EnhancerDB
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  3. vista25960[chr17:73087456-73087829]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25960[chr17:73087456-73087829]
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Tissue distribution of vista25960
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Transcription factor that possibly regulate vista25960[chr17:73087456-73087829]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 73087465 73087480 TFAP2A JASPAR yes 21295299
chr17 73087465 73087480 TFAP2C JASPAR yes 21295300
chr17 73087465 73087480 TFAP2A JASPAR yes 55931975
chr17 73087465 73087480 TFAP2C JASPAR yes 55931976
chr17 73087471 73087492 ZNF263 JASPAR yes 21295301
chr17 73087471 73087492 ZNF263 JASPAR yes 55931977
chr17 73087483 73087504 ZNF263 JASPAR yes 21295302
chr17 73087483 73087504 ZNF263 JASPAR yes 55931978
chr17 73087484 73087491 CEBPA TRANSFAC yes 21295303
chr17 73087484 73087491 CEBPA TRANSFAC yes 55931979
chr17 73087520 73087539 CTCF JASPAR yes 21295304
chr17 73087520 73087539 CTCF JASPAR yes 55931980
chr17 73087529 73087547 RARA JASPAR yes 21295305
chr17 73087529 73087547 RARA JASPAR yes 55931981
chr17 73087531 73087535 LFA1 TRANSFAC yes 21295306
chr17 73087531 73087535 LFA1 TRANSFAC yes 55931982
chr17 73087539 73087543 LFA1 TRANSFAC yes 21295307
chr17 73087539 73087543 LFA1 TRANSFAC yes 55931983
chr17 73087558 73087568 MAX JASPAR yes 21295308
chr17 73087558 73087568 MAX JASPAR yes 55931984
chr17 73087564 73087584 PPARG JASPAR yes 21295309
chr17 73087564 73087584 PPARG JASPAR yes 55931985
chr17 73087565 73087571 ESR1 TRANSFAC yes 21295310
chr17 73087565 73087571 ESR1 TRANSFAC yes 55931986
chr17 73087567 73087571 ESR1 TRANSFAC yes 21295311
chr17 73087567 73087571 ESR1 TRANSFAC yes 55931987
chr17 73087577 73087588 TBX20 JASPAR yes 21295312
chr17 73087577 73087588 TBX20 JASPAR yes 55931988
chr17 73087578 73087588 TBX21 JASPAR yes 21295313
chr17 73087578 73087588 TBX21 JASPAR yes 55931989
chr17 73087579 73087587 MGA JASPAR yes 21295314
chr17 73087579 73087587 TBX15 JASPAR yes 21295315
chr17 73087579 73087587 TBX1 JASPAR yes 21295316
chr17 73087579 73087587 TBX4 JASPAR yes 21295317
chr17 73087579 73087587 TBX5 JASPAR yes 21295318
chr17 73087579 73087587 MGA JASPAR yes 55931990
chr17 73087579 73087587 TBX15 JASPAR yes 55931991
chr17 73087579 73087587 TBX1 JASPAR yes 55931992
chr17 73087579 73087587 TBX4 JASPAR yes 55931993
chr17 73087579 73087587 TBX5 JASPAR yes 55931994
chr17 73087582 73087597 TFAP2A JASPAR yes 21295319
chr17 73087582 73087597 TFAP2C JASPAR yes 21295320
chr17 73087582 73087597 TFAP2A JASPAR yes 55931995
chr17 73087582 73087597 TFAP2C JASPAR yes 55931996
chr17 73087583 73087594 TFAP2A JASPAR yes 21295321
chr17 73087583 73087594 TFAP2B JASPAR yes 21295322
chr17 73087583 73087594 TFAP2C JASPAR yes 21295323
chr17 73087583 73087594 TFAP2A JASPAR yes 55931997
chr17 73087583 73087594 TFAP2B JASPAR yes 55931998
chr17 73087583 73087594 TFAP2C JASPAR yes 55931999
chr17 73087601 73087621 ESR1 JASPAR yes 21295324
chr17 73087601 73087621 ESR1 JASPAR yes 55932000
chr17 73087608 73087612 ESR1 TRANSFAC yes 21295325
chr17 73087608 73087612 ESR1 TRANSFAC yes 55932001
chr17 73087608 73087619 ESRRA JASPAR yes 21295326
chr17 73087608 73087619 ESRRA JASPAR yes 55932002
chr17 73087617 73087622 SP1 TRANSFAC yes 21295327
chr17 73087617 73087622 SP1 TRANSFAC yes 55932003
chr17 73087624 73087640 ZNF143 JASPAR yes 21295328
chr17 73087624 73087640 ZNF143 JASPAR yes 55932004
chr17 73087631 73087635 H4TF2 TRANSFAC yes 21295329
chr17 73087631 73087635 H4TF2 TRANSFAC yes 55932005
chr17 73087639 73087645 MAZ TRANSFAC yes 21295330
chr17 73087639 73087645 MAZ TRANSFAC yes 55932006
chr17 73087642 73087648 SP1 TRANSFAC yes 21295331
