EnhancerDB
  1. Home
  2. Enhancers
  3. vista26308[chr17:78087852-78088239]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26308[chr17:78087852-78088239]
Back to top
Tissue distribution of vista26308
Back to top
Transcription factor that possibly regulate vista26308[chr17:78087852-78088239]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 78087859 78087864 GATA1 TRANSFAC yes 21313585
chr17 78087860 78087874 EBF1 JASPAR yes 21313586
chr17 78087862 78087873 EBF1 JASPAR yes 21313587
chr17 78087866 78087871 TFAP2A TRANSFAC yes 21313588
chr17 78087866 78087872 MZF1 JASPAR yes 21313589
chr17 78087879 78087883 YY1 TRANSFAC yes 21313590
chr17 78087882 78087897 FOXP1 JASPAR yes 21313591
chr17 78087882 78087903 IRF1 JASPAR yes 21313592
chr17 78087884 78087899 FOXP1 JASPAR yes 21313593
chr17 78087884 78087905 IRF1 JASPAR yes 21313594
chr17 78087885 78087900 FOXP1 JASPAR yes 21313595
chr17 78087886 78087901 FOXP1 JASPAR yes 21313596
chr17 78087887 78087902 FOXP1 JASPAR yes 21313597
chr17 78087888 78087903 FOXP1 JASPAR yes 21313598
chr17 78087889 78087904 FOXP1 JASPAR yes 21313599
chr17 78087889 78087910 IRF1 JASPAR yes 21313600
chr17 78087890 78087905 FOXP1 JASPAR yes 21313601
chr17 78087891 78087906 FOXP1 JASPAR yes 21313602
chr17 78087899 78087913 SPI1 JASPAR yes 21313603
chr17 78087913 78087917 YY1 TRANSFAC yes 21313604
chr17 78087934 78087946 POU2F1 JASPAR yes 21313605
chr17 78087934 78087947 POU3F3 JASPAR yes 21313606
chr17 78087935 78087947 POU3F1 JASPAR yes 21313607
chr17 78087935 78087947 POU3F2 JASPAR yes 21313608
chr17 78087935 78087948 POU2F2 JASPAR yes 21313609
chr17 78087936 78087945 POU3F4 JASPAR yes 21313610
chr17 78087936 78087945 POU5F1B JASPAR yes 21313611
chr17 78087948 78087963 FOXP1 JASPAR yes 21313612
chr17 78087949 78087960 FOXA1 JASPAR yes 21313613
chr17 78087949 78087964 FOXA1 JASPAR yes 21313614
chr17 78087950 78087961 FOXB1 JASPAR yes 21313615
chr17 78087950 78087961 FOXC1 JASPAR yes 21313616
chr17 78087950 78087962 FOXC2 JASPAR yes 21313617
chr17 78087951 78087962 FOXP2 JASPAR yes 21313618
chr17 78087951 78087963 FOXI1 JASPAR yes 21313619
chr17 78087952 78087956 TEAD2 TRANSFAC yes 21313620
chr17 78087952 78087957 TBP TRANSFAC yes 21313621
chr17 78087953 78087961 FOXG1 JASPAR yes 21313622
chr17 78087955 78087961 HiNF-A TRANSFAC yes 21313623
chr17 78087993 78087996 MYB TRANSFAC yes 21313624
chr17 78088009 78088020 FOXB1 JASPAR yes 21313625
chr17 78088012 78088023 HOXA10 JASPAR yes 21313626
chr17 78088013 78088023 HOXB13 JASPAR yes 21313627
chr17 78088013 78088023 HOXD13 JASPAR yes 21313628
chr17 78088093 78088099 PEA3 TRANSFAC yes 21313629
chr17 78088109 78088123 SPIC JASPAR yes 21313630
chr17 78088130 78088135 GATA2 JASPAR yes 21313631
chr17 78088131 78088137 ZNF354C JASPAR yes 21313632
chr17 78088136 78088146 TEAD1 JASPAR yes 21313633
chr17 78088136 78088146 TEAD4 JASPAR yes 21313634
chr17 78088136 78088148 TEAD1 JASPAR yes 21313635
chr17 78088145 78088155 ELK1 JASPAR yes 21313636
chr17 78088145 78088157 EHF JASPAR yes 21313637
chr17 78088145 78088157 ELF1 JASPAR yes 21313638
chr17 78088145 78088157 ELF4 JASPAR yes 21313639
chr17 78088145 78088158 ELF3 JASPAR yes 21313640
chr17 78088146 78088157 ELF5 JASPAR yes 21313641
chr17 78088146 78088157 ETV2 JASPAR yes 21313642
chr17 78088146 78088157 SPDEF JASPAR yes 21313643
chr17 78088147 78088156 ELK4 JASPAR yes 21313644
chr17 78088147 78088158 ELK4 JASPAR yes 21313645
chr17 78088148 78088156 FEV JASPAR yes 21313646
chr17 78088149 78088155 ETS1 JASPAR yes 21313647
chr17 78088150 78088160 RELA JASPAR yes 21313648
chr17 78088167 78088175 HOXA5 JASPAR yes 21313649
chr17 78088175 78088185 HOXD13 JASPAR yes 21313650
