EnhancerDB
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  3. vista25924[chr17:72602327-72602738]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25924[chr17:72602327-72602738]
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Tissue distribution of vista25924
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Transcription factor that possibly regulate vista25924[chr17:72602327-72602738]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72602324 72602336 YY1 JASPAR yes 21293293
chr17 72602324 72602336 YY1 JASPAR yes 55916583
chr17 72602327 72602333 YY1 JASPAR yes 21293294
chr17 72602327 72602333 YY1 JASPAR yes 55916584
chr17 72602355 72602359 LFA1 TRANSFAC yes 21293295
chr17 72602355 72602359 LFA1 TRANSFAC yes 55916585
chr17 72602360 72602381 REST JASPAR yes 21293296
chr17 72602360 72602381 REST JASPAR yes 55916586
chr17 72602367 72602378 ESRRA JASPAR yes 21293297
chr17 72602367 72602378 ESRRA JASPAR yes 55916587
chr17 72602371 72602375 LFA1 TRANSFAC yes 21293298
chr17 72602371 72602375 LFA1 TRANSFAC yes 55916588
chr17 72602381 72602386 SP1 TRANSFAC yes 21293299
chr17 72602381 72602386 SP1 TRANSFAC yes 55916589
chr17 72602381 72602388 SP1 TRANSFAC yes 21293300
chr17 72602381 72602388 SP1 TRANSFAC yes 55916590
chr17 72602381 72602390 SP1 TRANSFAC yes 21293301
chr17 72602381 72602390 SP1 TRANSFAC yes 55916591
chr17 72602406 72602417 NFKB1 JASPAR yes 21293302
chr17 72602406 72602417 NFKB1 JASPAR yes 55916592
chr17 72602407 72602412 ETS2 TRANSFAC yes 21293303
chr17 72602407 72602412 ETS2 TRANSFAC yes 55916593
chr17 72602411 72602428 RARA JASPAR yes 21293304
chr17 72602411 72602428 RARA JASPAR yes 55916594
chr17 72602426 72602445 CTCF JASPAR yes 21293305
chr17 72602426 72602445 CTCF JASPAR yes 55916595
chr17 72602427 72602438 TFAP2B JASPAR yes 21293306
chr17 72602427 72602438 TFAP2B JASPAR yes 55916596
chr17 72602441 72602452 NFE2L2 JASPAR yes 21293307
chr17 72602441 72602452 NFE2L2 JASPAR yes 55916597
chr17 72602441 72602456 HNF4G JASPAR yes 21293308
chr17 72602441 72602456 HNF4G JASPAR yes 55916598
chr17 72602447 72602459 INSM1 JASPAR yes 21293309
chr17 72602447 72602459 INSM1 JASPAR yes 55916599
chr17 72602459 72602470 NFKB1 JASPAR yes 21293310
chr17 72602459 72602470 NFKB1 JASPAR yes 55916600
chr17 72602460 72602470 NFKB1 JASPAR yes 21293311
chr17 72602460 72602470 RELA JASPAR yes 21293312
chr17 72602460 72602470 NFKB1 JASPAR yes 55916601
chr17 72602460 72602470 RELA JASPAR yes 55916602
chr17 72602460 72602471 NFKB1 JASPAR yes 21293313
chr17 72602460 72602471 NFKB1 JASPAR yes 55916603
chr17 72602474 72602479 TFAP2A TRANSFAC yes 21293314
chr17 72602474 72602479 TFAP2A TRANSFAC yes 55916604
chr17 72602474 72602480 MZF1 JASPAR yes 21293315
chr17 72602474 72602480 MZF1 JASPAR yes 55916605
chr17 72602484 72602505 REST JASPAR yes 21293316
chr17 72602484 72602505 REST JASPAR yes 55916606
chr17 72602498 72602510 PKNOX2 JASPAR yes 21293317
chr17 72602498 72602510 PKNOX2 JASPAR yes 55916607
chr17 72602499 72602508 SNAI2 JASPAR yes 21293318
chr17 72602499 72602508 SNAI2 JASPAR yes 55916608
chr17 72602499 72602509 FIGLA JASPAR yes 21293319
chr17 72602499 72602509 ID4 JASPAR yes 21293320
chr17 72602499 72602509 MSC JASPAR yes 21293321
chr17 72602499 72602509 TCF3 JASPAR yes 21293322
chr17 72602499 72602509 TCF4 JASPAR yes 21293323
chr17 72602499 72602509 FIGLA JASPAR yes 55916609
chr17 72602499 72602509 ID4 JASPAR yes 55916610
chr17 72602499 72602509 MSC JASPAR yes 55916611
chr17 72602499 72602509 TCF3 JASPAR yes 55916612
chr17 72602499 72602509 TCF4 JASPAR yes 55916613
chr17 72602505 72602516 FOXA1 JASPAR yes 21293324
chr17 72602505 72602516 FOXA1 JASPAR yes 55916614
chr17 72602515 72602520 ETS2 TRANSFAC yes 21293325
chr17 72602515 72602520 ETS2 TRANSFAC yes 55916615
chr17 72602529 72602549 ESR1 JASPAR yes 21293326
chr17 72602529 72602549 ESR1 JASPAR yes 55916616
chr17 72602532 72602542 NFIA JASPAR yes 21293327
chr17 72602532 72602542 NFIA JASPAR yes 55916617
chr17 72602533 72602542 NFIX JASPAR yes 21293328
chr17 72602533 72602542 NFIX JASPAR yes 55916618
