPAR yes 21291702
chr17 72247462 72247472 MAX JASPAR yes 21291703
chr17 72247467 72247482 RUNX2 JASPAR yes 21291704
chr17 72247468 72247488 RREB1 JASPAR yes 21291705
chr17 72247470 72247490 RREB1 JASPAR yes 21291706
chr17 72247491 72247511 RREB1 JASPAR yes 21291707
chr17 72247493 72247513 RREB1 JASPAR yes 21291708
chr17 72247496 72247510 PLAG1 JASPAR yes 21291709
chr17 72247500 72247514 GLIS2 JASPAR yes 21291710
chr17 72247500 72247514 GLIS3 JASPAR yes 21291711
chr17 72247504 72247514 ZNF740 JASPAR yes 21291712
chr17 72247508 72247528 RREB1 JASPAR yes 21291713
chr17 72247512 72247532 RREB1 JASPAR yes 21291714
chr17 72247516 72247536 RREB1 JASPAR yes 21291715
chr17 72247517 72247531 GLIS2 JASPAR yes 21291716
chr17 72247517 72247531 GLIS3 JASPAR yes 21291717
chr17 72247519 72247529 ZNF740 JASPAR yes 21291718
chr17 72247519 72247539 RREB1 JASPAR yes 21291719
chr17 72247521 72247531 ZNF740 JASPAR yes 21291720
chr17 72247521 72247541 RREB1 JASPAR yes 21291721
chr17 72247539 72247551 MEF2A JASPAR yes 21291722
chr17 72247539 72247551 MEF2D JASPAR yes 21291723
chr17 72247541 72247545 YY1 TRANSFAC yes 21291724
chr17 72247545 72247549 TEAD2 TRANSFAC yes 21291725
chr17 72247545 72247550 TBP TRANSFAC yes 21291726
chr17 72247572 72247581 HIC2 JASPAR yes 21291727
chr17 72247572 72247582 NFIA JASPAR yes 21291728
chr17 72247573 72247582 NFIX JASPAR yes 21291729
chr17 72247574 72247580 NFIC JASPAR yes 21291730
chr17 72247597 72247608 SPDEF JASPAR yes 21291731
chr17 72247603 72247618 ESR2 JASPAR yes 21291732
chr17 72247612 72247620 CREB1 JASPAR yes 21291733
chr17 72247627 72247639 YY1 JASPAR yes 21291734
chr17 72247644 72247648 NFE TRANSFAC yes 21291735
chr17 72247645 72247666 ZNF263 JASPAR yes 21291736
chr17 72247647 72247668 ZNF263 JASPAR yes 21291737
chr17 72247651 72247672 ZNF263 JASPAR yes 21291738
chr17 72247654 72247675 ZNF263 JASPAR yes 21291739
chr17 72247656 72247670 SPI1 JASPAR yes 21291740
chr17 72247656 72247670 SPIC JASPAR yes 21291741
chr17 72247672 72247681 PITX3 JASPAR yes 21291742
chr17 72247672 72247682 GSC2 JASPAR yes 21291743
chr17 72247672 72247682 GSC JASPAR yes 21291744
chr17 72247673 72247681 OTX1 JASPAR yes 21291745
chr17 72247673 72247690 BCL6B JASPAR yes 21291746
chr17 72247677 72247683 MZF1 JASPAR yes 21291747
chr17 72247688 72247698 NFIA JASPAR yes 21291748
chr17 72247690 72247696 NFIC JASPAR yes 21291749
chr17 72247704 72247714 TFAP4 JASPAR yes 21291750
chr17 72247712 72247728 ZNF143 JASPAR yes 21291751
chr17 72247723 72247744 IRF1 JASPAR yes 21291752
chr17 72247725 72247740 PRDM1 JASPAR yes 21291753
chr17 72247727 72247731 YY1 TRANSFAC yes 21291754
chr17 72247763 72247767 H4TF2 TRANSFAC yes 21291755
chr17 72247767 72247773 NFE2 TRANSFAC yes 21291756
chr17 72247770 72247776 SP1 TRANSFAC yes 21291757
SNP sites on vista25893[chr17:72247418-72247796]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72247426 rs59683399 T C
RREB1 RUNX2
5048247
chr17 72247458 rs539496160 C G
MAX MTF1 TP53 TP63 TP73
5048248
chr17 72247478 rs370672531 G T
RREB1 RUNX2
5048249
chr17 72247498 rs79456493 T G
PLAG1 RREB1
5048250
chr17 72247516 rs9899499 A G,T
RREB1
5048251
chr17 72247523 rs575179759 T G
GLIS2 GLIS3 RREB1 ZNF740
5048252
chr17 72247525 rs59240044 G C,T
GLIS2 GLIS3 RREB1 ZNF740
5048253
chr17 72247528 rs9897077 G T
GLIS2 GLIS3 RREB1 ZNF740
5048254
chr17 72247530 rs577790991 T G
GLIS2 GLIS3 RREB1 ZNF740
5048255
chr17 72247791 rs565446021 C T no 5048256
chr17 72247795 rs35417837 T TC no 5048257
Genes possibly regulated by vista25893[chr17:72247418-72247796]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72199721 72206794 + RPL38 ENSG00000172809.8 72199721 0.64 1.0 16208 52303
chr17 72209653 72258155 + TTYH2 ENSG00000141540.6 72209653 0.79 1.0 16209 62235
chr17 72270386 72311023 + DNAI2 ENSG00000171595.9 72270386 0.96 1.0 16210 77410
chr17 72322349 72351959 + KIF19 ENSG00000196169.10 72322349 0.95 1.0 16211 25447
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25893[chr17:72247418-72247796]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results