EnhancerDB
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  3. vista26317[chr17:78228476-78228940]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26317[chr17:78228476-78228940]
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Tissue distribution of vista26317
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Transcription factor that possibly regulate vista26317[chr17:78228476-78228940]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 78228383 78228933 GATA2 UCSC Txn Factor no Conserved 108306372
chr17 78228431 78228981 E2F1 UCSC Txn Factor no Conserved 108306375
chr17 78228472 78228990 GATA3 UCSC Txn Factor no Conserved 108306382
chr17 78228485 78228985 EP300 UCSC Txn Factor no Conserved 108306383
chr17 78228510 78228878 NR3C1 UCSC Txn Factor no Conserved 108306390
chr17 78228527 78228934 TCF12 UCSC Txn Factor no Conserved 108306393
chr17 78228533 78228990 GATA1 UCSC Txn Factor no Conserved 108306397
chr17 78228541 78228981 TEAD4 UCSC Txn Factor no Conserved 108306402
chr17 78228541 78229027 STAT1 UCSC Txn Factor no Conserved 108306404
chr17 78228561 78228930 JUND UCSC Txn Factor no Conserved 108306410
chr17 78228562 78228891 FOXA1 UCSC Txn Factor no Conserved 108306412
chr17 78228570 78228894 BACH1 UCSC Txn Factor no Conserved 108306415
chr17 78228574 78228974 FOS UCSC Txn Factor no Conserved 108306422
chr17 78228575 78228891 EBF1 UCSC Txn Factor no Conserved 108306423
chr17 78228575 78228925 FOSL2 UCSC Txn Factor no Conserved 108306424
chr17 78228591 78229001 STAT3 UCSC Txn Factor no Conserved 108306432
chr17 78228604 78228924 MAFK UCSC Txn Factor no Conserved 108306438
chr17 78228607 78228957 STAT5A UCSC Txn Factor no Conserved 108306443
chr17 78228648 78228847 MAFF UCSC Txn Factor no Conserved 108306466
chr17 78228484 78228498 RXRB JASPAR yes 21314181
chr17 78228484 78228498 RXRG JASPAR yes 21314182
chr17 78228484 78228499 NR2C2 JASPAR yes 21314183
chr17 78228497 78228501 H1TF2 TRANSFAC yes 21314184
chr17 78228497 78228501 NFE TRANSFAC yes 21314185
chr17 78228497 78228501 SRF TRANSFAC yes 21314186
chr17 78228510 78228523 NR2F1 JASPAR yes 21314187
chr17 78228514 78228522 CREB1 JASPAR yes 21314188
chr17 78228514 78228529 TFAP2A JASPAR yes 21314189
chr17 78228517 78228532 HSF1 JASPAR yes 21314190
chr17 78228523 78228538 STAT2 JASPAR yes 21314191
chr17 78228524 78228538 STAT1 JASPAR yes 21314192
chr17 78228539 78228553 IRF7 JASPAR yes 21314193
chr17 78228551 78228555 NFE TRANSFAC yes 21314194
chr17 78228575 78228589 GLIS2 JASPAR yes 21314195
chr17 78228610 78228614 YY1 TRANSFAC yes 21314196
chr17 78228625 78228635 TEAD1 JASPAR yes 21314197
chr17 78228631 78228642 ESRRA JASPAR yes 21314198
chr17 78228631 78228642 ESRRB JASPAR yes 21314199
chr17 78228633 78228652 PAX5 JASPAR yes 21314200
chr17 78228635 78228639 LFA1 TRANSFAC yes 21314201
chr17 78228638 78228652 PAX6 JASPAR yes 21314202
chr17 78228648 78228662 NR2F1 JASPAR yes 21314203
chr17 78228666 78228686 TBX19 JASPAR yes 21314204
chr17 78228681 78228695 FOXF2 JASPAR yes 21314205
chr17 78228681 78228696 FOXP1 JASPAR yes 21314206
chr17 78228682 78228693 FOXA1 JASPAR yes 21314207
chr17 78228682 78228697 FOXA1 JASPAR yes 21314208
chr17 78228683 78228695 FOXC2 JASPAR yes 21314209
chr17 78228684 78228695 FOXP2 JASPAR yes 21314210
chr17 78228685 78228693 FOXO3 JASPAR yes 21314211
chr17 78228686 78228693 FOXD2 JASPAR yes 21314212
chr17 78228686 78228693 FOXI1 JASPAR yes 21314213
chr17 78228686 78228693 FOXL1 JASPAR yes 21314214
chr17 78228686 78228693 FOXO4 JASPAR yes 21314215
chr17 78228686 78228693 FOXO6 JASPAR yes 21314216
chr17 78228686 78228693 FOXP3 JASPAR yes 21314217
chr17 78228686 78228694 FOXD1 JASPAR yes 21314218
chr17 78228686 78228694 FOXO3 JASPAR yes 21314219
chr17 78228699 78228704 SP1 TRANSFAC yes 21314220
chr17 78228699 78228708 HIC2 JASPAR yes 21314221
chr17 78228702 78228706 LFA1 TRANSFAC yes 21314222
chr17 78228713 78228727 IRF8 JASPAR yes 21314223
