EnhancerDB
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  3. vista25927[chr17:72627955-72628575]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25927[chr17:72627955-72628575]
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Tissue distribution of vista25927
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Transcription factor that possibly regulate vista25927[chr17:72627955-72628575]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72628006 72628010 H4TF2 TRANSFAC yes 21293464
chr17 72628006 72628010 H4TF2 TRANSFAC yes 55917102
chr17 72628020 72628035 FOXP1 JASPAR yes 21293465
chr17 72628020 72628035 FOXP1 JASPAR yes 55917103
chr17 72628027 72628033 HiNF-A TRANSFAC yes 21293466
chr17 72628027 72628033 HiNF-A TRANSFAC yes 55917104
chr17 72628048 72628063 HSF1 JASPAR yes 21293467
chr17 72628048 72628063 HSF1 JASPAR yes 55917105
chr17 72628055 72628070 FOXP1 JASPAR yes 21293468
chr17 72628055 72628070 FOXP1 JASPAR yes 55917106
chr17 72628056 72628077 IRF1 JASPAR yes 21293469
chr17 72628056 72628077 IRF1 JASPAR yes 55917107
chr17 72628058 72628073 IRF9 JASPAR yes 21293470
chr17 72628058 72628073 IRF9 JASPAR yes 55917108
chr17 72628059 72628073 IRF8 JASPAR yes 21293471
chr17 72628059 72628073 IRF8 JASPAR yes 55917109
chr17 72628060 72628074 STAT1 JASPAR yes 21293472
chr17 72628060 72628074 STAT1 JASPAR yes 55917110
chr17 72628060 72628075 STAT2 JASPAR yes 21293473
chr17 72628060 72628075 STAT2 JASPAR yes 55917111
chr17 72628062 72628083 IRF1 JASPAR yes 21293474
chr17 72628062 72628083 IRF1 JASPAR yes 55917112
chr17 72628065 72628079 IRF8 JASPAR yes 21293475
chr17 72628065 72628079 IRF8 JASPAR yes 55917113
chr17 72628103 72628108 TFAP2A TRANSFAC yes 21293476
chr17 72628103 72628108 TFAP2A TRANSFAC yes 55917114
chr17 72628103 72628109 MZF1 JASPAR yes 21293477
chr17 72628103 72628109 MZF1 JASPAR yes 55917115
chr17 72628108 72628122 SPI1 JASPAR yes 21293478
chr17 72628108 72628122 SPI1 JASPAR yes 55917116
chr17 72628139 72628153 SPI1 JASPAR yes 21293479
chr17 72628139 72628153 SPIC JASPAR yes 21293480
chr17 72628139 72628153 SPI1 JASPAR yes 55917117
chr17 72628139 72628153 SPIC JASPAR yes 55917118
chr17 72628155 72628169 JUN JASPAR yes 21293481
chr17 72628155 72628169 JUN JASPAR yes 55917119
chr17 72628169 72628180 FLI1 JASPAR yes 21293482
chr17 72628169 72628180 FLI1 JASPAR yes 55917120
chr17 72628170 72628183 ELF1 JASPAR yes 21293483
chr17 72628170 72628183 ELF1 JASPAR yes 55917121
chr17 72628182 72628198 SOX8 JASPAR yes 21293484
chr17 72628182 72628198 SOX8 JASPAR yes 55917122
chr17 72628193 72628197 NFE TRANSFAC yes 21293485
chr17 72628193 72628197 NFE TRANSFAC yes 55917123
chr17 72628229 72628240 FOSL2 JASPAR yes 21293486
chr17 72628229 72628240 FOSL2 JASPAR yes 55917124
chr17 72628230 72628241 FOS JASPAR yes 21293487
chr17 72628230 72628241 FOSL1 JASPAR yes 21293488
