EnhancerDB
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  3. vista25985[chr17:73546030-73546166]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25985[chr17:73546030-73546166]
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Tissue distribution of vista25985
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Transcription factor that possibly regulate vista25985[chr17:73546030-73546166]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 73545360 73546463 POLR2A UCSC Txn Factor no Conserved 108294362
chr17 73545360 73546463 POLR2A UCSC Txn Factor no Conserved 108294363
chr17 73545431 73546091 ZNF263 UCSC Txn Factor no Conserved 108294370
chr17 73545431 73546091 ZNF263 UCSC Txn Factor no Conserved 108294371
chr17 73546045 73546247 E2F1 UCSC Txn Factor no Conserved 108294420
chr17 73546027 73546033 TCF4 TRANSFAC yes 21296566
chr17 73546027 73546033 TCF4 TRANSFAC yes 55962666
chr17 73546030 73546051 ZNF263 JASPAR yes 21296567
chr17 73546030 73546051 ZNF263 JASPAR yes 55962667
chr17 73546050 73546058 MEIS2 JASPAR yes 21296568
chr17 73546050 73546058 MEIS3 JASPAR yes 21296569
chr17 73546050 73546058 MEIS2 JASPAR yes 55962668
chr17 73546050 73546058 MEIS3 JASPAR yes 55962669
chr17 73546051 73546055 NFE TRANSFAC yes 21296570
chr17 73546051 73546055 NFE TRANSFAC yes 55962670
chr17 73546051 73546058 MEIS1 JASPAR yes 21296571
chr17 73546051 73546058 MEIS1 JASPAR yes 55962671
chr17 73546056 73546072 SOX4 JASPAR yes 21296572
chr17 73546056 73546072 SOX8 JASPAR yes 21296573
chr17 73546056 73546072 SOX4 JASPAR yes 55962672
chr17 73546056 73546072 SOX8 JASPAR yes 55962673
chr17 73546064 73546073 SOX9 JASPAR yes 21296574
chr17 73546064 73546073 SOX9 JASPAR yes 55962674
chr17 73546081 73546095 NR2F1 JASPAR yes 21296575
chr17 73546081 73546095 NR2F1 JASPAR yes 55962675
chr17 73546082 73546088 NFIC JASPAR yes 21296576
chr17 73546082 73546088 NFIC JASPAR yes 55962676
chr17 73546083 73546095 PKNOX1 JASPAR yes 21296577
chr17 73546083 73546095 TGIF1 JASPAR yes 21296578
chr17 73546083 73546095 PKNOX1 JASPAR yes 55962677
chr17 73546083 73546095 TGIF1 JASPAR yes 55962678
chr17 73546086 73546099 NR2F1 JASPAR yes 21296579
chr17 73546086 73546099 NR2F1 JASPAR yes 55962679
chr17 73546088 73546096 NR4A2 JASPAR yes 21296580
chr17 73546088 73546096 NR4A2 JASPAR yes 55962680
chr17 73546089 73546104 ESR2 JASPAR yes 21296581
chr17 73546089 73546104 ESR2 JASPAR yes 55962681
chr17 73546090 73546094 ESR1 TRANSFAC yes 21296582
chr17 73546090 73546094 ESR1 TRANSFAC yes 55962682
chr17 73546090 73546101 USF1 JASPAR yes 21296583
chr17 73546090 73546101 USF2 JASPAR yes 21296584
chr17 73546090 73546101 USF1 JASPAR yes 55962683
chr17 73546090 73546101 USF2 JASPAR yes 55962684
chr17 73546091 73546098 USF2 TRANSFAC yes 21296585
chr17 73546091 73546098 USF2 TRANSFAC yes 55962685
chr17 73546091 73546101 SREBF2 JASPAR yes 21296586
chr17 73546091 73546101 SREBF2 JASPAR yes 55962686
chr17 73546093 73546098 USF2 TRANSFAC yes 21296587
chr17 73546093 73546098 USF2 TRANSFAC yes 55962687
chr17 73546114 73546124 SP1 JASPAR yes 21296588
chr17 73546114 73546124 SP1 JASPAR yes 55962688
chr17 73546115 73546124 SP1 TRANSFAC yes 21296589
chr17 73546115 73546124 SP1 TRANSFAC yes 55962689
chr17 73546116 73546121 SP1 TRANSFAC yes 21296590
chr17 73546116 73546121 SP1 TRANSFAC yes 55962690
chr17 73546117 73546122 SP1 TRANSFAC yes 21296591
chr17 73546117 73546122 SP1 TRANSFAC yes 55962691
chr17 73546117 73546123 SP1 TRANSFAC yes 21296592
chr17 73546117 73546123 SP1 TRANSFAC yes 55962692
chr17 73546120 73546125 SP1 TRANSFAC yes 21296593
chr17 73546120 73546125 SP1 TRANSFAC yes 55962693
chr17 73546120 73546127 SP1 TRANSFAC yes 21296594
chr17 73546120 73546127 SP1 TRANSFAC yes 55962694
chr17 73546161 73546174 SMAD2 JASPAR yes 21296595
chr17 73546161 73546174 SMAD2 JASPAR yes 55962695
SNP sites on vista25985[chr17:73546030-73546166]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 73546046 rs115174824 A G
E2F1 POLR2A ZNF263
5057788
chr17 73546127 rs545877572 G A
E2F1 POLR2A SP1
5057789
chr17 73546143 rs72859227 G A
E2F1 POLR2A
5057790
chr17 73546145 rs572964115 G A
E2F1 POLR2A
5057791
Genes possibly regulated by vista25985[chr17:73546030-73546166]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 73496342 73511664 - CASKIN2 ENSG00000177303.5 73511664 0.81 1.0 16250 65634
chr17 73512141 73520820 + TSEN54 ENSG00000182173.8 73512141 0.64 1.0 16251 66111
chr17 73521161 73571289 + LLGL2 ENSG00000073350.9 73521161 0.82 1.0 16252 75131
chr17 73584139 73622929 + MYO15B ENSG00000266714.2 73584139 0.83 1.0 16253 62027
chr17 73629514 73637484 + SMIM5 ENSG00000204323.5 73629514 0.9 1.0 16255 16652
chr17 73642323 73644057 + SMIM6 ENSG00000259120.2 73642323 0.91 0.99 16256 3843
Expression level of Genes
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miRNAs possibly regulated by vista25985[chr17:73546030-73546166]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results