EnhancerDB
  1. Home
  2. Enhancers
  3. vista25965[chr17:73291742-73292218]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25965[chr17:73291742-73292218]
Back to top
Tissue distribution of vista25965
Back to top
Transcription factor that possibly regulate vista25965[chr17:73291742-73292218]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 73291185 73292466 POLR2A UCSC Txn Factor no Conserved 108293176
chr17 73291668 73292184 NFIC UCSC Txn Factor no Conserved 108293266
chr17 73291743 73292144 ATF2 UCSC Txn Factor no Conserved 108293274
chr17 73291754 73292157 FOXM1 UCSC Txn Factor no Conserved 108293279
chr17 73291757 73292207 RUNX3 UCSC Txn Factor no Conserved 108293281
chr17 73291762 73292168 RELA UCSC Txn Factor no Conserved 108293283
chr17 73291775 73292048 SPI1 UCSC Txn Factor no Conserved 108293287
chr17 73291805 73292095 MEF2A UCSC Txn Factor no Conserved 108293291
chr17 73291822 73292202 TBP UCSC Txn Factor no Conserved 108293296
chr17 73291782 73291792 SREBF2 JASPAR yes 21295548
chr17 73291782 73291792 SREBF2 JASPAR yes 55941189
chr17 73291788 73291798 RORA JASPAR yes 21295549
chr17 73291788 73291798 RORA JASPAR yes 55941190
chr17 73291811 73291815 YY1 TRANSFAC yes 21295550
chr17 73291811 73291815 YY1 TRANSFAC yes 55941191
chr17 73291826 73291830 YY1 TRANSFAC yes 21295551
chr17 73291826 73291830 YY1 TRANSFAC yes 55941192
chr17 73291831 73291835 YY1 TRANSFAC yes 21295552
chr17 73291831 73291835 YY1 TRANSFAC yes 55941193
chr17 73291845 73291853 FOXL1 JASPAR yes 21295553
chr17 73291845 73291853 FOXL1 JASPAR yes 55941194
chr17 73291857 73291878 IRF1 JASPAR yes 21295554
chr17 73291857 73291878 IRF1 JASPAR yes 55941195
chr17 73291859 73291874 IRF9 JASPAR yes 21295555
chr17 73291859 73291874 IRF9 JASPAR yes 55941196
chr17 73291861 73291875 STAT1 JASPAR yes 21295556
chr17 73291861 73291875 STAT1 JASPAR yes 55941197
chr17 73291861 73291876 PRDM1 JASPAR yes 21295557
chr17 73291861 73291876 STAT2 JASPAR yes 21295558
chr17 73291861 73291876 PRDM1 JASPAR yes 55941198
chr17 73291861 73291876 STAT2 JASPAR yes 55941199
chr17 73291861 73291879 IRF2 JASPAR yes 21295559
chr17 73291861 73291879 IRF2 JASPAR yes 55941200
chr17 73291868 73291882 STAT1 JASPAR yes 21295560
chr17 73291868 73291882 STAT1 JASPAR yes 55941201
chr17 73291868 73291883 STAT2 JASPAR yes 21295561
chr17 73291868 73291883 STAT2 JASPAR yes 55941202
chr17 73291872 73291890 NR3C1 JASPAR yes 21295562
chr17 73291872 73291890 NR3C1 JASPAR yes 55941203
chr17 73291880 73291883 MYB TRANSFAC yes 21295563
chr17 73291880 73291883 MYB TRANSFAC yes 55941204
chr17 73291898 73291903 TFAP2A TRANSFAC yes 21295564
chr17 73291898 73291903 TFAP2A TRANSFAC yes 55941205
chr17 73291898 73291904 MZF1 JASPAR yes 21295565
chr17 73291898 73291904 MZF1 JASPAR yes 55941206
chr17 73291900 73291905 ETS2 TRANSFAC yes 21295566
chr17 73291900 73291905 ETS2 TRANSFAC yes 55941207
chr17 73291900 73291914 STAT1 JASPAR yes 21295567
chr17 73291900 73291914 STAT1 JASPAR yes 55941208
chr17 73291915 73291929 BATF3 JASPAR yes 21295568
chr17 73291915 73291929 BATF3 JASPAR yes 55941209
chr17 73291947 73291957 HOXA13 JASPAR yes 21295569
chr17 73291947 73291957 HOXB13 JASPAR yes 21295570
chr17 73291947 73291957 HOXD13 JASPAR yes 21295571
chr17 73291947 73291957 HOXA13 JASPAR yes 55941210
chr17 73291947 73291957 HOXB13 JASPAR yes 55941211
chr17 73291947 73291957 HOXD13 JASPAR yes 55941212
chr17 73291949 73291953 TEAD2 TRANSFAC yes 21295572
chr17 73291949 73291953 TEAD2 TRANSFAC yes 55941213
chr17 73291949 73291954 TBP TRANSFAC yes 21295573
chr17 73291949 73291954 TBP TRANSFAC yes 55941214
chr17 73291949 73291955 TFIID TRANSFAC yes 21295574