chr17 72628230 72628241 FOS JASPAR yes 55917125
chr17 72628230 72628241 FOSL1 JASPAR yes 55917126
chr17 72628253 72628263 SP1 JASPAR yes 21293489
chr17 72628253 72628263 SP1 JASPAR yes 55917127
chr17 72628254 72628264 SP1 JASPAR yes 21293490
chr17 72628254 72628264 SP1 JASPAR yes 55917128
chr17 72628274 72628287 SMAD2 JASPAR yes 21293491
chr17 72628274 72628287 SMAD2 JASPAR yes 55917129
chr17 72628278 72628288 TBX21 JASPAR yes 21293492
chr17 72628278 72628288 TBX21 JASPAR yes 55917130
chr17 72628279 72628287 MGA JASPAR yes 21293493
chr17 72628279 72628287 TBX15 JASPAR yes 21293494
chr17 72628279 72628287 TBX1 JASPAR yes 21293495
chr17 72628279 72628287 TBX4 JASPAR yes 21293496
chr17 72628279 72628287 TBX5 JASPAR yes 21293497
chr17 72628279 72628287 MGA JASPAR yes 55917131
chr17 72628279 72628287 TBX15 JASPAR yes 55917132
chr17 72628279 72628287 TBX1 JASPAR yes 55917133
chr17 72628279 72628287 TBX4 JASPAR yes 55917134
chr17 72628279 72628287 TBX5 JASPAR yes 55917135
chr17 72628312 72628316 YY1 TRANSFAC yes 21293498
chr17 72628312 72628316 YY1 TRANSFAC yes 55917136
chr17 72628330 72628342 NHLH1 JASPAR yes 21293499
chr17 72628330 72628342 NHLH1 JASPAR yes 55917137
chr17 72628331 72628341 MSC JASPAR yes 21293500
chr17 72628331 72628341 NHLH1 JASPAR yes 21293501
chr17 72628331 72628341 MSC JASPAR yes 55917138
chr17 72628331 72628341 NHLH1 JASPAR yes 55917139
chr17 72628357 72628373 SRF JASPAR yes 21293502
chr17 72628357 72628373 SRF JASPAR yes 55917140
chr17 72628358 72628370 SRF JASPAR yes 21293503
chr17 72628358 72628370 SRF JASPAR yes 55917141
chr17 72628360 72628372 SRF JASPAR yes 21293504
chr17 72628360 72628372 SRF JASPAR yes 55917142
chr17 72628388 72628401 SMAD2 JASPAR yes 21293505
chr17 72628388 72628401 SMAD2 JASPAR yes 55917143
chr17 72628393 72628401 TBX15 JASPAR yes 21293506
chr17 72628393 72628401 TBX15 JASPAR yes 55917144
chr17 72628393 72628402 ZEB1 JASPAR yes 21293507
chr17 72628393 72628402 ZEB1 JASPAR yes 55917145
chr17 72628394 72628404 TCF4 JASPAR yes 21293508
chr17 72628394 72628404 TCF4 JASPAR yes 55917146
chr17 72628395 72628404 SNAI2 JASPAR yes 21293509
chr17 72628395 72628404 SNAI2 JASPAR yes 55917147
chr17 72628396 72628401 USF2 TRANSFAC yes 21293510
chr17 72628396 72628401 USF2 TRANSFAC yes 55917148
chr17 72628402 72628410 EHF JASPAR yes 21293511
chr17 72628402 72628410 EHF JASPAR yes 55917149
chr17 72628404 72628409 ETS2 TRANSFAC yes 21293512
chr17 72628404 72628409 ETS2 TRANSFAC yes 55917150
chr17 72628428 72628440 PBX1 JASPAR yes 21293513
chr17 72628428 72628440 PBX1 JASPAR yes 55917151
chr17 72628452 72628463 STAT3 JASPAR yes 21293514
chr17 72628452 72628463 STAT3 JASPAR yes 55917152
chr17 72628458 72628464 TCF4 TRANSFAC yes 21293515
chr17 72628458 72628464 TCF4 TRANSFAC yes 55917153
chr17 72628513 72628524 CEBPB JASPAR yes 21293516
chr17 72628513 72628524 CEBPB JASPAR yes 55917154
