EnhancerDB
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  3. vista25947[chr17:72809186-72809552]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25947[chr17:72809186-72809552]
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Tissue distribution of vista25947
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Transcription factor that possibly regulate vista25947[chr17:72809186-72809552]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72809183 72809186 MYB TRANSFAC yes 21294761
chr17 72809183 72809186 MYB TRANSFAC yes 55923863
chr17 72809225 72809243 ESR2 JASPAR yes 21294762
chr17 72809225 72809243 ESR2 JASPAR yes 55923864
chr17 72809226 72809243 ESR1 JASPAR yes 21294763
chr17 72809226 72809243 ESR1 JASPAR yes 55923865
chr17 72809226 72809244 ESR2 JASPAR yes 21294764
chr17 72809226 72809244 ESR2 JASPAR yes 55923866
chr17 72809227 72809242 ESR2 JASPAR yes 21294765
chr17 72809227 72809242 ESR2 JASPAR yes 55923867
chr17 72809227 72809247 ESR1 JASPAR yes 21294766
chr17 72809227 72809247 ESR1 JASPAR yes 55923868
chr17 72809228 72809232 ESR1 TRANSFAC yes 21294767
chr17 72809228 72809232 ESR1 TRANSFAC yes 55923869
chr17 72809243 72809253 SP1 JASPAR yes 21294768
chr17 72809243 72809253 SP1 JASPAR yes 55923870
chr17 72809246 72809252 NFE2 TRANSFAC yes 21294769
chr17 72809246 72809252 NFE2 TRANSFAC yes 55923871
chr17 72809248 72809257 SP1 TRANSFAC yes 21294770
chr17 72809248 72809257 SP1 TRANSFAC yes 55923872
chr17 72809249 72809255 SP1 TRANSFAC yes 21294771
chr17 72809249 72809255 SP1 TRANSFAC yes 55923873
chr17 72809249 72809259 SP1 JASPAR yes 21294772
chr17 72809249 72809259 SP1 JASPAR yes 55923874
chr17 72809250 72809257 SP1 TRANSFAC yes 21294773
chr17 72809250 72809257 SP1 TRANSFAC yes 55923875
chr17 72809251 72809256 SP1 TRANSFAC yes 21294774
chr17 72809251 72809256 SP1 TRANSFAC yes 55923876
chr17 72809251 72809257 SP1 TRANSFAC yes 21294775
chr17 72809251 72809257 SP1 TRANSFAC yes 55923877
chr17 72809255 72809265 NKX2-3 JASPAR yes 21294776
chr17 72809255 72809265 NKX2-3 JASPAR yes 55923878
chr17 72809256 72809265 NKX2-8 JASPAR yes 21294777
chr17 72809256 72809265 NKX2-8 JASPAR yes 55923879
chr17 72809268 72809280 PROX1 JASPAR yes 21294778
chr17 72809268 72809280 PROX1 JASPAR yes 55923880
chr17 72809317 72809332 RFX5 JASPAR yes 21294779
chr17 72809317 72809332 RFX5 JASPAR yes 55923881
chr17 72809323 72809327 ESR1 TRANSFAC yes 21294780
chr17 72809323 72809327 ESR1 TRANSFAC yes 55923882
chr17 72809351 72809355 YY1 TRANSFAC yes 21294781
chr17 72809351 72809355 YY1 TRANSFAC yes 55923883
chr17 72809395 72809405 SP1 JASPAR yes 21294782
chr17 72809395 72809405 SP1 JASPAR yes 55923884
chr17 72809407 72809413 MAZ TRANSFAC yes 21294783
chr17 72809407 72809413 MAZ TRANSFAC yes 55923885
chr17 72809411 72809422 NFKB1 JASPAR yes 21294784
chr17 72809411 72809422 NFKB1 JASPAR yes 55923886
chr17 72809416 72809430 EBF1 JASPAR yes 21294785
chr17 72809416 72809430 EBF1 JASPAR yes 55923887
chr17 72809417 72809428 EBF1 JASPAR yes 21294786
chr17 72809417 72809428 EBF1 JASPAR yes 55923888
chr17 72809421 72809430 HIC2 JASPAR yes 21294787
chr17 72809421 72809430 HIC2 JASPAR yes 55923889
chr17 72809424 72809428 LFA1 TRANSFAC yes 21294788
chr17 72809424 72809428 LFA1 TRANSFAC yes 55923890
