EnhancerDB
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  3. vista26311[chr17:78121490-78121818]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26311[chr17:78121490-78121818]
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Tissue distribution of vista26311
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Transcription factor that possibly regulate vista26311[chr17:78121490-78121818]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 78120224 78121728 POLR2A UCSC Txn Factor no Conserved 108305966
chr17 78120556 78121539 TAF1 UCSC Txn Factor no Conserved 108305987
chr17 78121057 78121629 PHF8 UCSC Txn Factor no Conserved 108306002
chr17 78121495 78121500 TFAP2A TRANSFAC yes 21313799
chr17 78121495 78121501 MZF1 JASPAR yes 21313800
chr17 78121497 78121503 MAZ TRANSFAC yes 21313801
chr17 78121557 78121562 MYC TRANSFAC yes 21313802
chr17 78121586 78121605 PAX5 JASPAR yes 21313803
chr17 78121620 78121635 HNF4G JASPAR yes 21313804
chr17 78121620 78121635 NR2C2 JASPAR yes 21313805
chr17 78121621 78121635 NR2F1 JASPAR yes 21313806
chr17 78121621 78121635 RXRB JASPAR yes 21313807
chr17 78121621 78121635 RXRG JASPAR yes 21313808
chr17 78121621 78121636 HNF4A JASPAR yes 21313809
chr17 78121642 78121650 SP1 TRANSFAC yes 21313810
chr17 78121686 78121696 SP1 JASPAR yes 21313811
chr17 78121686 78121705 PAX5 JASPAR yes 21313812
chr17 78121689 78121694 SP1 TRANSFAC yes 21313813
chr17 78121726 78121746 RREB1 JASPAR yes 21313814
chr17 78121731 78121741 SP1 JASPAR yes 21313815
chr17 78121731 78121752 ZNF263 JASPAR yes 21313816
chr17 78121734 78121744 SP1 JASPAR yes 21313817
chr17 78121736 78121741 SP1 TRANSFAC yes 21313818
chr17 78121737 78121742 SP1 TRANSFAC yes 21313819
chr17 78121737 78121743 SP1 TRANSFAC yes 21313820
chr17 78121775 78121780 SP1 TRANSFAC yes 21313821
chr17 78121780 78121790 SREBF2 JASPAR yes 21313822
chr17 78121780 78121791 USF1 JASPAR yes 21313823
chr17 78121780 78121791 USF2 JASPAR yes 21313824
chr17 78121798 78121805 E2F1 TRANSFAC yes 21313825
SNP sites on vista26311[chr17:78121490-78121818]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 78121567 rs190619771 C T
PHF8 POLR2A
5100219
chr17 78121620 rs148462793 G A
HNF4G NR2C2 PHF8 POLR2A
5100220
chr17 78121623 rs376896376 G T
HNF4A HNF4G NR2C2 NR2F1 PHF8 POLR2A RXRB RXRG
5100221
chr17 78121707 rs4889979 T A,G
POLR2A
5100222
chr17 78121727 rs144140975 G A
POLR2A RREB1
5100223
chr17 78121733 rs572903356 G C,T
RREB1 SP1 ZNF263
5100224
chr17 78121750 rs77030274 G A
ZNF263
5100225
chr17 78121777 rs117962605 G A
SP1
5100226
Genes possibly regulated by vista26311[chr17:78121490-78121818]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 78075355 78093678 + GAA ENSG00000171298.8 78075355 0.63 1.0 16331 53865
chr17 78109013 78120982 - EIF4A3 ENSG00000141543.5 78120982 0.65 1.0 16332 99492
chr17 78143791 78183130 + CARD14 ENSG00000141527.12 78143791 0.85 1.0 16333 78027
chr17 78180515 78194722 - SGSH ENSG00000181523.8 78194722 0.66 1.0 16334 27096
chr17 78193498 78227299 + SLC26A11 ENSG00000181045.10 78193498 0.72 1.0 16335 28320
Expression level of Genes
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miRNAs possibly regulated by vista26311[chr17:78121490-78121818]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results