EnhancerDB
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  3. vista25908[chr17:72516229-72516644]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25908[chr17:72516229-72516644]
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Tissue distribution of vista25908
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Transcription factor that possibly regulate vista25908[chr17:72516229-72516644]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72516229 72516244 PRDM1 JASPAR yes 21292552
chr17 72516230 72516236 MAZ TRANSFAC yes 21292553
chr17 72516230 72516241 E2F6 JASPAR yes 21292554
chr17 72516253 72516257 LFA1 TRANSFAC yes 21292555
chr17 72516256 72516270 POU4F1 JASPAR yes 21292556
chr17 72516272 72516282 TBX21 JASPAR yes 21292557
chr17 72516272 72516283 TBX20 JASPAR yes 21292558
chr17 72516272 72516283 TBX2 JASPAR yes 21292559
chr17 72516272 72516285 EOMES JASPAR yes 21292560
chr17 72516272 72516290 NR3C1 JASPAR yes 21292561
chr17 72516273 72516283 TBR1 JASPAR yes 21292562
chr17 72516278 72516293 HSF1 JASPAR yes 21292563
chr17 72516279 72516292 HSF1 JASPAR yes 21292564
chr17 72516279 72516292 HSF2 JASPAR yes 21292565
chr17 72516279 72516292 HSF4 JASPAR yes 21292566
chr17 72516283 72516298 HSF1 JASPAR yes 21292567
chr17 72516284 72516297 HSF2 JASPAR yes 21292568
chr17 72516305 72516317 POU3F1 JASPAR yes 21292569
chr17 72516305 72516317 POU3F2 JASPAR yes 21292570
chr17 72516307 72516316 POU3F4 JASPAR yes 21292571
chr17 72516314 72516318 TEAD2 TRANSFAC yes 21292572
chr17 72516314 72516324 MNX1 JASPAR yes 21292573
chr17 72516314 72516324 POU6F1 JASPAR yes 21292574
chr17 72516315 72516323 LMX1A JASPAR yes 21292575
chr17 72516315 72516323 LMX1B JASPAR yes 21292576
chr17 72516315 72516323 NKX6-1 JASPAR yes 21292577
chr17 72516315 72516323 NKX6-2 JASPAR yes 21292578
chr17 72516315 72516323 VAX1 JASPAR yes 21292579
chr17 72516315 72516323 VAX2 JASPAR yes 21292580
chr17 72516315 72516323 VSX1 JASPAR yes 21292581
chr17 72516315 72516323 VSX2 JASPAR yes 21292582
chr17 72516316 72516326 PAX3 JASPAR yes 21292583
chr17 72516316 72516326 PAX7 JASPAR yes 21292584
chr17 72516318 72516332 JUN JASPAR yes 21292585
chr17 72516320 72516331 PROP1 JASPAR yes 21292586
chr17 72516326 72516330 YY1 TRANSFAC yes 21292587
chr17 72516335 72516343 TBX5 JASPAR yes 21292588
chr17 72516355 72516370 HNF4G JASPAR yes 21292589
chr17 72516358 72516362 LFA1 TRANSFAC yes 21292590
chr17 72516363 72516368 H4TF1 TRANSFAC yes 21292591
chr17 72516381 72516387 TCF4 TRANSFAC yes 21292592
chr17 72516381 72516396 FOXP1 JASPAR yes 21292593
chr17 72516382 72516394 FOXC2 JASPAR yes 21292594
chr17 72516384 72516395 FOXA1 JASPAR yes 21292595
chr17 72516392 72516396 YY1 TRANSFAC yes 21292596
chr17 72516398 72516409 RUNX1 JASPAR yes 21292597
chr17 72516411 72516432 ZNF263 JASPAR yes 21292598
chr17 72516412 72516426 SPI1 JASPAR yes 21292599
chr17 72516412 72516426 SPIC JASPAR yes 21292600
chr17 72516418 72516423 ETS2 TRANSFAC yes 21292601
chr17 72516427 72516432 ETS2 TRANSFAC yes 21292602
