EnhancerDB
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  3. vista25958[chr17:73073656-73074040]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25958[chr17:73073656-73074040]
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Tissue distribution of vista25958
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Transcription factor that possibly regulate vista25958[chr17:73073656-73074040]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 73073285 73074210 POLR2A UCSC Txn Factor no Conserved 108292862
chr17 73073318 73074160 CTCF UCSC Txn Factor no Conserved 108292864
chr17 73073797 73074217 RELA UCSC Txn Factor no Conserved 108292877
chr17 73073862 73074174 RUNX3 UCSC Txn Factor no Conserved 108292884
chr17 73073678 73073689 TFAP2A JASPAR yes 21295182
chr17 73073678 73073689 TFAP2B JASPAR yes 21295183
chr17 73073678 73073689 TFAP2A JASPAR yes 55931210
chr17 73073678 73073689 TFAP2B JASPAR yes 55931211
chr17 73073689 73073705 SRF JASPAR yes 21295184
chr17 73073689 73073705 SRF JASPAR yes 55931212
chr17 73073705 73073710 SP1 TRANSFAC yes 21295185
chr17 73073705 73073710 SP1 TRANSFAC yes 55931213
chr17 73073706 73073724 ESR1 JASPAR yes 21295186
chr17 73073706 73073724 ESR1 JASPAR yes 55931214
chr17 73073729 73073740 ELK4 JASPAR yes 21295187
chr17 73073729 73073740 FLI1 JASPAR yes 21295188
chr17 73073729 73073740 ELK4 JASPAR yes 55931215
chr17 73073729 73073740 FLI1 JASPAR yes 55931216
chr17 73073730 73073743 ELF1 JASPAR yes 21295189
chr17 73073730 73073743 ELF1 JASPAR yes 55931217
chr17 73073730 73073745 STAT1 JASPAR yes 21295190
chr17 73073730 73073745 STAT1 JASPAR yes 55931218
chr17 73073732 73073743 STAT1 JASPAR yes 21295191
chr17 73073732 73073743 STAT3 JASPAR yes 21295192
chr17 73073732 73073743 STAT1 JASPAR yes 55931219
chr17 73073732 73073743 STAT3 JASPAR yes 55931220
chr17 73073743 73073751 EHF JASPAR yes 21295193
chr17 73073743 73073751 EHF JASPAR yes 55931221
chr17 73073768 73073772 ESR1 TRANSFAC yes 21295194
chr17 73073768 73073772 ESR1 TRANSFAC yes 55931222
chr17 73073774 73073778 ESR1 TRANSFAC yes 21295195
chr17 73073774 73073778 ESR1 TRANSFAC yes 55931223
chr17 73073809 73073818 TFAP2A JASPAR yes 21295196
chr17 73073809 73073818 TFAP2A JASPAR yes 55931224
chr17 73073814 73073825 NRF1 JASPAR yes 21295197
chr17 73073814 73073825 NRF1 JASPAR yes 55931225
chr17 73073823 73073828 SP1 TRANSFAC yes 21295198
chr17 73073823 73073828 SP1 TRANSFAC yes 55931226
chr17 73073829 73073837 MEIS2 JASPAR yes 21295199
chr17 73073829 73073837 MEIS3 JASPAR yes 21295200
chr17 73073829 73073837 MEIS2 JASPAR yes 55931227
chr17 73073829 73073837 MEIS3 JASPAR yes 55931228
chr17 73073834 73073851 ZNF410 JASPAR yes 21295201
chr17 73073834 73073851 ZNF410 JASPAR yes 55931229
chr17 73073838 73073853 MEF2A JASPAR yes 21295202
chr17 73073838 73073853 MEF2A JASPAR yes 55931230
chr17 73073839 73073849 HOXA13 JASPAR yes 21295203
chr17 73073839 73073849 HOXB13 JASPAR yes 21295204
chr17 73073839 73073849 HOXD13 JASPAR yes 21295205
chr17 73073839 73073849 HOXA13 JASPAR yes 55931231
chr17 73073839 73073849 HOXB13 JASPAR yes 55931232
chr17 73073839 73073849 HOXD13 JASPAR yes 55931233
chr17 73073839 73073851 MEF2A JASPAR yes 21295206
chr17 73073839 73073851 MEF2D JASPAR yes 21295207
chr17 73073839 73073851 MEF2A JASPAR yes 55931234
chr17 73073839 73073851 MEF2D JASPAR yes 55931235
chr17 73073840 73073850 MEF2A JASPAR yes 21295208
chr17 73073840 73073850 MEF2A JASPAR yes 55931236
chr17 73073875 73073886 E2F1 JASPAR yes 21295209
chr17 73073875 73073886 E2F1 JASPAR yes 55931237
chr17 73073903 73073909 YY1 JASPAR yes 21295210
chr17 73073903 73073909 YY1 JASPAR yes 55931238
chr17 73073907 73073915 TBX15 JASPAR yes 21295211
chr17 73073907 73073915 TBX15 JASPAR yes 55931239
chr17 73073910 73073924 GLIS3 JASPAR yes 21295212
chr17 73073910 73073924 GLIS3 JASPAR yes 55931240
chr17 73073934 73073946 E2F8 JASPAR yes 21295213
chr17 73073934 73073946 E2F8 JASPAR yes 55931241
chr17 73073937 73073952 RUNX2 JASPAR yes 21295214
chr17 73073937 73073952 RUNX2 JASPAR yes 55931242
