EnhancerDB
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  3. vista25984[chr17:73545364-73545732]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25984[chr17:73545364-73545732]
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Tissue distribution of vista25984
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Transcription factor that possibly regulate vista25984[chr17:73545364-73545732]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 73545360 73546463 POLR2A UCSC Txn Factor no Conserved 108294362
chr17 73545360 73546463 POLR2A UCSC Txn Factor no Conserved 108294363
chr17 73545379 73545856 MYC UCSC Txn Factor no Conserved 108294365
chr17 73545413 73545759 NR3C1 UCSC Txn Factor no Conserved 108294368
chr17 73545431 73546091 ZNF263 UCSC Txn Factor no Conserved 108294370
chr17 73545431 73546091 ZNF263 UCSC Txn Factor no Conserved 108294371
chr17 73545478 73545760 USF1 UCSC Txn Factor no Conserved 108294382
chr17 73545350 73545371 ZNF263 JASPAR yes 21296511
chr17 73545350 73545371 ZNF263 JASPAR yes 55962582
chr17 73545372 73545380 SF1 TRANSFAC yes 21296512
chr17 73545372 73545380 SF1 TRANSFAC yes 55962585
chr17 73545372 73545383 ESRRB JASPAR yes 21296513
chr17 73545372 73545383 ESRRB JASPAR yes 55962586
chr17 73545379 73545391 GRHL1 JASPAR yes 21296514
chr17 73545379 73545391 GRHL1 JASPAR yes 55962587
chr17 73545393 73545403 MYF6 JASPAR yes 21296515
chr17 73545393 73545403 MYF6 JASPAR yes 55962588
chr17 73545417 73545429 TFAP2A JASPAR yes 21296516
chr17 73545417 73545429 TFAP2B JASPAR yes 21296517
chr17 73545417 73545429 TFAP2C JASPAR yes 21296518
chr17 73545417 73545429 TFAP2A JASPAR yes 55962589
chr17 73545417 73545429 TFAP2B JASPAR yes 55962590
chr17 73545417 73545429 TFAP2C JASPAR yes 55962591
chr17 73545440 73545460 RREB1 JASPAR yes 21296519
chr17 73545440 73545460 RREB1 JASPAR yes 55962592
chr17 73545455 73545468 TFAP2A JASPAR yes 21296520
chr17 73545455 73545468 TFAP2A JASPAR yes 55962593
chr17 73545461 73545472 FOXA1 JASPAR yes 21296521
chr17 73545461 73545472 FOXA1 JASPAR yes 55962594
chr17 73545461 73545476 FOXA1 JASPAR yes 21296522
chr17 73545461 73545476 FOXA1 JASPAR yes 55962595
chr17 73545463 73545467 LFA1 TRANSFAC yes 21296523
chr17 73545463 73545467 LFA1 TRANSFAC yes 55962596
chr17 73545501 73545511 ID4 JASPAR yes 21296524
chr17 73545501 73545511 NHLH1 JASPAR yes 21296525
chr17 73545501 73545511 TCF3 JASPAR yes 21296526
chr17 73545501 73545511 TCF4 JASPAR yes 21296527
chr17 73545501 73545511 ID4 JASPAR yes 55962597
chr17 73545501 73545511 NHLH1 JASPAR yes 55962598
chr17 73545501 73545511 TCF3 JASPAR yes 55962599
chr17 73545501 73545511 TCF4 JASPAR yes 55962600
chr17 73545502 73545511 SNAI2 JASPAR yes 21296528
chr17 73545502 73545511 SNAI2 JASPAR yes 55962601
chr17 73545503 73545508 USF2 TRANSFAC yes 21296529
chr17 73545503 73545508 USF2 TRANSFAC yes 55962602
chr17 73545512 73545523 NFKB1 JASPAR yes 21296530
chr17 73545512 73545523 NFKB1 JASPAR yes 55962603
chr17 73545527 73545536 HIC2 JASPAR yes 21296531
chr17 73545527 73545536 HIC2 JASPAR yes 55962604
chr17 73545541 73545545 NFE TRANSFAC yes 21296532
chr17 73545541 73545545 NFE TRANSFAC yes 55962605
chr17 73545544 73545558 PLAG1 JASPAR yes 21296533
chr17 73545544 73545558 PLAG1 JASPAR yes 55962606
chr17 73545544 73545559 TFAP2A JASPAR yes 21296534
chr17 73545544 73545559 TFAP2C JASPAR yes 21296535
chr17 73545544 73545559 TFAP2A JASPAR yes 55962607
chr17 73545544 73545559 TFAP2C JASPAR yes 55962608
chr17 73545545 73545559 PLAG1 JASPAR yes 21296536
chr17 73545545 73545559 PLAG1 JASPAR yes 55962609
chr17 73545556 73545567 FOXA1 JASPAR yes 21296537
chr17 73545556 73545567 FOXA1 JASPAR yes 55962610
chr17 73545560 73545577 NR3C2 JASPAR yes 21296538
chr17 73545560 73545577 NR3C2 JASPAR yes 55962611
chr17 73545562 73545577 AR JASPAR yes 21296539
chr17 73545562 73545577 AR JASPAR yes 55962612
chr17 73545575 73545586 NFE2L2 JASPAR yes 21296540
chr17 73545575 73545586 NFE2L2 JASPAR yes 55962613
