EnhancerDB
  1. Home
  2. Enhancers
  3. vista25901[chr17:72453815-72453911]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25901[chr17:72453815-72453911]
Back to top
Tissue distribution of vista25901
Back to top
Transcription factor that possibly regulate vista25901[chr17:72453815-72453911]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72453607 72453839 SRF UCSC Txn Factor no Conserved 108291615
chr17 72453651 72454018 YY1 UCSC Txn Factor no Conserved 108291621
chr17 72453668 72454042 CTCF UCSC Txn Factor no Conserved 108291623
chr17 72453718 72453993 RAD21 UCSC Txn Factor no Conserved 108291634
chr17 72453737 72454007 SMC3 UCSC Txn Factor no Conserved 108291638
chr17 72453817 72453821 LFA1 TRANSFAC yes 21292124
chr17 72453817 72453821 LFA1 TRANSFAC yes 55912387
chr17 72453824 72453828 YY1 TRANSFAC yes 21292125
chr17 72453824 72453828 YY1 TRANSFAC yes 55912388
chr17 72453827 72453839 FOXI1 JASPAR yes 21292126
chr17 72453827 72453839 FOXI1 JASPAR yes 55912389
chr17 72453830 72453834 YY1 TRANSFAC yes 21292127
chr17 72453830 72453834 YY1 TRANSFAC yes 55912390
chr17 72453845 72453851 NFIC JASPAR yes 21292128
chr17 72453845 72453851 NFIC JASPAR yes 55912391
chr17 72453851 72453866 RFX5 JASPAR yes 21292129
chr17 72453851 72453866 RFX5 JASPAR yes 55912392
chr17 72453857 72453861 LFA1 TRANSFAC yes 21292130
chr17 72453857 72453861 LFA1 TRANSFAC yes 55912393
chr17 72453864 72453883 CTCF JASPAR yes 21292131
chr17 72453864 72453883 CTCF JASPAR yes 55912394
chr17 72453870 72453875 USF2 TRANSFAC yes 21292132
chr17 72453870 72453875 USF2 TRANSFAC yes 55912395
chr17 72453884 72453893 HIC2 JASPAR yes 21292133
chr17 72453884 72453893 HIC2 JASPAR yes 55912396
chr17 72453887 72453891 LFA1 TRANSFAC yes 21292134
chr17 72453887 72453891 LFA1 TRANSFAC yes 55912397
chr17 72453909 72453914 MYC TRANSFAC yes 21292135
chr17 72453909 72453914 MYC TRANSFAC yes 55912398
chr17 72453910 72453930 PPARG JASPAR yes 21292136
chr17 72453910 72453930 PPARG JASPAR yes 55912399
SNP sites on vista25901[chr17:72453815-72453911]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72453832 rs76754879 A G
CTCF FOXI1 RAD21 SMC3 SRF YY1
5049727
chr17 72453887 rs141743845 C T
CTCF HIC2 LFA1 RAD21 SMC3 YY1
5049728
chr17 72453910 rs539755539 CAGTT C
CTCF MYC PPARG RAD21 SMC3 YY1
5049729
Genes possibly regulated by vista25901[chr17:72453815-72453911]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72352555 72358085 - BTBD17 ENSG00000204347.3 72358085 0.87 1.0 16213 4270
chr17 72363546 72368761 + GPR142 ENSG00000257008.2 72363546 0.94 0.0 16214 9731
chr17 72420990 72447792 + GPRC5C ENSG00000170412.12 72420990 0.88 1.0 16215 67175
chr17 72462555 72480933 + CD300A ENSG00000167851.9 72462555 0.94 1.0 16216 91356
chr17 72517313 72527613 - CD300LB ENSG00000178789.4 72527613 0.92 1.0 16217 26298
chr17 72537247 72542282 - CD300C ENSG00000167850.3 72542282 0.92 1.0 16218 11629
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25901[chr17:72453815-72453911]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results