chr17 73073939 73073954 RFX5 JASPAR yes 21295215
chr17 73073939 73073954 RFX5 JASPAR yes 55931243
chr17 73073944 73073963 CTCF JASPAR yes 21295216
chr17 73073944 73073963 CTCF JASPAR yes 55931244
chr17 73073945 73073959 ZIC1 JASPAR yes 21295217
chr17 73073945 73073959 ZIC1 JASPAR yes 55931245
chr17 73073960 73073968 OTX1 JASPAR yes 21295218
chr17 73073960 73073968 OTX2 JASPAR yes 21295219
chr17 73073960 73073968 OTX1 JASPAR yes 55931246
chr17 73073960 73073968 OTX2 JASPAR yes 55931247
chr17 73073973 73073988 TFAP2C JASPAR yes 21295220
chr17 73073973 73073988 TFAP2C JASPAR yes 55931248
chr17 73073975 73073987 INSM1 JASPAR yes 21295221
chr17 73073975 73073987 TFAP2A JASPAR yes 21295222
chr17 73073975 73073987 INSM1 JASPAR yes 55931249
chr17 73073975 73073987 TFAP2A JASPAR yes 55931250
chr17 73073975 73073990 TFAP2A JASPAR yes 21295223
chr17 73073975 73073990 TFAP2A JASPAR yes 55931251
chr17 73073976 73073987 TFAP2A JASPAR yes 21295224
chr17 73073976 73073987 TFAP2B JASPAR yes 21295225
chr17 73073976 73073987 TFAP2C JASPAR yes 21295226
chr17 73073976 73073987 TFAP2A JASPAR yes 55931252
chr17 73073976 73073987 TFAP2B JASPAR yes 55931253
chr17 73073976 73073987 TFAP2C JASPAR yes 55931254
chr17 73073977 73073986 TFAP2A JASPAR yes 21295227
chr17 73073977 73073986 TFAP2A JASPAR yes 55931255
chr17 73073980 73074001 REST JASPAR yes 21295228
chr17 73073980 73074001 REST JASPAR yes 55931256
chr17 73073988 73073993 TFAP2A TRANSFAC yes 21295229
chr17 73073988 73073993 TFAP2A TRANSFAC yes 55931257
chr17 73073988 73073994 MZF1 JASPAR yes 21295230
chr17 73073988 73073994 MZF1 JASPAR yes 55931258
chr17 73073989 73074002 NFKB2 JASPAR yes 21295231
chr17 73073989 73074002 NFKB2 JASPAR yes 55931259
chr17 73073990 73074001 NFKB1 JASPAR yes 21295232
chr17 73073990 73074001 NFKB1 JASPAR yes 55931260
chr17 73073991 73074001 NFKB1 JASPAR yes 21295233
chr17 73073991 73074001 NFKB1 JASPAR yes 55931261
chr17 73074000 73074016 ZNF143 JASPAR yes 21295234
chr17 73074000 73074016 ZNF143 JASPAR yes 55931262
chr17 73074000 73074020 RREB1 JASPAR yes 21295235
chr17 73074000 73074020 RREB1 JASPAR yes 55931263
chr17 73074002 73074017 RUNX2 JASPAR yes 21295236
chr17 73074002 73074017 RUNX2 JASPAR yes 55931264
chr17 73074009 73074019 SP1 JASPAR yes 21295237
chr17 73074009 73074019 SP1 JASPAR yes 55931265
chr17 73074012 73074017 SP1 TRANSFAC yes 21295238
chr17 73074012 73074017 SP1 TRANSFAC yes 55931266
chr17 73074015 73074025 RELA JASPAR yes 21295239
chr17 73074015 73074025 REL JASPAR yes 21295240
chr17 73074015 73074025 RELA JASPAR yes 55931267
chr17 73074015 73074025 REL JASPAR yes 55931268
chr17 73074015 73074026 NFKB1 JASPAR yes 21295241
chr17 73074015 73074026 NFKB1 JASPAR yes 55931269
chr17 73074016 73074026 NFKB1 JASPAR yes 21295242
chr17 73074016 73074026 NFKB1 JASPAR yes 55931270
SNP sites on vista25958[chr17:73073656-73074040]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 73073743 rs73350516 G T
CTCF EHF ELF1 POLR2A STAT1 STAT3
5053705
chr17 73073756 rs371858588 C A
CTCF POLR2A
5053706
chr17 73073871 rs541290957 T C
CTCF POLR2A RELA RUNX3
5053707
Genes possibly regulated by vista25958[chr17:73073656-73074040]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 72983727 73001895 + CDR2L ENSG00000109089.7 72983727 0.75 1.0 16234 10071
chr17 73008765 73017356 + ICT1 ENSG00000167862.5 73008765 0.56 1.0 16235 35109
chr17 73028670 73061984 + KCTD2 ENSG00000180901.6 73028670 0.67 1.0 16236 55014
chr17 73034958 73043080 - ATP5H ENSG00000167863.7 73043080 0.58 0.99 16237 69424
chr17 73083822 73102257 + SLC16A5 ENSG00000170190.11 73083822 0.87 1.0 16238 90218
chr17 73106047 73126360 + ARMC7 ENSG00000125449.2 73106047 0.76 1.0 16239 67993
chr17 73126320 73127890 - NT5C ENSG00000125458.2 73127890 0.59 1.0 16240 46150
chr17 73131343 73164376 - HN1 ENSG00000189159.11 73164376 0.91 1.0 16241 9664
Expression level of Genes
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miRNAs possibly regulated by vista25958[chr17:73073656-73074040]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results