EnhancerDB
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  3. vista25990[chr17:73689850-73690283]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista25990[chr17:73689850-73690283]
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Tissue distribution of vista25990
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Transcription factor that possibly regulate vista25990[chr17:73689850-73690283]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 73689690 73690263 NR3C1 UCSC Txn Factor no Conserved 108294468
chr17 73689851 73689870 CTCF JASPAR yes 21296759
chr17 73689851 73689870 CTCF JASPAR yes 55968014
chr17 73689864 73689875 TFAP2C JASPAR yes 21296760
chr17 73689864 73689875 TFAP2C JASPAR yes 55968015
chr17 73689864 73689881 RARA JASPAR yes 21296761
chr17 73689864 73689881 RARA JASPAR yes 55968016
chr17 73689865 73689874 TFAP2A JASPAR yes 21296762
chr17 73689865 73689874 TFAP2A JASPAR yes 55968017
chr17 73689881 73689885 NFE TRANSFAC yes 21296763
chr17 73689881 73689885 NFE TRANSFAC yes 55968018
chr17 73689882 73689903 ZNF263 JASPAR yes 21296764
chr17 73689882 73689903 ZNF263 JASPAR yes 55968019
chr17 73689893 73689899 SP1 TRANSFAC yes 21296765
chr17 73689893 73689899 SP1 TRANSFAC yes 55968020
chr17 73689893 73689903 SP1 JASPAR yes 21296766
chr17 73689893 73689903 SP1 JASPAR yes 55968021
chr17 73689896 73689906 SP1 JASPAR yes 21296767
chr17 73689896 73689906 SP1 JASPAR yes 55968022
chr17 73689901 73689911 SP1 JASPAR yes 21296768
chr17 73689901 73689911 SP1 JASPAR yes 55968023
chr17 73689914 73689927 POU2F2 JASPAR yes 21296769
chr17 73689914 73689927 POU2F2 JASPAR yes 55968024
chr17 73689937 73689948 NRL JASPAR yes 21296770
chr17 73689937 73689948 NRL JASPAR yes 55968025
chr17 73689940 73689951 USF1 JASPAR yes 21296771
chr17 73689940 73689951 USF2 JASPAR yes 21296772
chr17 73689940 73689951 USF1 JASPAR yes 55968026
chr17 73689940 73689951 USF2 JASPAR yes 55968027
chr17 73689943 73689962 CTCF JASPAR yes 21296773
chr17 73689943 73689962 CTCF JASPAR yes 55968028
chr17 73689956 73689971 HNF4A JASPAR yes 21296774
chr17 73689956 73689971 HNF4A JASPAR yes 55968029
chr17 73689957 73689972 HNF4G JASPAR yes 21296775
chr17 73689957 73689972 HNF4G JASPAR yes 55968030
chr17 73689961 73689967 TCF4 TRANSFAC yes 21296776
chr17 73689961 73689967 TCF4 TRANSFAC yes 55968031
chr17 73689967 73689982 RFX5 JASPAR yes 21296777
chr17 73689967 73689982 TFAP2C JASPAR yes 21296778
chr17 73689967 73689982 RFX5 JASPAR yes 55968032
chr17 73689967 73689982 TFAP2C JASPAR yes 55968033
chr17 73689968 73689972 NFE TRANSFAC yes 21296779
chr17 73689968 73689972 NFE TRANSFAC yes 55968034
chr17 73689969 73689984 TFAP2A JASPAR yes 21296780
chr17 73689969 73689984 TFAP2A JASPAR yes 55968035
chr17 73689971 73689977 MZF1 JASPAR yes 21296781
chr17 73689971 73689977 MZF1 JASPAR yes 55968036
chr17 73689975 73689990 TP53 JASPAR yes 21296782
chr17 73689975 73689990 TP53 JASPAR yes 55968037
chr17 73690014 73690020 SOX10 JASPAR yes 21296783
chr17 73690014 73690020 SOX10 JASPAR yes 55968038
chr17 73690034 73690049 AR JASPAR yes 21296784
chr17 73690034 73690049 AR JASPAR yes 55968039
chr17 73690034 73690051 NR3C1 JASPAR yes 21296785
chr17 73690034 73690051 NR3C2 JASPAR yes 21296786
chr17 73690034 73690051 NR3C1 JASPAR yes 55968040
chr17 73690034 73690051 NR3C2 JASPAR yes 55968041
chr17 73690046 73690057 STAT1 JASPAR yes 21296787
chr17 73690046 73690057 STAT3 JASPAR yes 21296788
chr17 73690046 73690057 STAT1 JASPAR yes 55968042
chr17 73690046 73690057 STAT3 JASPAR yes 55968043
chr17 73690050 73690057 NFATC2 JASPAR yes 21296789
chr17 73690050 73690057 NFATC2 JASPAR yes 55968044
chr17 73690051 73690059 FOXO3 JASPAR yes 21296790
chr17 73690051 73690059 FOXO3 JASPAR yes 55968045
chr17 73690095 73690105 GSC2 JASPAR yes 21296791
chr17 73690095 73690105 GSC2 JASPAR yes 55968046
chr17 73690096 73690104 OTX1 JASPAR yes 21296792
chr17 73690096 73690104 OTX2 JASPAR yes 21296793
chr17 73690096 73690104 OTX1 JASPAR yes 55968047
chr17 73690096 73690104 OTX2 JASPAR yes 55968048
chr17 73690107 73690117 NFKB1 JASPAR yes 21296794
chr17 73690107 73690117 NFKB1 JASPAR yes 55968049
