EnhancerDB
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  3. vista25899[chr17:72391130-72391401]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25899[chr17:72391130-72391401]
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Tissue distribution of vista25899
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Transcription factor that possibly regulate vista25899[chr17:72391130-72391401]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72391242 72391481 GATA3 UCSC Txn Factor no Conserved 108291564
chr17 72391300 72391497 FOXA1 UCSC Txn Factor no Conserved 108291567
chr17 72391114 72391131 RXRA JASPAR yes 21292037
chr17 72391114 72391131 RXRA JASPAR yes 55906680
chr17 72391129 72391139 SREBF2 JASPAR yes 21292038
chr17 72391129 72391139 SREBF2 JASPAR yes 55906682
chr17 72391135 72391149 GATA2 JASPAR yes 21292039
chr17 72391135 72391149 GATA2 JASPAR yes 55906683
chr17 72391141 72391145 NFE TRANSFAC yes 21292040
chr17 72391141 72391145 NFE TRANSFAC yes 55906684
chr17 72391141 72391146 GATA1 TRANSFAC yes 21292041
chr17 72391141 72391146 GATA1 TRANSFAC yes 55906685
chr17 72391141 72391147 GATA3 JASPAR yes 21292042
chr17 72391141 72391147 GATA3 JASPAR yes 55906686
chr17 72391155 72391159 NFE TRANSFAC yes 21292043
chr17 72391155 72391159 NFE TRANSFAC yes 55906687
chr17 72391156 72391161 GATA2 JASPAR yes 21292044
chr17 72391156 72391161 GATA2 JASPAR yes 55906688
chr17 72391160 72391174 EBF1 JASPAR yes 21292045
chr17 72391160 72391174 EBF1 JASPAR yes 55906689
chr17 72391162 72391173 EBF1 JASPAR yes 21292046
chr17 72391162 72391173 EBF1 JASPAR yes 55906690
chr17 72391170 72391183 ELF1 JASPAR yes 21292047
chr17 72391170 72391183 ELF1 JASPAR yes 55906691
chr17 72391171 72391183 ELF1 JASPAR yes 21292048
chr17 72391171 72391183 ELF1 JASPAR yes 55906692
chr17 72391172 72391183 ELF5 JASPAR yes 21292049
chr17 72391172 72391183 ELF5 JASPAR yes 55906693
chr17 72391173 72391180 ETS1 TRANSFAC yes 21292050
chr17 72391173 72391180 ETS1 TRANSFAC yes 55906694
chr17 72391188 72391195 MEIS1 JASPAR yes 21292051
chr17 72391188 72391195 MEIS1 JASPAR yes 55906695
chr17 72391188 72391196 MEIS2 JASPAR yes 21292052
chr17 72391188 72391196 MEIS3 JASPAR yes 21292053
chr17 72391188 72391196 MEIS2 JASPAR yes 55906696
chr17 72391188 72391196 MEIS3 JASPAR yes 55906697
chr17 72391189 72391201 PKNOX1 JASPAR yes 21292054
chr17 72391189 72391201 PKNOX2 JASPAR yes 21292055
chr17 72391189 72391201 TGIF1 JASPAR yes 21292056
chr17 72391189 72391201 TGIF2 JASPAR yes 21292057
chr17 72391189 72391201 PKNOX1 JASPAR yes 55906698
chr17 72391189 72391201 PKNOX2 JASPAR yes 55906699
chr17 72391189 72391201 TGIF1 JASPAR yes 55906700
chr17 72391189 72391201 TGIF2 JASPAR yes 55906701
chr17 72391190 72391199 SNAI2 JASPAR yes 21292058
chr17 72391190 72391199 SNAI2 JASPAR yes 55906702
chr17 72391190 72391200 ID4 JASPAR yes 21292059
chr17 72391190 72391200 TCF3 JASPAR yes 21292060
chr17 72391190 72391200 TCF4 JASPAR yes 21292061
chr17 72391190 72391200 ID4 JASPAR yes 55906703
chr17 72391190 72391200 TCF3 JASPAR yes 55906704
chr17 72391190 72391200 TCF4 JASPAR yes 55906705
chr17 72391201 72391212 NRF1 JASPAR yes 21292062
chr17 72391201 72391212 NRF1 JASPAR yes 55906706
chr17 72391203 72391212 SNAI2 JASPAR yes 21292063
chr17 72391203 72391212 SNAI2 JASPAR yes 55906707
chr17 72391203 72391213 ID4 JASPAR yes 21292064
chr17 72391203 72391213 TCF3 JASPAR yes 21292065
chr17 72391203 72391213 TCF4 JASPAR yes 21292066
chr17 72391203 72391213 ID4 JASPAR yes 55906708
chr17 72391203 72391213 TCF3 JASPAR yes 55906709
chr17 72391203 72391213 TCF4 JASPAR yes 55906710
chr17 72391214 72391226 ZBTB7A JASPAR yes 21292067
chr17 72391214 72391226 ZBTB7A JASPAR yes 55906711
chr17 72391214 72391228 PLAG1 JASPAR yes 21292068
chr17 72391214 72391228 PLAG1 JASPAR yes 55906712
chr17 72391226 72391244 RARA JASPAR yes 21292069
chr17 72391226 72391244 RARA JASPAR yes 55906713
chr17 72391266 72391272 YY1 JASPAR yes 21292070
