EnhancerDB
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  3. vista26172[chr17:76247000-76247249]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26172[chr17:76247000-76247249]
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Tissue distribution of vista26172
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Transcription factor that possibly regulate vista26172[chr17:76247000-76247249]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 76246693 76247390 CTCF UCSC Txn Factor no Conserved 108301178
chr17 76246962 76247426 POLR2A UCSC Txn Factor no Conserved 108301209
chr17 76246985 76247401 MAX UCSC Txn Factor no Conserved 108301221
chr17 76247006 76247311 RAD21 UCSC Txn Factor no Conserved 108301243
chr17 76247021 76247321 ZNF143 UCSC Txn Factor no Conserved 108301259
chr17 76247034 76247307 SMC3 UCSC Txn Factor no Conserved 108301266
chr17 76247001 76247008 SPIB JASPAR yes 21306014
chr17 76247001 76247008 SPIB JASPAR yes 56136530
chr17 76247016 76247026 SMAD3 JASPAR yes 21306015
chr17 76247016 76247026 SMAD3 JASPAR yes 56136531
chr17 76247030 76247042 NHLH1 JASPAR yes 21306016
chr17 76247030 76247042 NHLH1 JASPAR yes 56136532
chr17 76247030 76247045 ZIC4 JASPAR yes 21306017
chr17 76247030 76247045 ZIC4 JASPAR yes 56136533
chr17 76247031 76247045 GLIS2 JASPAR yes 21306018
chr17 76247031 76247045 ZIC1 JASPAR yes 21306019
chr17 76247031 76247045 GLIS2 JASPAR yes 56136534
chr17 76247031 76247045 ZIC1 JASPAR yes 56136535
chr17 76247037 76247057 PPARG JASPAR yes 21306020
chr17 76247037 76247057 PPARG JASPAR yes 56136536
chr17 76247040 76247055 ESR2 JASPAR yes 21306021
chr17 76247040 76247055 ESR2 JASPAR yes 56136537
chr17 76247041 76247045 LFA1 TRANSFAC yes 21306022
chr17 76247041 76247045 LFA1 TRANSFAC yes 56136538
chr17 76247051 76247057 SP1 TRANSFAC yes 21306023
chr17 76247051 76247057 SP1 TRANSFAC yes 56136539
chr17 76247051 76247061 SP1 JASPAR yes 21306024
chr17 76247051 76247061 SP1 JASPAR yes 56136540
chr17 76247063 76247066 MYB TRANSFAC yes 21306025
chr17 76247063 76247066 MYB TRANSFAC yes 56136541
chr17 76247080 76247084 NFE TRANSFAC yes 21306026
chr17 76247080 76247084 NFE TRANSFAC yes 56136542
chr17 76247080 76247093 SMAD2 JASPAR yes 21306027
chr17 76247080 76247093 SMAD2 JASPAR yes 56136543
chr17 76247100 76247111 E2F4 JASPAR yes 21306028
chr17 76247100 76247111 E2F6 JASPAR yes 21306029
chr17 76247100 76247111 E2F4 JASPAR yes 56136544
chr17 76247100 76247111 E2F6 JASPAR yes 56136545
chr17 76247104 76247115 NFKB1 JASPAR yes 21306030
chr17 76247104 76247115 NFKB1 JASPAR yes 56136546
chr17 76247118 76247137 CTCF JASPAR yes 21306031
chr17 76247118 76247137 CTCF JASPAR yes 56136547
chr17 76247125 76247145 PPARG JASPAR yes 21306032
chr17 76247125 76247145 PPARG JASPAR yes 56136548
chr17 76247129 76247133 LFA1 TRANSFAC yes 21306033
chr17 76247129 76247133 LFA1 TRANSFAC yes 56136549
chr17 76247148 76247153 SP1 TRANSFAC yes 21306034
chr17 76247148 76247153 SP1 TRANSFAC yes 56136550
chr17 76247151 76247161 ID4 JASPAR yes 21306035
chr17 76247151 76247161 ID4 JASPAR yes 56136551
chr17 76247167 76247182 TFAP2A JASPAR yes 21306036
chr17 76247167 76247182 TFAP2A JASPAR yes 56136552
chr17 76247169 76247184 TFAP2A JASPAR yes 21306037
chr17 76247169 76247184 TFAP2C JASPAR yes 21306038
chr17 76247169 76247184 TFAP2A JASPAR yes 56136553
chr17 76247169 76247184 TFAP2C JASPAR yes 56136554
chr17 76247170 76247181 TFAP2A JASPAR yes 21306039
chr17 76247170 76247181 TFAP2B JASPAR yes 21306040
chr17 76247170 76247181 TFAP2C JASPAR yes 21306041
chr17 76247170 76247181 TFAP2A JASPAR yes 56136555
chr17 76247170 76247181 TFAP2B JASPAR yes 56136556
chr17 76247170 76247181 TFAP2C JASPAR yes 56136557