chr17 72516436 72516449 SMAD2 JASPAR yes 21292603
chr17 72516459 72516470 E2F4 JASPAR yes 21292604
chr17 72516470 72516474 NFE TRANSFAC yes 21292605
chr17 72516470 72516475 GATA1 TRANSFAC yes 21292606
chr17 72516470 72516476 GATA3 JASPAR yes 21292607
chr17 72516481 72516487 NFE2 TRANSFAC yes 21292608
chr17 72516491 72516512 REST JASPAR yes 21292609
chr17 72516510 72516520 ETV6 JASPAR yes 21292610
chr17 72516510 72516524 SPIC JASPAR yes 21292611
chr17 72516511 72516518 SPI1 JASPAR yes 21292612
chr17 72516511 72516519 EHF JASPAR yes 21292613
chr17 72516513 72516520 SPIB JASPAR yes 21292614
chr17 72516513 72516528 RUNX2 JASPAR yes 21292615
chr17 72516517 72516532 RFX5 JASPAR yes 21292616
chr17 72516525 72516538 ZBTB18 JASPAR yes 21292617
chr17 72516529 72516534 MYC TRANSFAC yes 21292618
chr17 72516552 72516562 SP1 JASPAR yes 21292619
chr17 72516554 72516559 ETS2 TRANSFAC yes 21292620
chr17 72516561 72516572 EBF1 JASPAR yes 21292621
chr17 72516567 72516572 TFAP2A TRANSFAC yes 21292622
chr17 72516567 72516573 MZF1 JASPAR yes 21292623
chr17 72516569 72516574 ETS2 TRANSFAC yes 21292624
chr17 72516572 72516577 ETS2 TRANSFAC yes 21292625
chr17 72516607 72516613 ZNF354C JASPAR yes 21292626
chr17 72516609 72516617 TBX5 JASPAR yes 21292627
chr17 72516609 72516618 ZEB1 JASPAR yes 21292628
chr17 72516610 72516620 ID4 JASPAR yes 21292629
chr17 72516610 72516620 NHLH1 JASPAR yes 21292630
chr17 72516610 72516620 TCF3 JASPAR yes 21292631
chr17 72516610 72516620 TCF4 JASPAR yes 21292632
chr17 72516611 72516620 SNAI2 JASPAR yes 21292633
chr17 72516612 72516617 USF2 TRANSFAC yes 21292634
chr17 72516621 72516642 IRF1 JASPAR yes 21292635
chr17 72516623 72516626 MYB TRANSFAC yes 21292636
chr17 72516623 72516638 PRDM1 JASPAR yes 21292637
chr17 72516623 72516638 STAT2 JASPAR yes 21292638
chr17 72516626 72516641 FOXP1 JASPAR yes 21292639
chr17 72516627 72516642 FOXP1 JASPAR yes 21292640
chr17 72516628 72516643 FOXP1 JASPAR yes 21292641
chr17 72516629 72516644 FOXP1 JASPAR yes 21292642
SNP sites on vista25908[chr17:72516229-72516644]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72516336 rs2382843 A G
TBX5
5050366
chr17 72516627 rs36055877 C CTT
FOXP1 IRF1 PRDM1 STAT2
5050367
Genes possibly regulated by vista25908[chr17:72516229-72516644]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72420990 72447792 + GPRC5C ENSG00000170412.12 72420990 0.88 1.0 16215 4761
chr17 72462555 72480933 + CD300A ENSG00000167851.9 72462555 0.94 1.0 16216 46326
chr17 72517313 72527613 - CD300LB ENSG00000178789.4 72527613 0.92 1.0 16217 89031
chr17 72537247 72542282 - CD300C ENSG00000167850.3 72542282 0.92 1.0 16218 74362
chr17 72575504 72588422 - CD300LD ENSG00000204345.1 72588422 0.95 0.88 16219 28222
chr17 72580818 72590348 + C17orf77 ENSG00000182352.4 72580818 0.97 0.97 16220 35826
Expression level of Genes
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miRNAs possibly regulated by vista25908[chr17:72516229-72516644]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results