EnhancerDB
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  3. vista26316[chr17:78198081-78198434]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26316[chr17:78198081-78198434]
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Tissue distribution of vista26316
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Transcription factor that possibly regulate vista26316[chr17:78198081-78198434]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 78198122 78198133 BATF JASPAR yes 21314138
chr17 78198124 78198139 PRDM1 JASPAR yes 21314139
chr17 78198130 78198150 RREB1 JASPAR yes 21314140
chr17 78198138 78198158 RREB1 JASPAR yes 21314141
chr17 78198144 78198164 RREB1 JASPAR yes 21314142
chr17 78198146 78198166 RREB1 JASPAR yes 21314143
chr17 78198149 78198163 PLAG1 JASPAR yes 21314144
chr17 78198150 78198161 TBX20 JASPAR yes 21314145
chr17 78198151 78198159 MGA JASPAR yes 21314146
chr17 78198151 78198159 TBX15 JASPAR yes 21314147
chr17 78198151 78198159 TBX1 JASPAR yes 21314148
chr17 78198151 78198159 TBX4 JASPAR yes 21314149
chr17 78198151 78198159 TBX5 JASPAR yes 21314150
chr17 78198170 78198181 NRF1 JASPAR yes 21314151
chr17 78198171 78198182 NRF1 JASPAR yes 21314152
chr17 78198172 78198183 NRF1 JASPAR yes 21314153
chr17 78198200 78198215 PRDM1 JASPAR yes 21314154
chr17 78198214 78198229 PRDM1 JASPAR yes 21314155
chr17 78198220 78198240 RREB1 JASPAR yes 21314156
chr17 78198226 78198246 RREB1 JASPAR yes 21314157
chr17 78198232 78198243 TBX20 JASPAR yes 21314158
chr17 78198232 78198243 TBX2 JASPAR yes 21314159
chr17 78198233 78198241 MGA JASPAR yes 21314160
chr17 78198233 78198241 TBX15 JASPAR yes 21314161
chr17 78198233 78198241 TBX1 JASPAR yes 21314162
chr17 78198233 78198241 TBX4 JASPAR yes 21314163
chr17 78198233 78198241 TBX5 JASPAR yes 21314164
chr17 78198286 78198301 SCRT1 JASPAR yes 21314165
chr17 78198288 78198301 SCRT2 JASPAR yes 21314166
chr17 78198322 78198326 LFA1 TRANSFAC yes 21314167
chr17 78198335 78198347 HNF1B JASPAR yes 21314168
chr17 78198354 78198369 ZIC3 JASPAR yes 21314169
chr17 78198354 78198369 ZIC4 JASPAR yes 21314170
chr17 78198355 78198369 GLIS3 JASPAR yes 21314171
chr17 78198355 78198369 ZIC1 JASPAR yes 21314172
chr17 78198376 78198380 YY1 TRANSFAC yes 21314173
chr17 78198378 78198390 POU3F1 JASPAR yes 21314174
chr17 78198378 78198390 POU3F2 JASPAR yes 21314175
chr17 78198379 78198383 YY1 TRANSFAC yes 21314176
chr17 78198379 78198389 NFATC3 JASPAR yes 21314177
chr17 78198385 78198389 YY1 TRANSFAC yes 21314178
chr17 78198394 78198401 CEBPA TRANSFAC yes 21314179
chr17 78198410 78198418 TBX5 JASPAR yes 21314180
SNP sites on vista26316[chr17:78198081-78198434]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 78198091 rs532823785 AGT A no 5100694
chr17 78198091 rs7405823 A C,T no 5100695
chr17 78198093 rs200236399 T TGA no 5100696
chr17 78198097 rs555123036 CGT C no 5100697
chr17 78198098 rs544413748 G A no 5100698
chr17 78198100 rs562816343 G A no 5100699
chr17 78198101 rs530116803 T C no 5100700
chr17 78198107 rs71368062 T A no 5100701
chr17 78198113 rs143696859 A AGT no 5100702
chr17 78198113 rs71368063 A T no 5100703
chr17 78198117 rs139381467 T TGA,TTG no 5100704
chr17 78198131 rs543114066 TGA T
BATF PRDM1 RREB1
5100705
chr17 78198158 rs71368064 G T
MGA PLAG1 RREB1 TBX1 TBX15 TBX20 TBX4 TBX5
5100706
chr17 78198163 rs148238632 A AGT
PLAG1 RREB1
5100707
chr17 78198169 rs10664170 A C,T no 5100708
chr17 78198169 rs533069689 AGT A no 5100709
chr17 78198171 rs536804384 TGC T
NRF1
5100710
chr17 78198171 rs7406200 T A,C
NRF1
5100711
chr17 78198173 rs28613213 C T
NRF1
5100712
chr17 78198174 rs149076212 G A
NRF1
5100713
chr17 78198175 rs199986179 C T
NRF1
5100714
chr17 78198176 rs112708187 G A
NRF1
5100715
chr17 78198177 rs533782237 C T
NRF1
5100716
chr17 78198178 rs528362390 G A
NRF1
5100717
chr17 78198181 rs369710946 C T
NRF1
5100718
chr17 78198181 rs534632573 CGT C
NRF1
5100719
chr17 78198182 rs117687210 G A
NRF1
5100720
chr17 78198197 rs539343227 AGT A no 5100721
chr17 78198209 rs542845084 AGTGT A
PRDM1
5100722
chr17 78198209 rs572983364 AGT A
PRDM1
5100723
chr17 78198209 rs763439323 AGT A
PRDM1
5100724
chr17 78198243 rs146406421 A AGAGTGTGC
RREB1 TBX2 TBX20
5100725
chr17 78198243 rs370545027 A AGAGTGTGC
RREB1 TBX2 TBX20
5100726
chr17 78198243 rs7405852 A C,T
RREB1 TBX2 TBX20
5100727
chr17 78198245 rs527644606 T A
RREB1
5100728
chr17 78198251 rs546200120 T C no 5100729
chr17 78198255 rs564351394 A T no 5100730
chr17 78198325 rs147550825 G T
LFA1
5100731
chr17 78198361 rs529514705 C T
GLIS3 ZIC1 ZIC3 ZIC4
5100732
chr17 78198362 rs113733443 G A
GLIS3 ZIC1 ZIC3 ZIC4
5100733
chr17 78198398 rs571003137 G C
CEBPA
5100734
chr17 78198413 rs191999062 G A
TBX5
5100735
Genes possibly regulated by vista26316[chr17:78198081-78198434]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 78109013 78120982 - EIF4A3 ENSG00000141543.5 78120982 0.65 1.0 16332 22901
chr17 78143791 78183130 + CARD14 ENSG00000141527.12 78143791 0.85 1.0 16333 45710
chr17 78180515 78194722 - SGSH ENSG00000181523.8 78194722 0.66 1.0 16334 96641
chr17 78193498 78227299 + SLC26A11 ENSG00000181045.10 78193498 0.72 1.0 16335 95417
chr17 78234665 78372586 + RNF213 ENSG00000173821.15 78234665 0.88 1.0 16336 63769
Expression level of Genes
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miRNAs possibly regulated by vista26316[chr17:78198081-78198434]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results