EnhancerDB
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  3. vista25896[chr17:72292734-72292946]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25896[chr17:72292734-72292946]
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Tissue distribution of vista25896
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Transcription factor that possibly regulate vista25896[chr17:72292734-72292946]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72292605 72293082 GATA1 UCSC Txn Factor no Conserved 108291470
chr17 72292728 72293122 CTCF UCSC Txn Factor no Conserved 108291490
chr17 72292729 72292963 TAL1 UCSC Txn Factor no Conserved 108291491
chr17 72292745 72292975 TEAD4 UCSC Txn Factor no Conserved 108291496
chr17 72292773 72293044 RAD21 UCSC Txn Factor no Conserved 108291503
chr17 72292738 72292743 MYC TRANSFAC yes 21291954
chr17 72292738 72292743 MYC TRANSFAC yes 55902675
chr17 72292747 72292755 DLX6 JASPAR yes 21291955
chr17 72292747 72292755 MSX1 JASPAR yes 21291956
chr17 72292747 72292755 DLX6 JASPAR yes 55902676
chr17 72292747 72292755 MSX1 JASPAR yes 55902677
chr17 72292770 72292783 EOMES JASPAR yes 21291957
chr17 72292770 72292783 EOMES JASPAR yes 55902678
chr17 72292772 72292782 TBR1 JASPAR yes 21291958
chr17 72292772 72292782 TBR1 JASPAR yes 55902679
chr17 72292772 72292783 TBX2 JASPAR yes 21291959
chr17 72292772 72292783 TBX2 JASPAR yes 55902680
chr17 72292774 72292782 MGA JASPAR yes 21291960
chr17 72292774 72292782 MGA JASPAR yes 55902681
chr17 72292828 72292836 GATA5 JASPAR yes 21291961
chr17 72292828 72292836 GATA5 JASPAR yes 55902682
chr17 72292851 72292855 ESR1 TRANSFAC yes 21291962
chr17 72292851 72292855 ESR1 TRANSFAC yes 55902683
chr17 72292873 72292877 LFA1 TRANSFAC yes 21291963
chr17 72292873 72292877 LFA1 TRANSFAC yes 55902684
chr17 72292878 72292885 JUN TRANSFAC yes 21291964
chr17 72292878 72292885 SP1 TRANSFAC yes 21291965
chr17 72292878 72292885 JUN TRANSFAC yes 55902685
chr17 72292878 72292885 SP1 TRANSFAC yes 55902686
chr17 72292880 72292894 TCF7L2 JASPAR yes 21291966
chr17 72292880 72292894 TCF7L2 JASPAR yes 55902687
chr17 72292893 72292914 ZNF263 JASPAR yes 21291967
chr17 72292893 72292914 ZNF263 JASPAR yes 55902688
chr17 72292907 72292926 CTCF JASPAR yes 21291968
chr17 72292907 72292926 CTCF JASPAR yes 55902689
chr17 72292918 72292930 E2F1 JASPAR yes 21291969
chr17 72292918 72292930 E2F1 JASPAR yes 55902690
SNP sites on vista25896[chr17:72292734-72292946]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72292752 rs554290241 T C
CTCF DLX6 GATA1 MSX1 TAL1 TEAD4
5048429
chr17 72292756 rs111434543 A G
CTCF GATA1 TAL1 TEAD4
5048430
chr17 72292852 rs147196022 G A
CTCF ESR1 GATA1 RAD21 TAL1 TEAD4
5048431
Genes possibly regulated by vista25896[chr17:72292734-72292946]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72199721 72206794 + RPL38 ENSG00000172809.8 72199721 0.64 1.0 16208 6987
chr17 72209653 72258155 + TTYH2 ENSG00000141540.6 72209653 0.79 1.0 16209 16919
chr17 72270386 72311023 + DNAI2 ENSG00000171595.9 72270386 0.96 1.0 16210 77652
chr17 72322349 72351959 + KIF19 ENSG00000196169.10 72322349 0.95 1.0 16211 70597
chr17 72346906 72348271 - AC103809.2 ENSG00000268626.1 72348271 1.0 0.0 16212 44675
chr17 72352555 72358085 - BTBD17 ENSG00000204347.3 72358085 0.87 1.0 16213 34861
chr17 72363546 72368761 + GPR142 ENSG00000257008.2 72363546 0.94 0.0 16214 29400
Expression level of Genes
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miRNAs possibly regulated by vista25896[chr17:72292734-72292946]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results