EnhancerDB
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  3. vista26304[chr17:77979653-77979899]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26304[chr17:77979653-77979899]
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Tissue distribution of vista26304
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Transcription factor that possibly regulate vista26304[chr17:77979653-77979899]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 77979578 77980000 CTCF UCSC Txn Factor no Conserved 108305864
chr17 77979655 77979925 RAD21 UCSC Txn Factor no Conserved 108305880
chr17 77979660 77979669 NFIX JASPAR yes 21313450
chr17 77979660 77979669 NFIX JASPAR yes 56237558
chr17 77979660 77979670 NFIA JASPAR yes 21313451
chr17 77979660 77979670 NFIA JASPAR yes 56237559
chr17 77979662 77979668 NFIC JASPAR yes 21313452
chr17 77979662 77979668 NFIC JASPAR yes 56237560
chr17 77979666 77979678 POU3F1 JASPAR yes 21313453
chr17 77979666 77979678 POU3F1 JASPAR yes 56237561
chr17 77979666 77979679 POU3F3 JASPAR yes 21313454
chr17 77979666 77979679 POU3F3 JASPAR yes 56237562
chr17 77979669 77979672 MYB TRANSFAC yes 21313455
chr17 77979669 77979672 MYB TRANSFAC yes 56237563
chr17 77979685 77979699 NR2F1 JASPAR yes 21313456
chr17 77979685 77979699 NR2F1 JASPAR yes 56237564
chr17 77979686 77979700 PLAG1 JASPAR yes 21313457
chr17 77979686 77979700 PLAG1 JASPAR yes 56237565
chr17 77979693 77979708 TFAP2A JASPAR yes 21313458
chr17 77979693 77979708 TFAP2A JASPAR yes 56237566
chr17 77979694 77979703 TFAP2A JASPAR yes 21313459
chr17 77979694 77979703 TFAP2A JASPAR yes 56237567
chr17 77979699 77979719 RREB1 JASPAR yes 21313460
chr17 77979699 77979719 RREB1 JASPAR yes 56237568
chr17 77979700 77979710 SP1 JASPAR yes 21313461
chr17 77979700 77979710 SP1 JASPAR yes 56237569
chr17 77979702 77979707 SP1 TRANSFAC yes 21313462
chr17 77979702 77979707 SP1 TRANSFAC yes 56237570
chr17 77979707 77979712 SP1 TRANSFAC yes 21313463
chr17 77979707 77979712 SP1 TRANSFAC yes 56237571
chr17 77979708 77979718 ZNF740 JASPAR yes 21313464
chr17 77979708 77979718 ZNF740 JASPAR yes 56237572
chr17 77979708 77979728 PPARG JASPAR yes 21313465
chr17 77979708 77979728 PPARG JASPAR yes 56237573
chr17 77979730 77979734 H1TF2 TRANSFAC yes 21313466
chr17 77979730 77979734 NFE TRANSFAC yes 21313467
chr17 77979730 77979734 SRF TRANSFAC yes 21313468
chr17 77979730 77979734 H1TF2 TRANSFAC yes 56237574
chr17 77979730 77979734 NFE TRANSFAC yes 56237575
chr17 77979730 77979734 SRF TRANSFAC yes 56237576
chr17 77979755 77979770 AR JASPAR yes 21313469
chr17 77979755 77979770 AR JASPAR yes 56237577
chr17 77979773 77979779 ZNF354C JASPAR yes 21313470
chr17 77979773 77979779 ZNF354C JASPAR yes 56237578
chr17 77979775 77979794 CTCF JASPAR yes 21313471
chr17 77979775 77979794 CTCF JASPAR yes 56237579
chr17 77979814 77979827 TFAP2A JASPAR yes 21313472
chr17 77979814 77979827 TFAP2B JASPAR yes 21313473
chr17 77979814 77979827 TFAP2C JASPAR yes 21313474
chr17 77979814 77979827 TFAP2A JASPAR yes 56237580
chr17 77979814 77979827 TFAP2B JASPAR yes 56237581
chr17 77979814 77979827 TFAP2C JASPAR yes 56237582
chr17 77979837 77979853 POU4F2 JASPAR yes 21313475
chr17 77979837 77979853 POU4F3 JASPAR yes 21313476
chr17 77979837 77979853 POU4F2 JASPAR yes 56237583
chr17 77979837 77979853 POU4F3 JASPAR yes 56237584
chr17 77979839 77979853 POU4F1 JASPAR yes 21313477
chr17 77979839 77979853 POU4F1 JASPAR yes 56237585
chr17 77979839 77979854 HNF1A JASPAR yes 21313478
chr17 77979839 77979854 HNF1A JASPAR yes 56237586
chr17 77979840 77979850 ESX1 JASPAR yes 21313479
chr17 77979840 77979850 GSX2 JASPAR yes 21313480
chr17 77979840 77979850 HOXB2 JASPAR yes 21313481
chr17 77979840 77979850 HOXB3 JASPAR yes 21313482
chr17 77979840 77979850 LHX6 JASPAR yes 21313483
