EnhancerDB
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  3. vista25920[chr17:72596633-72597034]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25920[chr17:72596633-72597034]
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Tissue distribution of vista25920
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Transcription factor that possibly regulate vista25920[chr17:72596633-72597034]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72596645 72596659 EBF1 JASPAR yes 21293125
chr17 72596645 72596659 EBF1 JASPAR yes 55915849
chr17 72596706 72596716 SP1 JASPAR yes 21293126
chr17 72596706 72596716 SP1 JASPAR yes 55915850
chr17 72596708 72596713 SP1 TRANSFAC yes 21293127
chr17 72596708 72596713 SP1 TRANSFAC yes 55915851
chr17 72596708 72596714 SP1 TRANSFAC yes 21293128
chr17 72596708 72596714 SP1 TRANSFAC yes 55915852
chr17 72596718 72596731 ZBTB18 JASPAR yes 21293129
chr17 72596718 72596731 ZBTB18 JASPAR yes 55915853
chr17 72596719 72596729 NEUROG2 JASPAR yes 21293130
chr17 72596719 72596729 NEUROG2 JASPAR yes 55915854
chr17 72596793 72596799 PEA3 TRANSFAC yes 21293131
chr17 72596793 72596799 PEA3 TRANSFAC yes 55915855
chr17 72596793 72596814 ZNF263 JASPAR yes 21293132
chr17 72596793 72596814 ZNF263 JASPAR yes 55915856
chr17 72596830 72596842 TEAD1 JASPAR yes 21293133
chr17 72596830 72596842 TEAD1 JASPAR yes 55915857
chr17 72596832 72596842 TEAD1 JASPAR yes 21293134
chr17 72596832 72596842 TEAD4 JASPAR yes 21293135
chr17 72596832 72596842 TEAD1 JASPAR yes 55915858
chr17 72596832 72596842 TEAD4 JASPAR yes 55915859
chr17 72596833 72596841 TEAD3 JASPAR yes 21293136
chr17 72596833 72596841 TEAD3 JASPAR yes 55915860
chr17 72596834 72596848 RORA JASPAR yes 21293137
chr17 72596834 72596848 RORA JASPAR yes 55915861
chr17 72596883 72596898 HNF4G JASPAR yes 21293138
chr17 72596883 72596898 HNF4G JASPAR yes 55915862
chr17 72596884 72596899 HNF4A JASPAR yes 21293139
chr17 72596884 72596899 HNF4A JASPAR yes 55915863
chr17 72596893 72596908 SOX21 JASPAR yes 21293140
chr17 72596893 72596908 SOX21 JASPAR yes 55915864
chr17 72596899 72596915 SOX8 JASPAR yes 21293141
chr17 72596899 72596915 SOX8 JASPAR yes 55915865
chr17 72596900 72596909 SOX9 JASPAR yes 21293142
chr17 72596900 72596909 SOX9 JASPAR yes 55915866
chr17 72596916 72596923 NKX3-1 JASPAR yes 21293143
chr17 72596916 72596923 NKX3-1 JASPAR yes 55915867
chr17 72596939 72596945 SOX10 JASPAR yes 21293144
chr17 72596939 72596945 SOX10 JASPAR yes 55915868
chr17 72596960 72596966 SP1 TRANSFAC yes 21293145
chr17 72596960 72596966 SP1 TRANSFAC yes 55915869
chr17 72596961 72596966 SP1 TRANSFAC yes 21293146
chr17 72596961 72596966 SP1 TRANSFAC yes 55915870
chr17 72596962 72596967 SP1 TRANSFAC yes 21293147
chr17 72596962 72596967 SP1 TRANSFAC yes 55915871
chr17 72596962 72596968 SP1 TRANSFAC yes 21293148
chr17 72596962 72596968 SP1 TRANSFAC yes 55915872
chr17 72596985 72596991 MAZ TRANSFAC yes 21293149
chr17 72596985 72596991 MAZ TRANSFAC yes 55915873
chr17 72596997 72597011 NR2F1 JASPAR yes 21293150
chr17 72596997 72597011 NR2F1 JASPAR yes 55915874
chr17 72597003 72597014 DUX4 JASPAR yes 21293151
chr17 72597003 72597014 DUX4 JASPAR yes 55915875
chr17 72597008 72597020 PBX1 JASPAR yes 21293152
chr17 72597008 72597020 PBX1 JASPAR yes 55915876
chr17 72597013 72597026 ELF1 JASPAR yes 21293153
chr17 72597013 72597026 ELF1 JASPAR yes 55915877
chr17 72597017 72597022 ETS2 TRANSFAC yes 21293154
chr17 72597017 72597022 ETS2 TRANSFAC yes 55915878
chr17 72597027 72597038 ELK4 JASPAR yes 21293155
chr17 72597027 72597038 FLI1 JASPAR yes 21293156
chr17 72597027 72597038 ELK4 JASPAR yes 55915879
chr17 72597027 72597038 FLI1 JASPAR yes 55915880
chr17 72597028 72597038 ETV6 JASPAR yes 21293157
chr17 72597028 72597038 ETV6 JASPAR yes 55915881
chr17 72597028 72597039 ELF5 JASPAR yes 21293158
chr17 72597028 72597039 ELF5 JASPAR yes 55915882
chr17 72597028 72597040 ELF1 JASPAR yes 21293159
chr17 72597028 72597040 ELF4 JASPAR yes 21293160
chr17 72597028 72597040 ELF1 JASPAR yes 55915883
chr17 72597028 72597040 ELF4 JASPAR yes 55915884
chr17 72597028 72597041 ELF1 JASPAR yes 21293161
chr17 72597028 72597041 ELF1 JASPAR yes 55915885
chr17 72597029 72597036 SPI1 JASPAR yes 21293162
chr17 72597029 72597036 SPI1 JASPAR yes 55915886
chr17 72597029 72597037 EHF JASPAR yes 21293163
chr17 72597029 72597037 FEV JASPAR yes 21293164
chr17 72597029 72597037 EHF JASPAR yes 55915887
chr17 72597029 72597037 FEV JASPAR yes 55915888
SNP sites on vista25920[chr17:72596633-72597034]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72596655 rs141086897 G A
EBF1
5051012
chr17 72596682 rs149675579 G C no 5051013
chr17 72596700 rs183727643 C G,T no 5051014
chr17 72596707 rs59625030 G A
SP1
5051015
chr17 72596715 rs12452539 G C
SP1
5051016
chr17 72596756 rs16978135 A G no 5051017
chr17 72596795 rs72631369 G A
PEA3 ZNF263
5051018
chr17 72596802 rs140221129 A G
ZNF263
5051019
chr17 72596827 rs145352658 C T no 5051020
chr17 72596878 rs568645434 C T no 5051021
Genes possibly regulated by vista25920[chr17:72596633-72597034]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72517313 72527613 - CD300LB ENSG00000178789.4 72527613 0.92 1.0 16217 30980
chr17 72537247 72542282 - CD300C ENSG00000167850.3 72542282 0.92 1.0 16218 45649
chr17 72575504 72588422 - CD300LD ENSG00000204345.1 72588422 0.95 0.88 16219 91789
chr17 72580818 72590348 + C17orf77 ENSG00000182352.4 72580818 0.97 0.97 16220 84185
chr17 72606026 72619897 - CD300E ENSG00000186407.4 72619897 0.96 0.93 16221 77137
chr17 72666717 72743474 + RAB37 ENSG00000172794.15 72666717 0.92 1.0 16222 30317
Expression level of Genes
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miRNAs possibly regulated by vista25920[chr17:72596633-72597034]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results