chr17 73087642 73087648 SP1 TRANSFAC yes 55932007
chr17 73087643 73087648 SP1 TRANSFAC yes 21295332
chr17 73087643 73087648 SP1 TRANSFAC yes 55932008
chr17 73087651 73087656 NFY TRANSFAC yes 21295333
chr17 73087651 73087656 NFY TRANSFAC yes 55932009
chr17 73087671 73087686 NR2C2 JASPAR yes 21295334
chr17 73087671 73087686 NR2C2 JASPAR yes 55932010
chr17 73087683 73087704 REST JASPAR yes 21295335
chr17 73087683 73087704 REST JASPAR yes 55932011
chr17 73087684 73087703 REST JASPAR yes 21295336
chr17 73087684 73087703 REST JASPAR yes 55932012
chr17 73087715 73087730 TFAP2C JASPAR yes 21295337
chr17 73087715 73087730 TFAP2C JASPAR yes 55932013
chr17 73087716 73087728 TFAP2A JASPAR yes 21295338
chr17 73087716 73087728 TFAP2A JASPAR yes 55932014
chr17 73087720 73087731 E2F6 JASPAR yes 21295339
chr17 73087720 73087731 E2F6 JASPAR yes 55932015
chr17 73087724 73087729 ETS2 TRANSFAC yes 21295340
chr17 73087724 73087729 ETS2 TRANSFAC yes 55932016
chr17 73087746 73087752 NFIC JASPAR yes 21295341
chr17 73087746 73087752 NFIC JASPAR yes 55932017
chr17 73087749 73087759 GABPA JASPAR yes 21295342
chr17 73087749 73087759 GABPA JASPAR yes 55932018
chr17 73087749 73087760 ELK4 JASPAR yes 21295343
chr17 73087749 73087760 FLI1 JASPAR yes 21295344
chr17 73087749 73087760 ELK4 JASPAR yes 55932019
chr17 73087749 73087760 FLI1 JASPAR yes 55932020
chr17 73087752 73087762 SP1 JASPAR yes 21295345
chr17 73087752 73087762 SP1 JASPAR yes 55932021
chr17 73087760 73087774 STAT1 JASPAR yes 21295346
chr17 73087760 73087774 STAT1 JASPAR yes 55932022
chr17 73087768 73087772 YY1 TRANSFAC yes 21295347
chr17 73087768 73087772 YY1 TRANSFAC yes 55932023
chr17 73087790 73087801 EBF1 JASPAR yes 21295348
chr17 73087790 73087801 EBF1 JASPAR yes 55932024
chr17 73087791 73087797 MZF1 JASPAR yes 21295349
chr17 73087791 73087797 MZF1 JASPAR yes 55932025
chr17 73087796 73087813 RARA JASPAR yes 21295350
chr17 73087796 73087813 RARA JASPAR yes 55932026
chr17 73087811 73087821 SREBF2 JASPAR yes 21295351
chr17 73087811 73087821 SREBF2 JASPAR yes 55932027
chr17 73087812 73087827 NR2C2 JASPAR yes 21295352
chr17 73087812 73087827 NR2C2 JASPAR yes 55932028
chr17 73087812 73087833 ZNF263 JASPAR yes 21295353
chr17 73087812 73087833 ZNF263 JASPAR yes 55932029
chr17 73087813 73087827 RXRB JASPAR yes 21295354
chr17 73087813 73087827 RXRB JASPAR yes 55932030
chr17 73087822 73087828 MAZ TRANSFAC yes 21295355
chr17 73087822 73087828 MAZ TRANSFAC yes 55932031
chr17 73087822 73087833 E2F6 JASPAR yes 21295356
chr17 73087822 73087833 E2F6 JASPAR yes 55932032
SNP sites on vista25960[chr17:73087456-73087829]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 73087456 rs548595108 C T no 5053846
chr17 73087513 rs568451640 G A no 5053847
chr17 73087555 rs148018848 C T no 5053848
chr17 73087781 rs34183507 A T no 5053849
Genes possibly regulated by vista25960[chr17:73087456-73087829]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 73008765 73017356 + ICT1 ENSG00000167862.5 73008765 0.56 1.0 16235 21309
chr17 73028670 73061984 + KCTD2 ENSG00000180901.6 73028670 0.67 1.0 16236 41214
chr17 73034958 73043080 - ATP5H ENSG00000167863.7 73043080 0.58 0.99 16237 55624
chr17 73083822 73102257 + SLC16A5 ENSG00000170190.11 73083822 0.87 1.0 16238 96366
chr17 73106047 73126360 + ARMC7 ENSG00000125449.2 73106047 0.76 1.0 16239 81782
chr17 73126320 73127890 - NT5C ENSG00000125458.2 73127890 0.59 1.0 16240 59939
chr17 73131343 73164376 - HN1 ENSG00000189159.11 73164376 0.91 1.0 16241 23453
chr17 73163408 73179078 - SUMO2 ENSG00000188612.7 73179078 0.73 0.99 16242 8751
Expression level of Genes
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miRNAs possibly regulated by vista25960[chr17:73087456-73087829]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results