EnhancerDB
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  3. vista26[chr1:1124600-1124942]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26[chr1:1124600-1124942]
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Tissue distribution of vista26
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Transcription factor that possibly regulate vista26[chr1:1124600-1124942]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1124604 1124610 PEA3 TRANSFAC yes 118214224
chr1 1124605 1124613 EHF JASPAR yes 118214225
chr1 1124620 1124631 STAT1 JASPAR yes 118214226
chr1 1124622 1124633 HOXC13 JASPAR yes 118214227
chr1 1124641 1124655 SPI1 JASPAR yes 118214228
chr1 1124646 1124654 EHF JASPAR yes 118214229
chr1 1124647 1124654 SPI1 JASPAR yes 118214230
chr1 1124648 1124658 NFKB1 JASPAR yes 118214231
chr1 1124648 1124658 REL JASPAR yes 118214232
chr1 1124660 1124678 NFYA JASPAR yes 118214233
chr1 1124663 1124679 NFYA JASPAR yes 118214234
chr1 1124665 1124675 EN2 JASPAR yes 118214235
chr1 1124665 1124675 ESX1 JASPAR yes 118214236
chr1 1124665 1124675 GBX1 JASPAR yes 118214237
chr1 1124665 1124675 GBX2 JASPAR yes 118214238
chr1 1124665 1124675 HESX1 JASPAR yes 118214239
chr1 1124665 1124675 HOXB3 JASPAR yes 118214240
chr1 1124665 1124675 LBX2 JASPAR yes 118214241
chr1 1124665 1124675 LHX2 JASPAR yes 118214242
chr1 1124665 1124675 RAX JASPAR yes 118214243
chr1 1124666 1124674 BARX1 JASPAR yes 118214244
chr1 1124666 1124674 BSX JASPAR yes 118214245
chr1 1124666 1124674 EN1 JASPAR yes 118214246
chr1 1124666 1124674 ISX JASPAR yes 118214247
chr1 1124666 1124674 LHX9 JASPAR yes 118214248
chr1 1124666 1124674 MSX1 JASPAR yes 118214249
chr1 1124666 1124674 MSX2 JASPAR yes 118214250
chr1 1124666 1124674 PRRX1 JASPAR yes 118214251
chr1 1124666 1124674 RAX2 JASPAR yes 118214252
chr1 1124666 1124674 SHOX JASPAR yes 118214253
chr1 1124666 1124675 VENTX JASPAR yes 118214254
chr1 1124666 1124681 NFYB JASPAR yes 118214255
chr1 1124667 1124677 PAX3 JASPAR yes 118214256
chr1 1124667 1124677 PAX7 JASPAR yes 118214257
chr1 1124669 1124679 HMBOX1 JASPAR yes 118214258
chr1 1124673 1124683 NKX2-3 JASPAR yes 118214259
chr1 1124674 1124682 ISL2 JASPAR yes 118214260
chr1 1124674 1124683 NKX3-2 JASPAR yes 118214261
chr1 1124683 1124689 TCF4 TRANSFAC yes 118214262
chr1 1124692 1124697 GATA2 JASPAR yes 118214263
chr1 1124702 1124715 ATF4 JASPAR yes 118214264
chr1 1124703 1124714 CEBPA JASPAR yes 118214265
chr1 1124704 1124715 CEBPB JASPAR yes 118214266
chr1 1124708 1124720 PKNOX1 JASPAR yes 118214267
chr1 1124708 1124720 TGIF1 JASPAR yes 118214268
chr1 1124708 1124720 TGIF2 JASPAR yes 118214269
chr1 1124713 1124721 MEIS2 JASPAR yes 118214270
chr1 1124714 1124718 NFE TRANSFAC yes 118214271
chr1 1124714 1124721 MEIS1 JASPAR yes 118214272
chr1 1124730 1124734 NFE TRANSFAC yes 118214273
