EnhancerDB
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  3. vista26298[chr17:77952311-77952542]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26298[chr17:77952311-77952542]
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Tissue distribution of vista26298
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Transcription factor that possibly regulate vista26298[chr17:77952311-77952542]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 77952299 77952316 NR3C1 JASPAR yes 21313002
chr17 77952299 77952316 NR3C2 JASPAR yes 21313003
chr17 77952299 77952316 NR3C1 JASPAR yes 56233461
chr17 77952299 77952316 NR3C2 JASPAR yes 56233462
chr17 77952299 77952317 NR3C1 JASPAR yes 21313004
chr17 77952299 77952317 NR3C1 JASPAR yes 56233463
chr17 77952325 77952346 IRF1 JASPAR yes 21313005
chr17 77952325 77952346 IRF1 JASPAR yes 56233464
chr17 77952327 77952342 STAT2 JASPAR yes 21313006
chr17 77952327 77952342 STAT2 JASPAR yes 56233465
chr17 77952329 77952343 IRF8 JASPAR yes 21313007
chr17 77952329 77952343 IRF8 JASPAR yes 56233466
chr17 77952329 77952344 IRF9 JASPAR yes 21313008
chr17 77952329 77952344 IRF9 JASPAR yes 56233467
chr17 77952331 77952352 IRF1 JASPAR yes 21313009
chr17 77952331 77952352 IRF1 JASPAR yes 56233468
chr17 77952333 77952348 STAT2 JASPAR yes 21313010
chr17 77952333 77952348 STAT2 JASPAR yes 56233469
chr17 77952348 77952359 FOS JASPAR yes 21313011
chr17 77952348 77952359 FOS JASPAR yes 56233470
chr17 77952350 77952361 BATF JASPAR yes 21313012
chr17 77952350 77952361 BATF JASPAR yes 56233471
chr17 77952358 77952368 SREBF2 JASPAR yes 21313013
chr17 77952358 77952368 SREBF2 JASPAR yes 56233472
chr17 77952362 77952373 ESRRA JASPAR yes 21313014
chr17 77952362 77952373 ESRRB JASPAR yes 21313015
chr17 77952362 77952373 ESRRA JASPAR yes 56233473
chr17 77952362 77952373 ESRRB JASPAR yes 56233474
chr17 77952363 77952371 NR4A2 JASPAR yes 21313016
chr17 77952363 77952371 NR4A2 JASPAR yes 56233475
chr17 77952364 77952374 RORA JASPAR yes 21313017
chr17 77952364 77952374 RORA JASPAR yes 56233476
chr17 77952370 77952381 FOXH1 JASPAR yes 21313018
chr17 77952370 77952381 FOXH1 JASPAR yes 56233477
chr17 77952371 77952377 ZNF354C JASPAR yes 21313019
chr17 77952371 77952377 ZNF354C JASPAR yes 56233478
chr17 77952371 77952381 RELA JASPAR yes 21313020
chr17 77952371 77952381 REL JASPAR yes 21313021
chr17 77952371 77952381 RELA JASPAR yes 56233479
chr17 77952371 77952381 REL JASPAR yes 56233480
chr17 77952372 77952382 RELA JASPAR yes 21313022
chr17 77952372 77952382 RELA JASPAR yes 56233481
chr17 77952372 77952383 NFKB1 JASPAR yes 21313023
chr17 77952372 77952383 NFKB1 JASPAR yes 56233482
chr17 77952374 77952379 H4TF1 TRANSFAC yes 21313024
chr17 77952374 77952379 H4TF1 TRANSFAC yes 56233483
chr17 77952395 77952405 TEAD4 JASPAR yes 21313025
chr17 77952395 77952405 TEAD4 JASPAR yes 56233484
chr17 77952415 77952427 PKNOX1 JASPAR yes 21313026
chr17 77952415 77952427 PKNOX2 JASPAR yes 21313027
chr17 77952415 77952427 TGIF1 JASPAR yes 21313028
chr17 77952415 77952427 TGIF2 JASPAR yes 21313029
chr17 77952415 77952427 PKNOX1 JASPAR yes 56233485
chr17 77952415 77952427 PKNOX2 JASPAR yes 56233486
chr17 77952415 77952427 TGIF1 JASPAR yes 56233487
chr17 77952415 77952427 TGIF2 JASPAR yes 56233488
chr17 77952416 77952426 FIGLA JASPAR yes 21313030
chr17 77952416 77952426 MSC JASPAR yes 21313031
chr17 77952416 77952426 MYF6 JASPAR yes 21313032
chr17 77952416 77952426 NHLH1 JASPAR yes 21313033
chr17 77952416 77952426 TFAP4 JASPAR yes 21313034
chr17 77952416 77952426 FIGLA JASPAR yes 56233489