chr17 73545584 73545598 ZIC1 JASPAR yes 21296541
chr17 73545584 73545598 ZIC1 JASPAR yes 55962614
chr17 73545595 73545613 ESR2 JASPAR yes 21296542
chr17 73545595 73545613 ESR2 JASPAR yes 55962615
chr17 73545642 73545654 PKNOX1 JASPAR yes 21296543
chr17 73545642 73545654 PKNOX2 JASPAR yes 21296544
chr17 73545642 73545654 TGIF2 JASPAR yes 21296545
chr17 73545642 73545654 PKNOX1 JASPAR yes 55962616
chr17 73545642 73545654 PKNOX2 JASPAR yes 55962617
chr17 73545642 73545654 TGIF2 JASPAR yes 55962618
chr17 73545643 73545653 SREBF1 JASPAR yes 21296546
chr17 73545643 73545653 SREBF2 JASPAR yes 21296547
chr17 73545643 73545653 TFEC JASPAR yes 21296548
chr17 73545643 73545653 SREBF1 JASPAR yes 55962619
chr17 73545643 73545653 SREBF2 JASPAR yes 55962620
chr17 73545643 73545653 TFEC JASPAR yes 55962621
chr17 73545643 73545654 USF1 JASPAR yes 21296549
chr17 73545643 73545654 USF2 JASPAR yes 21296550
chr17 73545643 73545654 USF1 JASPAR yes 55962622
chr17 73545643 73545654 USF2 JASPAR yes 55962623
chr17 73545644 73545662 ESR1 JASPAR yes 21296551
chr17 73545644 73545662 ESR1 JASPAR yes 55962624
chr17 73545648 73545656 MEIS2 JASPAR yes 21296552
chr17 73545648 73545656 MEIS3 JASPAR yes 21296553
chr17 73545648 73545656 MEIS2 JASPAR yes 55962625
chr17 73545648 73545656 MEIS3 JASPAR yes 55962626
chr17 73545649 73545661 PKNOX1 JASPAR yes 21296554
chr17 73545649 73545661 PKNOX2 JASPAR yes 21296555
chr17 73545649 73545661 TGIF1 JASPAR yes 21296556
chr17 73545649 73545661 TGIF2 JASPAR yes 21296557
chr17 73545649 73545661 PKNOX1 JASPAR yes 55962627
chr17 73545649 73545661 PKNOX2 JASPAR yes 55962628
chr17 73545649 73545661 TGIF1 JASPAR yes 55962629
chr17 73545649 73545661 TGIF2 JASPAR yes 55962630
chr17 73545665 73545671 MAZ TRANSFAC yes 21296558
chr17 73545665 73545671 MAZ TRANSFAC yes 55962631
chr17 73545676 73545687 E2F1 JASPAR yes 21296559
chr17 73545676 73545687 E2F1 JASPAR yes 55962632
chr17 73545684 73545699 STAT1 JASPAR yes 21296560
chr17 73545684 73545699 STAT1 JASPAR yes 55962633
chr17 73545686 73545697 STAT1 JASPAR yes 21296561
chr17 73545686 73545697 STAT3 JASPAR yes 21296562
chr17 73545686 73545697 STAT1 JASPAR yes 55962634
chr17 73545686 73545697 STAT3 JASPAR yes 55962635
chr17 73545722 73545739 ESR1 JASPAR yes 21296563
chr17 73545722 73545739 ESR1 JASPAR yes 55962636
chr17 73545723 73545743 ESR1 JASPAR yes 21296564
chr17 73545723 73545743 ESR1 JASPAR yes 55962637
chr17 73545724 73545728 LFA1 TRANSFAC yes 21296565
chr17 73545724 73545728 LFA1 TRANSFAC yes 55962638
SNP sites on vista25984[chr17:73545364-73545732]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 73545416 rs140158421 G A,T
MYC NR3C1 POLR2A
5057771
chr17 73545424 rs74512764 C T
MYC NR3C1 POLR2A TFAP2A TFAP2B TFAP2C
5057772
chr17 73545496 rs538470552 C T
MYC NR3C1 POLR2A USF1 ZNF263
5057773
chr17 73545530 rs137856107 G A
HIC2 MYC NR3C1 POLR2A USF1 ZNF263
5057774
chr17 73545541 rs4077852 T C
MYC NFE NR3C1 POLR2A USF1 ZNF263
5057775
chr17 73545683 rs7502353 G A,T
E2F1 MYC NR3C1 POLR2A USF1 ZNF263
5057776
chr17 73545684 rs532193752 C T
E2F1 MYC NR3C1 POLR2A STAT1 USF1 ZNF263
5057777
chr17 73545725 rs546085461 G A,T
ESR1 LFA1 MYC NR3C1 POLR2A USF1 ZNF263
5057778
Genes possibly regulated by vista25984[chr17:73545364-73545732]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 73496342 73511664 - CASKIN2 ENSG00000177303.5 73511664 0.81 1.0 16250 66300
chr17 73512141 73520820 + TSEN54 ENSG00000182173.8 73512141 0.64 1.0 16251 66777
chr17 73521161 73571289 + LLGL2 ENSG00000073350.9 73521161 0.82 1.0 16252 75797
chr17 73584139 73622929 + MYO15B ENSG00000266714.2 73584139 0.83 1.0 16253 61593
chr17 73629514 73637484 + SMIM5 ENSG00000204323.5 73629514 0.9 1.0 16255 16218
chr17 73642323 73644057 + SMIM6 ENSG00000259120.2 73642323 0.91 0.99 16256 3409
Expression level of Genes
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miRNAs possibly regulated by vista25984[chr17:73545364-73545732]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results