chr17 73690126 73690136 MLXIPL JASPAR yes 21296795
chr17 73690126 73690136 MLX JASPAR yes 21296796
chr17 73690126 73690136 MNT JASPAR yes 21296797
chr17 73690126 73690136 TFE3 JASPAR yes 21296798
chr17 73690126 73690136 MLXIPL JASPAR yes 55968050
chr17 73690126 73690136 MLX JASPAR yes 55968051
chr17 73690126 73690136 MNT JASPAR yes 55968052
chr17 73690126 73690136 TFE3 JASPAR yes 55968053
chr17 73690127 73690137 MAX JASPAR yes 21296799
chr17 73690127 73690137 MAX JASPAR yes 55968054
chr17 73690128 73690133 MYC TRANSFAC yes 21296800
chr17 73690128 73690133 USF1 TRANSFAC yes 21296801
chr17 73690128 73690133 USF2 TRANSFAC yes 21296802
chr17 73690128 73690133 MYC TRANSFAC yes 55968055
chr17 73690128 73690133 USF1 TRANSFAC yes 55968056
chr17 73690128 73690133 USF2 TRANSFAC yes 55968057
chr17 73690128 73690135 USF1 JASPAR yes 21296803
chr17 73690128 73690135 USF1 JASPAR yes 55968058
chr17 73690154 73690158 LFA1 TRANSFAC yes 21296804
chr17 73690154 73690158 LFA1 TRANSFAC yes 55968059
chr17 73690157 73690172 STAT1 JASPAR yes 21296805
chr17 73690157 73690172 STAT1 JASPAR yes 55968060
chr17 73690165 73690179 JUN JASPAR yes 21296806
chr17 73690165 73690179 JUN JASPAR yes 55968061
chr17 73690167 73690178 BATF JASPAR yes 21296807
chr17 73690167 73690178 BATF JASPAR yes 55968062
chr17 73690169 73690180 FOS JASPAR yes 21296808
chr17 73690169 73690180 FOSL1 JASPAR yes 21296809
chr17 73690169 73690180 JUND JASPAR yes 21296810
chr17 73690169 73690180 FOS JASPAR yes 55968063
chr17 73690169 73690180 FOSL1 JASPAR yes 55968064
chr17 73690169 73690180 JUND JASPAR yes 55968065
chr17 73690170 73690184 JUN JASPAR yes 21296811
chr17 73690170 73690184 JUN JASPAR yes 55968066
chr17 73690171 73690178 JUN TRANSFAC yes 21296812
chr17 73690171 73690178 JUN TRANSFAC yes 55968067
chr17 73690171 73690182 BATF JASPAR yes 21296813
chr17 73690171 73690182 BATF JASPAR yes 55968068
chr17 73690175 73690195 RREB1 JASPAR yes 21296814
chr17 73690175 73690195 RREB1 JASPAR yes 55968069
chr17 73690186 73690191 SP1 TRANSFAC yes 21296815
chr17 73690186 73690191 SP1 TRANSFAC yes 55968070
chr17 73690197 73690208 E2F6 JASPAR yes 21296816
chr17 73690197 73690208 E2F6 JASPAR yes 55968071
chr17 73690217 73690221 YY1 TRANSFAC yes 21296817
chr17 73690217 73690221 YY1 TRANSFAC yes 55968072
chr17 73690227 73690248 REST JASPAR yes 21296818
chr17 73690227 73690248 REST JASPAR yes 55968073
chr17 73690228 73690247 REST JASPAR yes 21296819
chr17 73690228 73690247 REST JASPAR yes 55968074
chr17 73690231 73690235 NFE TRANSFAC yes 21296820
chr17 73690231 73690235 NFE TRANSFAC yes 55968075
chr17 73690265 73690279 ZIC1 JASPAR yes 21296821
chr17 73690265 73690279 ZIC1 JASPAR yes 55968076
chr17 73690265 73690280 ZIC4 JASPAR yes 21296822
chr17 73690265 73690280 ZIC4 JASPAR yes 55968077
chr17 73690276 73690295 PAX5 JASPAR yes 21296823
chr17 73690276 73690295 PAX5 JASPAR yes 55968078
SNP sites on vista25990[chr17:73689850-73690283]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 73689918 rs820216 A G
NR3C1 POU2F2
5058712
chr17 73690075 rs117003263 G A
NR3C1
5058713
chr17 73690088 rs75767151 C G,T
NR3C1
5058714
Genes possibly regulated by vista25990[chr17:73689850-73690283]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 73622925 73663269 - RECQL5 ENSG00000108469.10 73663269 0.77 1.0 16254 73419
chr17 73629514 73637484 + SMIM5 ENSG00000204323.5 73629514 0.9 1.0 16255 39664
chr17 73642323 73644057 + SMIM6 ENSG00000259120.2 73642323 0.91 0.99 16256 52473
chr17 73663196 73704142 + SAP30BP ENSG00000161526.10 73663196 0.61 1.0 16257 73346
chr17 73717408 73753899 + ITGB4 ENSG00000132470.9 73717408 0.98 1.0 16258 72875
chr17 73747675 73761792 - GALK1 ENSG00000108479.7 73761792 0.8 1.0 16259 28491
chr17 73772515 73781974 - H3F3B ENSG00000132475.4 73781974 0.71 1.0 16260 8309
chr17 73780681 73821886 + UNK ENSG00000132478.5 73780681 0.66 1.0 16261 9602
Expression level of Genes
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miRNAs possibly regulated by vista25990[chr17:73689850-73690283]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results