chr17 78228713 78228728 IRF9 JASPAR yes 21314224
chr17 78228714 78228718 NFE TRANSFAC yes 21314225
chr17 78228722 78228729 TBP TRANSFAC yes 21314226
chr17 78228722 78228729 TFIID TRANSFAC yes 21314227
chr17 78228727 78228739 POU3F1 JASPAR yes 21314228
chr17 78228727 78228739 POU3F2 JASPAR yes 21314229
chr17 78228727 78228740 POU3F3 JASPAR yes 21314230
chr17 78228728 78228740 POU2F1 JASPAR yes 21314231
chr17 78228729 78228738 POU3F4 JASPAR yes 21314232
chr17 78228729 78228738 POU5F1B JASPAR yes 21314233
chr17 78228736 78228751 SCRT1 JASPAR yes 21314234
chr17 78228737 78228747 FIGLA JASPAR yes 21314235
chr17 78228737 78228747 TCF3 JASPAR yes 21314236
chr17 78228738 78228747 SNAI2 JASPAR yes 21314237
chr17 78228739 78228744 USF2 TRANSFAC yes 21314238
chr17 78228742 78228753 FOSL2 JASPAR yes 21314239
chr17 78228742 78228753 JUNB JASPAR yes 21314240
chr17 78228743 78228754 FOS JASPAR yes 21314241
chr17 78228743 78228754 FOSL1 JASPAR yes 21314242
chr17 78228743 78228754 JUND JASPAR yes 21314243
chr17 78228743 78228761 MAFF JASPAR yes 21314244
chr17 78228744 78228751 JUN TRANSFAC yes 21314245
chr17 78228744 78228755 NFE2L2 JASPAR yes 21314246
chr17 78228744 78228758 JUN JASPAR yes 21314247
chr17 78228744 78228759 MAFK JASPAR yes 21314248
chr17 78228748 78228759 NRL JASPAR yes 21314249
chr17 78228761 78228772 STAT1 JASPAR yes 21314250
chr17 78228786 78228800 JUN JASPAR yes 21314251
chr17 78228787 78228794 JUN TRANSFAC yes 21314252
chr17 78228787 78228798 BATF JASPAR yes 21314253
chr17 78228794 78228809 STAT1 JASPAR yes 21314254
chr17 78228796 78228807 STAT1 JASPAR yes 21314255
chr17 78228796 78228807 STAT3 JASPAR yes 21314256
chr17 78228797 78228809 EHF JASPAR yes 21314257
chr17 78228797 78228810 ELF3 JASPAR yes 21314258
chr17 78228798 78228809 ELF5 JASPAR yes 21314259
chr17 78228799 78228806 ETS1 TRANSFAC yes 21314260
chr17 78228799 78228810 FLI1 JASPAR yes 21314261
chr17 78228834 78228838 ESR1 TRANSFAC yes 21314262
chr17 78228837 78228845 HOXA5 JASPAR yes 21314263
chr17 78228884 78228887 MYB TRANSFAC yes 21314264
SNP sites on vista26317[chr17:78228476-78228940]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 78228483 rs8074650 A G
E2F1 GATA2 GATA3
5100865
chr17 78228584 rs147068552 G A
BACH1 E2F1 EBF1 EP300 FOS FOSL2 FOXA1 GATA1 GATA2 GATA3 GLIS2 JUND NR3C1 STAT1 TCF12 TEAD4
5100866
chr17 78228603 rs77375956 G A
BACH1 E2F1 EBF1 EP300 FOS FOSL2 FOXA1 GATA1 GATA2 GATA3 JUND NR3C1 STAT1 STAT3 TCF12 TEAD4
5100867
chr17 78228692 rs138082503 C T
BACH1 E2F1 EBF1 EP300 FOS FOSL2 FOXA1 FOXC2 FOXD1 FOXD2 FOXF2 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP1 FOXP2 FOXP3 GATA1 GATA2 GATA3 JUND MAFF MAFK NR3C1 STAT1 STAT3 STAT5A TCF12 TEAD4
5100868
chr17 78228810 rs114093448 G C
BACH1 E2F1 EBF1 ELF3 EP300 FLI1 FOS FOSL2 FOXA1 GATA1 GATA2 GATA3 JUND MAFF MAFK NR3C1 STAT1 STAT3 STAT5A TCF12 TEAD4
5100869
chr17 78228821 rs114744644 G A
BACH1 E2F1 EBF1 EP300 FOS FOSL2 FOXA1 GATA1 GATA2 GATA3 JUND MAFF MAFK NR3C1 STAT1 STAT3 STAT5A TCF12 TEAD4
5100870
chr17 78228838 rs112301496 C T
BACH1 E2F1 EBF1 EP300 ESR1 FOS FOSL2 FOXA1 GATA1 GATA2 GATA3 HOXA5 JUND MAFF MAFK NR3C1 STAT1 STAT3 STAT5A TCF12 TEAD4
5100871
chr17 78228898 rs80074210 G A
E2F1 EP300 FOS FOSL2 GATA1 GATA2 GATA3 JUND MAFK STAT1 STAT3 STAT5A TCF12 TEAD4
5100872
Genes possibly regulated by vista26317[chr17:78228476-78228940]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 78143791 78183130 + CARD14 ENSG00000141527.12 78143791 0.85 1.0 16333 15315
chr17 78180515 78194722 - SGSH ENSG00000181523.8 78194722 0.66 1.0 16334 66246
chr17 78193498 78227299 + SLC26A11 ENSG00000181045.10 78193498 0.72 1.0 16335 65022
chr17 78234665 78372586 + RNF213 ENSG00000173821.15 78234665 0.88 1.0 16336 94275
Expression level of Genes
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miRNAs possibly regulated by vista26317[chr17:78228476-78228940]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results