chr1 1124756 1124760 YY1 TRANSFAC yes 118214274
chr1 1124792 1124805 DUXA JASPAR yes 118214275
chr1 1124793 1124804 DUX4 JASPAR yes 118214276
chr1 1124797 1124800 MYB TRANSFAC yes 118214277
chr1 1124839 1124843 YY1 TRANSFAC yes 118214278
chr1 1124843 1124857 POU1F1 JASPAR yes 118214279
chr1 1124844 1124856 POU3F1 JASPAR yes 118214280
chr1 1124844 1124856 POU3F2 JASPAR yes 118214281
chr1 1124844 1124857 POU3F3 JASPAR yes 118214282
chr1 1124845 1124856 FOXB1 JASPAR yes 118214283
chr1 1124845 1124857 POU2F1 JASPAR yes 118214284
chr1 1124846 1124855 POU5F1B JASPAR yes 118214285
chr1 1124859 1124874 RUNX2 JASPAR yes 118214286
chr1 1124876 1124888 POU2F1 JASPAR yes 118214287
chr1 1124876 1124889 POU3F3 JASPAR yes 118214288
chr1 1124876 1124890 POU1F1 JASPAR yes 118214289
chr1 1124877 1124889 POU3F1 JASPAR yes 118214290
chr1 1124877 1124889 POU3F2 JASPAR yes 118214291
chr1 1124878 1124882 YY1 TRANSFAC yes 118214292
chr1 1124880 1124890 HOXC10 JASPAR yes 118214293
chr1 1124880 1124890 HOXD13 JASPAR yes 118214294
chr1 1124880 1124891 HOXC13 JASPAR yes 118214295
chr1 1124881 1124891 GSX1 JASPAR yes 118214296
chr1 1124881 1124891 GSX2 JASPAR yes 118214297
chr1 1124882 1124890 NKX6-1 JASPAR yes 118214298
chr1 1124882 1124890 NKX6-2 JASPAR yes 118214299
chr1 1124882 1124892 POU6F2 JASPAR yes 118214300
chr1 1124908 1124912 TEAD2 TRANSFAC yes 118214301
SNP sites on vista26[chr1:1124600-1124942]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1124639 rs77836768 G A,C no 4224
chr1 1124663 rs6684820 G A
NFYA
4225
chr1 1124750 rs6702156 T C no 4226
chr1 1124785 rs79800260 G A,T no 4227
chr1 1124792 rs143677262 A T
DUXA
4228
chr1 1124819 rs6694487 C T no 4229
chr1 1124849 rs114307073 T G
FOXB1 POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 POU5F1B
4230
chr1 1124868 rs566597861 T C
RUNX2
4231
chr1 1124891 rs61768485 G A
GSX1 GSX2 HOXC13 POU6F2
4232
Genes possibly regulated by vista26[chr1:1124600-1124942]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1017198 1051741 - C1orf159 ENSG00000131591.13 1051741 0.65 1.0 15 27141
chr1 1109264 1133315 + TTLL10 ENSG00000162571.9 1109264 0.93 1.0 16 84664
chr1 1138888 1142071 - TNFRSF18 ENSG00000186891.9 1142071 0.88 1.0 17 82871
chr1 1146706 1149518 - TNFRSF4 ENSG00000186827.6 1149518 0.86 1.0 18 75424
chr1 1152288 1167411 - SDF4 ENSG00000078808.12 1167411 0.56 1.0 19 57531
chr1 1167629 1170421 + B3GALT6 ENSG00000176022.3 1167629 0.6 0.99 20 57313
chr1 1177826 1182102 - FAM132A ENSG00000184163.3 1182102 0.9 0.99 21 42840
chr1 1189289 1209265 - UBE2J2 ENSG00000160087.16 1209265 0.6 0.99 22 15677
chr1 1215816 1227409 + SCNN1D ENSG00000162572.15 1215816 0.8 1.0 23 9126
Expression level of Genes
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miRNAs possibly regulated by vista26[chr1:1124600-1124942]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results