chr17 76247170 76247182 INSM1 JASPAR yes 21306042
chr17 76247170 76247182 INSM1 JASPAR yes 56136558
chr17 76247171 76247180 TFAP2A JASPAR yes 21306043
chr17 76247171 76247180 TFAP2A JASPAR yes 56136559
chr17 76247175 76247180 SP1 TRANSFAC yes 21306044
chr17 76247175 76247180 SP1 TRANSFAC yes 56136560
chr17 76247191 76247202 E2F1 JASPAR yes 21306045
chr17 76247191 76247202 E2F1 JASPAR yes 56136561
chr17 76247193 76247212 CTCF JASPAR yes 21306046
chr17 76247193 76247212 CTCF JASPAR yes 56136562
chr17 76247195 76247200 SP1 TRANSFAC yes 21306047
chr17 76247195 76247200 SP1 TRANSFAC yes 56136563
chr17 76247195 76247201 SP1 TRANSFAC yes 21306048
chr17 76247195 76247201 SP1 TRANSFAC yes 56136564
chr17 76247195 76247202 SP1 TRANSFAC yes 21306049
chr17 76247195 76247202 SP1 TRANSFAC yes 56136565
chr17 76247199 76247211 HES5 JASPAR yes 21306050
chr17 76247199 76247211 HES5 JASPAR yes 56136566
chr17 76247200 76247210 HEY1 JASPAR yes 21306051
chr17 76247200 76247210 HEY2 JASPAR yes 21306052
chr17 76247200 76247210 MAX JASPAR yes 21306053
chr17 76247200 76247210 MNT JASPAR yes 21306054
chr17 76247200 76247210 HEY1 JASPAR yes 56136567
chr17 76247200 76247210 HEY2 JASPAR yes 56136568
chr17 76247200 76247210 MAX JASPAR yes 56136569
chr17 76247200 76247210 MNT JASPAR yes 56136570
chr17 76247200 76247211 USF1 JASPAR yes 21306055
chr17 76247200 76247211 USF1 JASPAR yes 56136571
chr17 76247201 76247208 USF1 JASPAR yes 21306056
chr17 76247201 76247208 USF1 JASPAR yes 56136572
chr17 76247201 76247211 MAX JASPAR yes 21306057
chr17 76247201 76247211 MAX JASPAR yes 56136573
chr17 76247202 76247207 MYC TRANSFAC yes 21306058
chr17 76247202 76247207 USF1 TRANSFAC yes 21306059
chr17 76247202 76247207 USF2 TRANSFAC yes 21306060
chr17 76247202 76247207 MYC TRANSFAC yes 56136574
chr17 76247202 76247207 USF1 TRANSFAC yes 56136575
chr17 76247202 76247207 USF2 TRANSFAC yes 56136576
chr17 76247202 76247209 USF1 JASPAR yes 21306061
chr17 76247202 76247209 USF1 JASPAR yes 56136577
chr17 76247224 76247245 ZNF263 JASPAR yes 21306062
chr17 76247224 76247245 ZNF263 JASPAR yes 56136578
chr17 76247229 76247237 EHF JASPAR yes 21306063
chr17 76247229 76247237 EHF JASPAR yes 56136579
chr17 76247231 76247236 ETS2 TRANSFAC yes 21306064
chr17 76247231 76247236 ETS2 TRANSFAC yes 56136580
chr17 76247233 76247241 EHF JASPAR yes 21306065
chr17 76247233 76247241 EHF JASPAR yes 56136581
chr17 76247240 76247251 EBF1 JASPAR yes 21306066
chr17 76247240 76247251 EBF1 JASPAR yes 56136582
SNP sites on vista26172[chr17:76247000-76247249]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 76247012 rs559303459 C G
CTCF MAX POLR2A RAD21
5084020
chr17 76247158 rs880695 T C
CTCF ID4 MAX POLR2A RAD21 SMC3 ZNF143
5084021
chr17 76247205 rs880696 C A,T
CTCF HES5 HEY1 HEY2 MAX MNT MYC POLR2A RAD21 SMC3 USF1 USF2 ZNF143
5084022
Genes possibly regulated by vista26172[chr17:76247000-76247249]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 76164639 76169608 + SYNGR2 ENSG00000108639.3 76164639 0.86 1.0 16304 17639
chr17 76170160 76183314 - TK1 ENSG00000167900.7 76183314 0.92 1.0 16305 36314
chr17 76183398 76203782 + AFMID ENSG00000183077.11 76183398 0.86 0.99 16306 36398
chr17 76210267 76221717 + BIRC5 ENSG00000089685.10 76210267 0.96 0.99 16307 63267
chr17 76210462 76220740 - AC087645.1 ENSG00000268310.1 76220740 0.98 1.0 16308 73740
chr17 76227391 76237068 + TMEM235 ENSG00000204278.8 76227391 0.99 1.0 16309 80391
Expression level of Genes
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miRNAs possibly regulated by vista26172[chr17:76247000-76247249]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results