chr17 77952416 77952426 MSC JASPAR yes 56233490
chr17 77952416 77952426 MYF6 JASPAR yes 56233491
chr17 77952416 77952426 NHLH1 JASPAR yes 56233492
chr17 77952416 77952426 TFAP4 JASPAR yes 56233493
chr17 77952439 77952445 ETS1 JASPAR yes 21313035
chr17 77952439 77952445 SPI1 JASPAR yes 21313036
chr17 77952439 77952445 ETS1 JASPAR yes 56233494
chr17 77952439 77952445 SPI1 JASPAR yes 56233495
chr17 77952447 77952451 H4TF2 TRANSFAC yes 21313037
chr17 77952447 77952451 H4TF2 TRANSFAC yes 56233496
chr17 77952456 77952460 YY1 TRANSFAC yes 21313038
chr17 77952456 77952460 YY1 TRANSFAC yes 56233497
chr17 77952456 77952466 HOXC10 JASPAR yes 21313039
chr17 77952456 77952466 HOXD11 JASPAR yes 21313040
chr17 77952456 77952466 HOXC10 JASPAR yes 56233498
chr17 77952456 77952466 HOXD11 JASPAR yes 56233499
chr17 77952456 77952467 HOXC11 JASPAR yes 21313041
chr17 77952456 77952467 HOXC12 JASPAR yes 21313042
chr17 77952456 77952467 HOXD12 JASPAR yes 21313043
chr17 77952456 77952467 HOXC11 JASPAR yes 56233500
chr17 77952456 77952467 HOXC12 JASPAR yes 56233501
chr17 77952456 77952467 HOXD12 JASPAR yes 56233502
chr17 77952489 77952499 BHLHE40 JASPAR yes 21313044
chr17 77952489 77952499 BHLHE41 JASPAR yes 21313045
chr17 77952489 77952499 MLXIPL JASPAR yes 21313046
chr17 77952489 77952499 MLX JASPAR yes 21313047
chr17 77952489 77952499 MNT JASPAR yes 21313048
chr17 77952489 77952499 TFE3 JASPAR yes 21313049
chr17 77952489 77952499 BHLHE40 JASPAR yes 56233503
chr17 77952489 77952499 BHLHE41 JASPAR yes 56233504
chr17 77952489 77952499 MLXIPL JASPAR yes 56233505
chr17 77952489 77952499 MLX JASPAR yes 56233506
chr17 77952489 77952499 MNT JASPAR yes 56233507
chr17 77952489 77952499 TFE3 JASPAR yes 56233508
chr17 77952491 77952496 MYC TRANSFAC yes 21313050
chr17 77952491 77952496 USF1 TRANSFAC yes 21313051
chr17 77952491 77952496 USF2 TRANSFAC yes 21313052
chr17 77952491 77952496 MYC TRANSFAC yes 56233509
chr17 77952491 77952496 USF1 TRANSFAC yes 56233510
chr17 77952491 77952496 USF2 TRANSFAC yes 56233511
chr17 77952511 77952521 NFATC3 JASPAR yes 21313053
chr17 77952511 77952521 NFATC3 JASPAR yes 56233512
chr17 77952512 77952519 NFATC2 JASPAR yes 21313054
chr17 77952512 77952519 NFATC2 JASPAR yes 56233513
chr17 77952537 77952552 HNF1A JASPAR yes 21313055
chr17 77952537 77952552 HNF1A JASPAR yes 56233514
chr17 77952538 77952550 HNF1B JASPAR yes 21313056
chr17 77952538 77952550 HNF1B JASPAR yes 56233515
chr17 77952538 77952551 HNF1B JASPAR yes 21313057
chr17 77952538 77952551 HNF1B JASPAR yes 56233516
chr17 77952541 77952558 ZNF410 JASPAR yes 21313058
chr17 77952541 77952558 ZNF410 JASPAR yes 56233517
SNP sites on vista26298[chr17:77952311-77952542]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 77952328 rs374079574 G A
IRF1 STAT2
5098861
chr17 77952329 rs367701496 C A
IRF1 IRF8 IRF9 STAT2
5098862
chr17 77952489 rs58333383 G A
BHLHE40 BHLHE41 MLX MLXIPL MNT TFE3
5098863
chr17 77952490 rs191549150 T C
BHLHE40 BHLHE41 MLX MLXIPL MNT TFE3
5098864
chr17 77952494 rs184027951 C A,G,T
BHLHE40 BHLHE41 MLX MLXIPL MNT MYC TFE3 USF1 USF2
5098865
Genes possibly regulated by vista26298[chr17:77952311-77952542]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 77906142 78009647 - TBC1D16 ENSG00000167291.11 78009647 0.77 1.0 16329 42895
chr17 78010435 78074412 + CCDC40 ENSG00000141519.10 78010435 0.87 1.0 16330 42107
Expression level of Genes
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miRNAs possibly regulated by vista26298[chr17:77952311-77952542]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results