chr17 78088175 78088186 HOXA10 JASPAR yes 21313651
chr17 78088176 78088186 EMX1 JASPAR yes 21313652
chr17 78088176 78088186 GBX2 JASPAR yes 21313653
chr17 78088176 78088186 GSX1 JASPAR yes 21313654
chr17 78088176 78088186 GSX2 JASPAR yes 21313655
chr17 78088176 78088186 HOXB2 JASPAR yes 21313656
chr17 78088176 78088186 HOXB3 JASPAR yes 21313657
chr17 78088176 78088186 MEOX1 JASPAR yes 21313658
chr17 78088176 78088186 MEOX2 JASPAR yes 21313659
chr17 78088176 78088186 MIXL1 JASPAR yes 21313660
chr17 78088176 78088186 MNX1 JASPAR yes 21313661
chr17 78088177 78088185 LMX1A JASPAR yes 21313662
chr17 78088177 78088185 LMX1B JASPAR yes 21313663
chr17 78088177 78088185 NKX6-1 JASPAR yes 21313664
chr17 78088177 78088185 NKX6-2 JASPAR yes 21313665
chr17 78088177 78088185 PDX1 JASPAR yes 21313666
chr17 78088177 78088185 VAX1 JASPAR yes 21313667
chr17 78088177 78088185 VAX2 JASPAR yes 21313668
chr17 78088177 78088185 VSX1 JASPAR yes 21313669
chr17 78088182 78088197 MEF2C JASPAR yes 21313670
chr17 78088183 78088197 POU1F1 JASPAR yes 21313671
chr17 78088185 78088189 YY1 TRANSFAC yes 21313672
chr17 78088187 78088197 HOXC10 JASPAR yes 21313673
chr17 78088187 78088197 HOXD11 JASPAR yes 21313674
chr17 78088187 78088198 HOXA10 JASPAR yes 21313675
chr17 78088187 78088198 HOXC11 JASPAR yes 21313676
chr17 78088187 78088198 HOXC12 JASPAR yes 21313677
chr17 78088187 78088198 HOXD12 JASPAR yes 21313678
chr17 78088188 78088198 MEOX2 JASPAR yes 21313679
chr17 78088188 78088198 MNX1 JASPAR yes 21313680
chr17 78088189 78088197 NKX6-1 JASPAR yes 21313681
chr17 78088189 78088199 POU6F2 JASPAR yes 21313682
chr17 78088191 78088202 ESRRA JASPAR yes 21313683
chr17 78088191 78088202 ESRRB JASPAR yes 21313684
chr17 78088193 78088203 RORA JASPAR yes 21313685
chr17 78088207 78088211 NFE TRANSFAC yes 21313686
chr17 78088209 78088225 SOX8 JASPAR yes 21313687
chr17 78088213 78088234 IRF1 JASPAR yes 21313688
chr17 78088215 78088230 PRDM1 JASPAR yes 21313689
chr17 78088215 78088230 STAT2 JASPAR yes 21313690
chr17 78088216 78088237 IRF1 JASPAR yes 21313691
chr17 78088217 78088238 IRF1 JASPAR yes 21313692
chr17 78088218 78088233 FOXP1 JASPAR yes 21313693
chr17 78088219 78088234 FOXP1 JASPAR yes 21313694
chr17 78088220 78088235 FOXP1 JASPAR yes 21313695
chr17 78088221 78088236 FOXP1 JASPAR yes 21313696
chr17 78088222 78088237 FOXP1 JASPAR yes 21313697
chr17 78088223 78088238 FOXP1 JASPAR yes 21313698
chr17 78088224 78088239 FOXP1 JASPAR yes 21313699
SNP sites on vista26308[chr17:78087852-78088239]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 78087865 rs113185865 T TCTGGGGAA
EBF1
5099945
chr17 78087888 rs4889819 G A
FOXP1 IRF1
5099946
chr17 78087894 rs74737410 A G
FOXP1 IRF1
5099947
chr17 78088024 rs4889964 A G no 5099948
chr17 78088049 rs4889965 G A no 5099949
chr17 78088078 rs149499029 G A no 5099950
chr17 78088219 rs11358043 CT C
FOXP1 IRF1 PRDM1 SOX8 STAT2
5099951
chr17 78088219 rs540307183 CT C
FOXP1 IRF1 PRDM1 SOX8 STAT2
5099952
chr17 78088225 rs547030437 T C
FOXP1 IRF1 PRDM1 SOX8 STAT2
5099953
Genes possibly regulated by vista26308[chr17:78087852-78088239]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 77906142 78009647 - TBC1D16 ENSG00000167291.11 78009647 0.77 1.0 16329 21795
chr17 78010435 78074412 + CCDC40 ENSG00000141519.10 78010435 0.87 1.0 16330 22583
chr17 78075355 78093678 + GAA ENSG00000171298.8 78075355 0.63 1.0 16331 87503
chr17 78109013 78120982 - EIF4A3 ENSG00000141543.5 78120982 0.65 1.0 16332 67257
chr17 78143791 78183130 + CARD14 ENSG00000141527.12 78143791 0.85 1.0 16333 44448
Expression level of Genes
Back to top
miRNAs possibly regulated by vista26308[chr17:78087852-78088239]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results