chr17 73291949 73291955 TFIID TRANSFAC yes 55941215
chr17 73291964 73291974 RELA JASPAR yes 21295575
chr17 73291964 73291974 RELA JASPAR yes 55941216
chr17 73291964 73291975 NFKB1 JASPAR yes 21295576
chr17 73291964 73291975 NFKB1 JASPAR yes 55941217
chr17 73291972 73291978 SP1 TRANSFAC yes 21295577
chr17 73291972 73291978 SP1 TRANSFAC yes 55941218
chr17 73291972 73291982 SP1 JASPAR yes 21295578
chr17 73291972 73291982 SP1 JASPAR yes 55941219
chr17 73292002 73292009 E2F1 TRANSFAC yes 21295579
chr17 73292002 73292009 E2F1 TRANSFAC yes 55941220
chr17 73292002 73292013 ESRRB JASPAR yes 21295580
chr17 73292002 73292013 ESRRB JASPAR yes 55941221
chr17 73292027 73292031 YY1 TRANSFAC yes 21295581
chr17 73292027 73292031 YY1 TRANSFAC yes 55941222
chr17 73292031 73292043 NHLH1 JASPAR yes 21295582
chr17 73292031 73292043 NHLH1 JASPAR yes 55941223
chr17 73292032 73292042 MSC JASPAR yes 21295583
chr17 73292032 73292042 NHLH1 JASPAR yes 21295584
chr17 73292032 73292042 MSC JASPAR yes 55941224
chr17 73292032 73292042 NHLH1 JASPAR yes 55941225
chr17 73292069 73292075 MYC TRANSFAC yes 21295585
chr17 73292069 73292075 MYC TRANSFAC yes 55941226
chr17 73292074 73292077 MYB TRANSFAC yes 21295586
chr17 73292074 73292077 MYB TRANSFAC yes 55941227
chr17 73292081 73292084 MYB TRANSFAC yes 21295587
chr17 73292081 73292084 MYB TRANSFAC yes 55941228
chr17 73292091 73292095 ESR1 TRANSFAC yes 21295588
chr17 73292091 73292095 ESR1 TRANSFAC yes 55941229
chr17 73292152 73292155 MYB TRANSFAC yes 21295589
chr17 73292152 73292155 MYB TRANSFAC yes 55941230
chr17 73292152 73292167 PRDM1 JASPAR yes 21295590
chr17 73292152 73292167 STAT2 JASPAR yes 21295591
chr17 73292152 73292167 PRDM1 JASPAR yes 55941231
chr17 73292152 73292167 STAT2 JASPAR yes 55941232
chr17 73292156 73292172 SRF JASPAR yes 21295592
chr17 73292156 73292172 SRF JASPAR yes 55941233
chr17 73292157 73292162 ETS2 TRANSFAC yes 21295593
chr17 73292157 73292162 ETS2 TRANSFAC yes 55941234
chr17 73292176 73292181 ETS2 TRANSFAC yes 21295594
chr17 73292176 73292181 ETS2 TRANSFAC yes 55941235
chr17 73292214 73292218 ESR1 TRANSFAC yes 21295595
chr17 73292214 73292218 ESR1 TRANSFAC yes 55941236
chr17 73292215 73292234 PAX5 JASPAR yes 21295596
chr17 73292215 73292234 PAX5 JASPAR yes 55941237
SNP sites on vista25965[chr17:73291742-73292218]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 73291748 rs8066811 G C
ATF2 NFIC POLR2A
5055291
chr17 73291749 rs553896208 G A
ATF2 NFIC POLR2A
5055292
chr17 73291774 rs116978060 C G,T
ATF2 FOXM1 NFIC POLR2A RELA RUNX3
5055293
chr17 73291795 rs150813563 G A,T
ATF2 FOXM1 NFIC POLR2A RELA RORA RUNX3 SPI1
5055294
chr17 73291800 rs115535584 G A
ATF2 FOXM1 NFIC POLR2A RELA RUNX3 SPI1
5055295
chr17 73291885 rs115150422 G A
ATF2 FOXM1 MEF2A NFIC NR3C1 POLR2A RELA RUNX3 SPI1 TBP
5055296
chr17 73292069 rs76202635 G A
ATF2 FOXM1 MEF2A MYC NFIC POLR2A RELA RUNX3 TBP
5055297
chr17 73292212 rs114597831 G T
POLR2A
5055298
Genes possibly regulated by vista25965[chr17:73291742-73292218]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 73201754 73231853 + NUP85 ENSG00000125450.6 73201754 0.71 1.0 16243 10012
chr17 73232694 73258444 - GGA3 ENSG00000125447.12 73258444 0.62 1.0 16244 66702
chr17 73257755 73262454 + MRPS7 ENSG00000125445.6 73257755 0.8 0.99 16245 66013
chr17 73262309 73267308 - MIF4GD ENSG00000125457.9 73267308 0.69 1.0 16246 75566
chr17 73269073 73285591 - SLC25A19 ENSG00000125454.7 73285591 0.92 1.0 16247 93849
Expression level of Genes
Back to top
miRNAs possibly regulated by vista25965[chr17:73291742-73292218]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results