chr17 72628513 72628525 HLF JASPAR yes 21293517
chr17 72628513 72628525 HLF JASPAR yes 55917155
chr17 72628513 72628526 ATF4 JASPAR yes 21293518
chr17 72628513 72628526 ATF4 JASPAR yes 55917156
chr17 72628513 72628528 JUND JASPAR yes 21293519
chr17 72628513 72628528 JUND JASPAR yes 55917157
chr17 72628514 72628525 CEBPA JASPAR yes 21293520
chr17 72628514 72628525 CEBPA JASPAR yes 55917158
chr17 72628514 72628527 JUN JASPAR yes 21293521
chr17 72628514 72628527 JUN JASPAR yes 55917159
chr17 72628525 72628529 NFE TRANSFAC yes 21293522
chr17 72628525 72628529 NFE TRANSFAC yes 55917160
chr17 72628532 72628537 SP1 TRANSFAC yes 21293523
chr17 72628532 72628537 SP1 TRANSFAC yes 55917161
chr17 72628535 72628545 SP1 JASPAR yes 21293524
chr17 72628535 72628545 SP1 JASPAR yes 55917162
chr17 72628540 72628556 ZNF143 JASPAR yes 21293525
chr17 72628540 72628556 ZNF143 JASPAR yes 55917163
chr17 72628550 72628563 ELF3 JASPAR yes 21293526
chr17 72628550 72628563 ELF3 JASPAR yes 55917164
chr17 72628551 72628562 ELF5 JASPAR yes 21293527
chr17 72628551 72628562 ELF5 JASPAR yes 55917165
chr17 72628551 72628563 EHF JASPAR yes 21293528
chr17 72628551 72628563 ELF1 JASPAR yes 21293529
chr17 72628551 72628563 EHF JASPAR yes 55917166
chr17 72628551 72628563 ELF1 JASPAR yes 55917167
chr17 72628553 72628559 ETS1 JASPAR yes 21293530
chr17 72628553 72628559 ETS1 JASPAR yes 55917168
chr17 72628553 72628563 ELK1 JASPAR yes 21293531
chr17 72628553 72628563 ELK1 JASPAR yes 55917169
chr17 72628553 72628573 ESR1 JASPAR yes 21293532
chr17 72628553 72628573 ESR1 JASPAR yes 55917170
SNP sites on vista25927[chr17:72627955-72628575]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72628020 rs532348614 G A
FOXP1
5051303
chr17 72628062 rs555235278 A C
FOXP1 HSF1 IRF1 IRF8 IRF9 STAT1 STAT2
5051304
chr17 72628073 rs150980203 TGAGA T
IRF1 IRF8 IRF9 STAT1 STAT2
5051305
chr17 72628129 rs147505916 A G no 5051306
chr17 72628377 rs148550845 T C no 5051307
chr17 72628423 rs561860 C T no 5051308
chr17 72628446 rs188595067 G A no 5051309
Genes possibly regulated by vista25927[chr17:72627955-72628575]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72537247 72542282 - CD300C ENSG00000167850.3 72542282 0.92 1.0 16218 14327
chr17 72575504 72588422 - CD300LD ENSG00000204345.1 72588422 0.95 0.88 16219 60467
chr17 72580818 72590348 + C17orf77 ENSG00000182352.4 72580818 0.97 0.97 16220 52863
chr17 72606026 72619897 - CD300E ENSG00000186407.4 72619897 0.96 0.93 16221 91942
chr17 72666717 72743474 + RAB37 ENSG00000172794.15 72666717 0.92 1.0 16222 61858
chr17 72690452 72709117 - CD300LF ENSG00000186074.14 72709117 0.97 0.0 16223 19458
Expression level of Genes
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miRNAs possibly regulated by vista25927[chr17:72627955-72628575]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results