chr17 72391266 72391272 YY1 JASPAR yes 55906714
chr17 72391283 72391286 MYB TRANSFAC yes 21292071
chr17 72391283 72391286 MYB TRANSFAC yes 55906715
chr17 72391303 72391308 ETS2 TRANSFAC yes 21292072
chr17 72391303 72391308 ETS2 TRANSFAC yes 55906716
chr17 72391311 72391325 JUN JASPAR yes 21292073
chr17 72391311 72391325 JUN JASPAR yes 55906717
chr17 72391314 72391325 FOSL2 JASPAR yes 21292074
chr17 72391314 72391325 JUNB JASPAR yes 21292075
chr17 72391314 72391325 FOSL2 JASPAR yes 55906718
chr17 72391314 72391325 JUNB JASPAR yes 55906719
chr17 72391315 72391326 FOS JASPAR yes 21292076
chr17 72391315 72391326 FOSL1 JASPAR yes 21292077
chr17 72391315 72391326 JUND JASPAR yes 21292078
chr17 72391315 72391326 FOS JASPAR yes 55906720
chr17 72391315 72391326 FOSL1 JASPAR yes 55906721
chr17 72391315 72391326 JUND JASPAR yes 55906722
chr17 72391316 72391323 JUN TRANSFAC yes 21292079
chr17 72391316 72391323 JUN TRANSFAC yes 55906723
chr17 72391316 72391327 NFE2L2 JASPAR yes 21292080
chr17 72391316 72391327 NFE2L2 JASPAR yes 55906724
chr17 72391328 72391341 ELF1 JASPAR yes 21292081
chr17 72391328 72391341 ELF1 JASPAR yes 55906725
chr17 72391329 72391339 ELK1 JASPAR yes 21292082
chr17 72391329 72391339 ELK1 JASPAR yes 55906726
chr17 72391329 72391341 EHF JASPAR yes 21292083
chr17 72391329 72391341 ELF1 JASPAR yes 21292084
chr17 72391329 72391341 EHF JASPAR yes 55906727
chr17 72391329 72391341 ELF1 JASPAR yes 55906728
chr17 72391329 72391342 ELF3 JASPAR yes 21292085
chr17 72391329 72391342 ELF3 JASPAR yes 55906729
chr17 72391330 72391341 ELF5 JASPAR yes 21292086
chr17 72391330 72391341 ELF5 JASPAR yes 55906730
chr17 72391331 72391341 GABPA JASPAR yes 21292087
chr17 72391331 72391341 GABPA JASPAR yes 55906731
chr17 72391333 72391339 ETS1 JASPAR yes 21292088
chr17 72391333 72391339 SPI1 JASPAR yes 21292089
chr17 72391333 72391339 ETS1 JASPAR yes 55906732
chr17 72391333 72391339 SPI1 JASPAR yes 55906733
chr17 72391337 72391343 GATA3 JASPAR yes 21292090
chr17 72391337 72391343 GATA3 JASPAR yes 55906734
chr17 72391343 72391349 HiNF-A TRANSFAC yes 21292091
chr17 72391343 72391349 HiNF-A TRANSFAC yes 55906735
chr17 72391355 72391359 H4TF2 TRANSFAC yes 21292092
chr17 72391355 72391359 H4TF2 TRANSFAC yes 55906736
chr17 72391386 72391401 RUNX2 JASPAR yes 21292093
chr17 72391386 72391401 RUNX2 JASPAR yes 55906737
chr17 72391391 72391406 TFAP2A JASPAR yes 21292094
chr17 72391391 72391406 TFAP2A JASPAR yes 55906738
chr17 72391394 72391406 TFAP2A JASPAR yes 21292095
chr17 72391394 72391406 TFAP2B JASPAR yes 21292096
chr17 72391394 72391406 TFAP2C JASPAR yes 21292097
chr17 72391394 72391406 TFAP2A JASPAR yes 55906739
chr17 72391394 72391406 TFAP2B JASPAR yes 55906740
chr17 72391394 72391406 TFAP2C JASPAR yes 55906741
chr17 72391394 72391409 TFAP2A JASPAR yes 21292098
chr17 72391394 72391409 TFAP2A JASPAR yes 55906742
SNP sites on vista25899[chr17:72391130-72391401]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72391179 rs73348323 A G
ELF1 ELF5 ETS1
5048880
chr17 72391327 rs185857125 G A
FOXA1 GATA3 NFE2L2
5048881
chr17 72391334 rs117617492 C T
EHF ELF1 ELF3 ELF5 ELK1 ETS1 FOXA1 GABPA GATA3 SPI1
5048882
Genes possibly regulated by vista25899[chr17:72391130-72391401]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72322349 72351959 + KIF19 ENSG00000196169.10 72322349 0.95 1.0 16211 31219
chr17 72346906 72348271 - AC103809.2 ENSG00000268626.1 72348271 1.0 0.0 16212 57141
chr17 72352555 72358085 - BTBD17 ENSG00000204347.3 72358085 0.87 1.0 16213 66955
chr17 72363546 72368761 + GPR142 ENSG00000257008.2 72363546 0.94 0.0 16214 72416
chr17 72420990 72447792 + GPRC5C ENSG00000170412.12 72420990 0.88 1.0 16215 70411
chr17 72462555 72480933 + CD300A ENSG00000167851.9 72462555 0.94 1.0 16216 28846
Expression level of Genes
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miRNAs possibly regulated by vista25899[chr17:72391130-72391401]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results