chr17 72809434 72809446 PKNOX2 JASPAR yes 21294789
chr17 72809434 72809446 PKNOX2 JASPAR yes 55923891
chr17 72809435 72809445 TFAP4 JASPAR yes 21294790
chr17 72809435 72809445 TFAP4 JASPAR yes 55923892
chr17 72809441 72809453 PKNOX1 JASPAR yes 21294791
chr17 72809441 72809453 PKNOX2 JASPAR yes 21294792
chr17 72809441 72809453 TGIF1 JASPAR yes 21294793
chr17 72809441 72809453 TGIF2 JASPAR yes 21294794
chr17 72809441 72809453 PKNOX1 JASPAR yes 55923893
chr17 72809441 72809453 PKNOX2 JASPAR yes 55923894
chr17 72809441 72809453 TGIF1 JASPAR yes 55923895
chr17 72809441 72809453 TGIF2 JASPAR yes 55923896
chr17 72809442 72809452 MSC JASPAR yes 21294795
chr17 72809442 72809452 MYF6 JASPAR yes 21294796
chr17 72809442 72809452 MSC JASPAR yes 55923897
chr17 72809442 72809452 MYF6 JASPAR yes 55923898
chr17 72809460 72809471 FOXA1 JASPAR yes 21294797
chr17 72809460 72809471 FOXA1 JASPAR yes 55923899
chr17 72809468 72809472 NFE TRANSFAC yes 21294798
chr17 72809468 72809472 NFE TRANSFAC yes 55923900
chr17 72809475 72809490 HNF4G JASPAR yes 21294799
chr17 72809475 72809490 HNF4G JASPAR yes 55923901
chr17 72809479 72809485 TCF4 TRANSFAC yes 21294800
chr17 72809479 72809485 TCF4 TRANSFAC yes 55923902
chr17 72809486 72809496 EN2 JASPAR yes 21294801
chr17 72809486 72809496 EN2 JASPAR yes 55923903
chr17 72809493 72809507 JUN JASPAR yes 21294802
chr17 72809493 72809507 JUN JASPAR yes 55923904
chr17 72809503 72809509 SOX10 JASPAR yes 21294803
chr17 72809503 72809509 SOX10 JASPAR yes 55923905
chr17 72809506 72809520 EBF1 JASPAR yes 21294804
chr17 72809506 72809520 EBF1 JASPAR yes 55923906
chr17 72809507 72809518 EBF1 JASPAR yes 21294805
chr17 72809507 72809518 EBF1 JASPAR yes 55923907
chr17 72809536 72809551 AR JASPAR yes 21294806
chr17 72809536 72809551 AR JASPAR yes 55923908
chr17 72809544 72809564 TP53 JASPAR yes 21294807
chr17 72809544 72809564 TP53 JASPAR yes 55923909
SNP sites on vista25947[chr17:72809186-72809552]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72809227 rs567004027 C T
ESR1 ESR2
5052292
chr17 72809254 rs116380170 G A
SP1
5052293
chr17 72809289 rs149153110 G A no 5052294
chr17 72809305 rs372220637 G A no 5052295
chr17 72809306 rs551454466 T TCGCCTG no 5052296
chr17 72809314 rs572299193 G A,C no 5052297
chr17 72809423 rs543689648 C T
EBF1 HIC2
5052298
chr17 72809479 rs56092177 G T
HNF4G TCF4
5052299
chr17 72809504 rs563073488 CTT C
JUN SOX10
5052300
Genes possibly regulated by vista25947[chr17:72809186-72809552]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72744791 72765492 + SLC9A3R1 ENSG00000109062.5 72744791 0.79 0.99 16224 35605
chr17 72766686 72772506 - NAT9 ENSG00000109065.7 72772506 0.6 1.0 16225 63320
chr17 72772622 72835918 + TMEM104 ENSG00000109066.9 72772622 0.6 0.99 16226 63436
chr17 72838162 72857627 - GRIN2C ENSG00000161509.9 72857627 0.98 1.0 16227 51925
chr17 72858619 72869156 - FDXR ENSG00000161513.7 72869156 0.94 1.0 16228 40396
chr17 72873428 72889708 - FADS6 ENSG00000172782.7 72889708 0.92 0.83 16229 19844
Expression level of Genes
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miRNAs possibly regulated by vista25947[chr17:72809186-72809552]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results