EnhancerDB
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  3. vista25904[chr17:72470215-72470385]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25904[chr17:72470215-72470385]
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Tissue distribution of vista25904
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Transcription factor that possibly regulate vista25904[chr17:72470215-72470385]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72470258 72470267 ZEB1 JASPAR yes 21292286
chr17 72470258 72470270 NHLH1 JASPAR yes 21292287
chr17 72470258 72470273 SCRT1 JASPAR yes 21292288
chr17 72470259 72470269 ID4 JASPAR yes 21292289
chr17 72470259 72470269 NHLH1 JASPAR yes 21292290
chr17 72470259 72470269 TCF3 JASPAR yes 21292291
chr17 72470259 72470269 TCF4 JASPAR yes 21292292
chr17 72470260 72470269 SNAI2 JASPAR yes 21292293
chr17 72470260 72470273 SCRT2 JASPAR yes 21292294
chr17 72470261 72470266 USF2 TRANSFAC yes 21292295
chr17 72470267 72470281 TLX1 JASPAR yes 21292296
chr17 72470278 72470289 ETV2 JASPAR yes 21292297
chr17 72470279 72470289 ELK1 JASPAR yes 21292298
chr17 72470279 72470289 ELK3 JASPAR yes 21292299
chr17 72470279 72470289 ERF JASPAR yes 21292300
chr17 72470279 72470289 ERG JASPAR yes 21292301
chr17 72470279 72470289 ETS1 JASPAR yes 21292302
chr17 72470279 72470289 ETV1 JASPAR yes 21292303
chr17 72470279 72470289 ETV3 JASPAR yes 21292304
chr17 72470279 72470289 ETV4 JASPAR yes 21292305
chr17 72470279 72470289 ETV5 JASPAR yes 21292306
chr17 72470279 72470289 ETV6 JASPAR yes 21292307
chr17 72470279 72470289 FEV JASPAR yes 21292308
chr17 72470279 72470289 FLI1 JASPAR yes 21292309
chr17 72470279 72470289 GABPA JASPAR yes 21292310
chr17 72470279 72470290 ELK4 JASPAR yes 21292311
chr17 72470279 72470290 FLI1 JASPAR yes 21292312
chr17 72470281 72470287 ETS1 JASPAR yes 21292313
chr17 72470281 72470287 SPI1 JASPAR yes 21292314
chr17 72470286 72470298 NHLH1 JASPAR yes 21292315
chr17 72470291 72470311 RREB1 JASPAR yes 21292316
chr17 72470293 72470313 RREB1 JASPAR yes 21292317
chr17 72470296 72470306 ZNF740 JASPAR yes 21292318
chr17 72470296 72470310 PLAG1 JASPAR yes 21292319
chr17 72470298 72470307 SP1 TRANSFAC yes 21292320
chr17 72470298 72470308 SP1 JASPAR yes 21292321
chr17 72470300 72470306 MAZ TRANSFAC yes 21292322
chr17 72470306 72470311 SP1 TRANSFAC yes 21292323
chr17 72470329 72470343 PLAG1 JASPAR yes 21292324
chr17 72470330 72470335 SP1 TRANSFAC yes 21292325
chr17 72470330 72470344 PLAG1 JASPAR yes 21292326
chr17 72470340 72470345 ETS2 TRANSFAC yes 21292327
chr17 72470349 72470353 NFE TRANSFAC yes 21292328
chr17 72470353 72470364 EBF1 JASPAR yes 21292329
chr17 72470368 72470379 USF2 JASPAR yes 21292330
chr17 72470369 72470379 TFE3 JASPAR yes 21292331
chr17 72470369 72470379 TFEB JASPAR yes 21292332
chr17 72470369 72470379 TFEC JASPAR yes 21292333
chr17 72470369 72470380 USF1 JASPAR yes 21292334
chr17 72470374 72470382 MEIS2 JASPAR yes 21292335
chr17 72470374 72470382 MEIS3 JASPAR yes 21292336
chr17 72470380 72470384 ESR1 TRANSFAC yes 21292337
SNP sites on vista25904[chr17:72470215-72470385]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72470328 rs3215317 T TG no 5050057
chr17 72470328 rs562760236 T TG no 5050058
chr17 72470353 rs2293190 T C
EBF1 NFE
5050059
chr17 72470377 rs567564889 G A
MEIS2 MEIS3 TFE3 TFEB TFEC USF1 USF2
5050060
Genes possibly regulated by vista25904[chr17:72470215-72470385]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72420990 72447792 + GPRC5C ENSG00000170412.12 72420990 0.88 1.0 16215 50775
chr17 72462555 72480933 + CD300A ENSG00000167851.9 72462555 0.94 1.0 16216 92340
chr17 72517313 72527613 - CD300LB ENSG00000178789.4 72527613 0.92 1.0 16217 42772
chr17 72537247 72542282 - CD300C ENSG00000167850.3 72542282 0.92 1.0 16218 28103
Expression level of Genes
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miRNAs possibly regulated by vista25904[chr17:72470215-72470385]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results