chr17 77979840 77979850 MEOX2 JASPAR yes 21313484
chr17 77979840 77979850 MNX1 JASPAR yes 21313485
chr17 77979840 77979850 POU6F1 JASPAR yes 21313486
chr17 77979840 77979850 RAX JASPAR yes 21313487
chr17 77979840 77979850 ESX1 JASPAR yes 56237587
chr17 77979840 77979850 GSX2 JASPAR yes 56237588
chr17 77979840 77979850 HOXB2 JASPAR yes 56237589
chr17 77979840 77979850 HOXB3 JASPAR yes 56237590
chr17 77979840 77979850 LHX6 JASPAR yes 56237591
chr17 77979840 77979850 MEOX2 JASPAR yes 56237592
chr17 77979840 77979850 MNX1 JASPAR yes 56237593
chr17 77979840 77979850 POU6F1 JASPAR yes 56237594
chr17 77979840 77979850 RAX JASPAR yes 56237595
chr17 77979840 77979852 HNF1B JASPAR yes 21313488
chr17 77979840 77979852 HNF1B JASPAR yes 56237596
chr17 77979840 77979853 HNF1B JASPAR yes 21313489
chr17 77979840 77979853 HNF1B JASPAR yes 56237597
chr17 77979840 77979854 POU4F1 JASPAR yes 21313490
chr17 77979840 77979854 POU4F1 JASPAR yes 56237598
chr17 77979840 77979856 POU4F2 JASPAR yes 21313491
chr17 77979840 77979856 POU4F3 JASPAR yes 21313492
chr17 77979840 77979856 POU4F2 JASPAR yes 56237599
chr17 77979840 77979856 POU4F3 JASPAR yes 56237600
chr17 77979841 77979849 LMX1A JASPAR yes 21313493
chr17 77979841 77979849 LMX1B JASPAR yes 21313494
chr17 77979841 77979849 NKX6-1 JASPAR yes 21313495
chr17 77979841 77979849 NKX6-2 JASPAR yes 21313496
chr17 77979841 77979849 VAX1 JASPAR yes 21313497
chr17 77979841 77979849 VAX2 JASPAR yes 21313498
chr17 77979841 77979849 VSX1 JASPAR yes 21313499
chr17 77979841 77979849 VSX2 JASPAR yes 21313500
chr17 77979841 77979849 LMX1A JASPAR yes 56237601
chr17 77979841 77979849 LMX1B JASPAR yes 56237602
chr17 77979841 77979849 NKX6-1 JASPAR yes 56237603
chr17 77979841 77979849 NKX6-2 JASPAR yes 56237604
chr17 77979841 77979849 VAX1 JASPAR yes 56237605
chr17 77979841 77979849 VAX2 JASPAR yes 56237606
chr17 77979841 77979849 VSX1 JASPAR yes 56237607
chr17 77979841 77979849 VSX2 JASPAR yes 56237608
chr17 77979841 77979853 HNF1B JASPAR yes 21313501
chr17 77979841 77979853 HNF1B JASPAR yes 56237609
chr17 77979844 77979856 MEF2A JASPAR yes 21313502
chr17 77979844 77979856 MEF2B JASPAR yes 21313503
chr17 77979844 77979856 MEF2D JASPAR yes 21313504
chr17 77979844 77979856 MEF2A JASPAR yes 56237610
chr17 77979844 77979856 MEF2B JASPAR yes 56237611
chr17 77979844 77979856 MEF2D JASPAR yes 56237612
chr17 77979845 77979855 MEF2A JASPAR yes 21313505
chr17 77979845 77979855 MEF2A JASPAR yes 56237613
chr17 77979854 77979869 ZIC3 JASPAR yes 21313506
chr17 77979854 77979869 ZIC4 JASPAR yes 21313507
chr17 77979854 77979869 ZIC3 JASPAR yes 56237614
chr17 77979854 77979869 ZIC4 JASPAR yes 56237615
chr17 77979855 77979860 SP1 TRANSFAC yes 21313508
chr17 77979855 77979860 SP1 TRANSFAC yes 56237616
SNP sites on vista26304[chr17:77979653-77979899]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 77979737 rs577306130 T C,G
CTCF RAD21
5099222
chr17 77979748 rs8081656 C T
CTCF RAD21
5099223
chr17 77979758 rs9898761 A G
AR CTCF RAD21
5099224
chr17 77979797 rs4889811 G A
CTCF RAD21
5099225
chr17 77979822 rs546610884 C T
CTCF RAD21 TFAP2A TFAP2B TFAP2C
5099226
chr17 77979877 rs561546561 C T
CTCF RAD21
5099227
Genes possibly regulated by vista26304[chr17:77979653-77979899]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 77906142 78009647 - TBC1D16 ENSG00000167291.11 78009647 0.77 1.0 16329 70252
chr17 78010435 78074412 + CCDC40 ENSG00000141519.10 78010435 0.87 1.0 16330 69464
chr17 78075355 78093678 + GAA ENSG00000171298.8 78075355 0.63 1.0 16331 4544
Expression level of Genes
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miRNAs possibly regulated by vista26304[chr17:77979653-77979899]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results