chr17 72602533 72602551 ESR2 JASPAR yes 21293329
chr17 72602533 72602551 ESR2 JASPAR yes 55916619
chr17 72602534 72602540 NFIC JASPAR yes 21293330
chr17 72602534 72602540 NFIC JASPAR yes 55916620
chr17 72602539 72602552 NR2F1 JASPAR yes 21293331
chr17 72602539 72602552 NR2F1 JASPAR yes 55916621
chr17 72602549 72602555 SOX10 JASPAR yes 21293332
chr17 72602549 72602555 SOX10 JASPAR yes 55916622
chr17 72602570 72602591 ZNF263 JASPAR yes 21293333
chr17 72602570 72602591 ZNF263 JASPAR yes 55916623
chr17 72602575 72602581 ZNF354C JASPAR yes 21293334
chr17 72602575 72602581 ZNF354C JASPAR yes 55916624
chr17 72602577 72602588 ELK4 JASPAR yes 21293335
chr17 72602577 72602588 FLI1 JASPAR yes 21293336
chr17 72602577 72602588 ELK4 JASPAR yes 55916625
chr17 72602577 72602588 FLI1 JASPAR yes 55916626
chr17 72602577 72602590 ELF3 JASPAR yes 21293337
chr17 72602577 72602590 ELF3 JASPAR yes 55916627
chr17 72602578 72602588 ERF JASPAR yes 21293338
chr17 72602578 72602588 ETS1 JASPAR yes 21293339
chr17 72602578 72602588 ETV6 JASPAR yes 21293340
chr17 72602578 72602588 GABPA JASPAR yes 21293341
chr17 72602578 72602588 ERF JASPAR yes 55916628
chr17 72602578 72602588 ETS1 JASPAR yes 55916629
chr17 72602578 72602588 ETV6 JASPAR yes 55916630
chr17 72602578 72602588 GABPA JASPAR yes 55916631
chr17 72602578 72602589 ELF5 JASPAR yes 21293342
chr17 72602578 72602589 ELF5 JASPAR yes 55916632
chr17 72602578 72602590 EHF JASPAR yes 21293343
chr17 72602578 72602590 ELF1 JASPAR yes 21293344
chr17 72602578 72602590 ELF4 JASPAR yes 21293345
chr17 72602578 72602590 EHF JASPAR yes 55916633
chr17 72602578 72602590 ELF1 JASPAR yes 55916634
chr17 72602578 72602590 ELF4 JASPAR yes 55916635
chr17 72602578 72602591 ELF1 JASPAR yes 21293346
chr17 72602578 72602591 ELF1 JASPAR yes 55916636
chr17 72602579 72602586 SPI1 JASPAR yes 21293347
chr17 72602579 72602586 SPI1 JASPAR yes 55916637
chr17 72602579 72602587 EHF JASPAR yes 21293348
chr17 72602579 72602587 FEV JASPAR yes 21293349
chr17 72602579 72602587 EHF JASPAR yes 55916638
chr17 72602579 72602587 FEV JASPAR yes 55916639
chr17 72602622 72602643 REST JASPAR yes 21293350
chr17 72602622 72602643 REST JASPAR yes 55916640
chr17 72602659 72602664 SP1 TRANSFAC yes 21293351
chr17 72602659 72602664 SP1 TRANSFAC yes 55916641
chr17 72602659 72602673 PLAG1 JASPAR yes 21293352
chr17 72602659 72602673 PLAG1 JASPAR yes 55916642
chr17 72602660 72602679 CTCF JASPAR yes 21293353
chr17 72602660 72602679 CTCF JASPAR yes 55916643
chr17 72602661 72602674 TFAP2B JASPAR yes 21293354
chr17 72602661 72602674 TFAP2B JASPAR yes 55916644
chr17 72602662 72602673 EBF1 JASPAR yes 21293355
chr17 72602662 72602673 EBF1 JASPAR yes 55916645
chr17 72602709 72602729 RREB1 JASPAR yes 21293356
chr17 72602709 72602729 RREB1 JASPAR yes 55916646
chr17 72602712 72602732 RREB1 JASPAR yes 21293357
chr17 72602712 72602732 RREB1 JASPAR yes 55916647
chr17 72602735 72602739 LFA1 TRANSFAC yes 21293358
chr17 72602735 72602739 LFA1 TRANSFAC yes 55916648
SNP sites on vista25924[chr17:72602327-72602738]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72602593 rs116557317 G A no 5051109
chr17 72602617 rs514602 C T no 5051110
chr17 72602634 rs201171423 CTGT C
REST
5051111
chr17 72602638 rs538714537 G A
REST
5051112
chr17 72602699 rs115596783 G A no 5051113
Genes possibly regulated by vista25924[chr17:72602327-72602738]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72517313 72527613 - CD300LB ENSG00000178789.4 72527613 0.92 1.0 16217 25286
chr17 72537247 72542282 - CD300C ENSG00000167850.3 72542282 0.92 1.0 16218 39955
chr17 72575504 72588422 - CD300LD ENSG00000204345.1 72588422 0.95 0.88 16219 86095
chr17 72580818 72590348 + C17orf77 ENSG00000182352.4 72580818 0.97 0.97 16220 78491
chr17 72606026 72619897 - CD300E ENSG00000186407.4 72619897 0.96 0.93 16221 82841
chr17 72666717 72743474 + RAB37 ENSG00000172794.15 72666717 0.92 1.0 16222 36021
Expression level of Genes
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miRNAs possibly regulated by vista25924[chr17:72602327-72602738]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results