EnhancerDB
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  3. vista25949[chr17:72837172-72837380]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25949[chr17:72837172-72837380]
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Tissue distribution of vista25949
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Transcription factor that possibly regulate vista25949[chr17:72837172-72837380]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 72837183 72837199 ZNF143 JASPAR yes 21294829
chr17 72837185 72837202 BCL6B JASPAR yes 21294830
chr17 72837188 72837203 RFX5 JASPAR yes 21294831
chr17 72837214 72837224 SP1 JASPAR yes 21294832
chr17 72837216 72837222 MAZ TRANSFAC yes 21294833
chr17 72837220 72837224 LFA1 TRANSFAC yes 21294834
chr17 72837244 72837249 SP1 TRANSFAC yes 21294835
chr17 72837244 72837250 SP1 TRANSFAC yes 21294836
chr17 72837254 72837265 FLI1 JASPAR yes 21294837
chr17 72837258 72837265 SPIB JASPAR yes 21294838
chr17 72837265 72837269 NFE TRANSFAC yes 21294839
chr17 72837265 72837279 CREB3 JASPAR yes 21294840
chr17 72837265 72837279 CREB3L1 JASPAR yes 21294841
chr17 72837266 72837276 MAX JASPAR yes 21294842
chr17 72837266 72837277 USF1 JASPAR yes 21294843
chr17 72837266 72837277 USF2 JASPAR yes 21294844
chr17 72837267 72837277 MLXIPL JASPAR yes 21294845
chr17 72837267 72837277 MLX JASPAR yes 21294846
chr17 72837267 72837277 MNT JASPAR yes 21294847
chr17 72837267 72837277 TFE3 JASPAR yes 21294848
chr17 72837267 72837277 TFEB JASPAR yes 21294849
chr17 72837269 72837274 MYC TRANSFAC yes 21294850
chr17 72837269 72837274 USF1 TRANSFAC yes 21294851
chr17 72837269 72837274 USF2 TRANSFAC yes 21294852
chr17 72837269 72837276 USF1 JASPAR yes 21294853
chr17 72837277 72837292 TFAP2A JASPAR yes 21294854
chr17 72837277 72837292 TFAP2C JASPAR yes 21294855
chr17 72837278 72837293 HNF4A JASPAR yes 21294856
chr17 72837279 72837294 HNF4G JASPAR yes 21294857
chr17 72837323 72837330 E2F1 TRANSFAC yes 21294858
chr17 72837325 72837339 NR2F1 JASPAR yes 21294859
chr17 72837325 72837340 HNF4G JASPAR yes 21294860
chr17 72837361 72837375 ONECUT1 JASPAR yes 21294861
chr17 72837361 72837375 ONECUT2 JASPAR yes 21294862
chr17 72837361 72837375 ONECUT3 JASPAR yes 21294863
chr17 72837365 72837374 SOX9 JASPAR yes 21294864
SNP sites on vista25949[chr17:72837172-72837380]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 72837202 rs149385215 A C
BCL6B RFX5
5052522
chr17 72837289 rs143709161 G A
HNF4A HNF4G TFAP2A TFAP2C
5052523
Genes possibly regulated by vista25949[chr17:72837172-72837380]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72744791 72765492 + SLC9A3R1 ENSG00000109062.5 72744791 0.79 0.99 16224 7619
chr17 72766686 72772506 - NAT9 ENSG00000109065.7 72772506 0.6 1.0 16225 35334
chr17 72772622 72835918 + TMEM104 ENSG00000109066.9 72772622 0.6 0.99 16226 35450
chr17 72838162 72857627 - GRIN2C ENSG00000161509.9 72857627 0.98 1.0 16227 79753
chr17 72858619 72869156 - FDXR ENSG00000161513.7 72869156 0.94 1.0 16228 68224
chr17 72873428 72889708 - FADS6 ENSG00000172782.7 72889708 0.92 0.83 16229 47672
chr17 72912176 72919351 - USH1G ENSG00000182040.4 72919351 0.95 1.0 16230 18029
chr17 72920370 72930007 + OTOP2 ENSG00000183034.8 72920370 0.99 0.93 16231 17010
chr17 72931814 72946087 + OTOP3 ENSG00000182938.4 72931814 1.0 1.0 16232 5566
Expression level of Genes
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miRNAs possibly regulated by vista25949[chr17:72837172-72837380]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results