EnhancerDB
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  3. vista26329[chr17:78500391-78500494]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26329[chr17:78500391-78500494]
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Tissue distribution of vista26329
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Transcription factor that possibly regulate vista26329[chr17:78500391-78500494]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 78500376 78500397 ZNF263 JASPAR yes 21314758
chr17 78500376 78500397 ZNF263 JASPAR yes 56250287
chr17 78500410 78500430 ESR1 JASPAR yes 21314759
chr17 78500410 78500430 ESR1 JASPAR yes 56250289
chr17 78500412 78500432 PPARG JASPAR yes 21314760
chr17 78500412 78500432 PPARG JASPAR yes 56250290
chr17 78500413 78500431 ESR2 JASPAR yes 21314761
chr17 78500413 78500431 ESR2 JASPAR yes 56250291
chr17 78500414 78500431 ESR1 JASPAR yes 21314762
chr17 78500414 78500431 ESR1 JASPAR yes 56250292
chr17 78500414 78500432 ESR2 JASPAR yes 21314763
chr17 78500414 78500432 ESR2 JASPAR yes 56250293
chr17 78500415 78500430 ESR2 JASPAR yes 21314764
chr17 78500415 78500430 ESR2 JASPAR yes 56250294
chr17 78500415 78500435 ESR1 JASPAR yes 21314765
chr17 78500415 78500435 ESR1 JASPAR yes 56250295
chr17 78500421 78500436 TFAP2C JASPAR yes 21314766
chr17 78500421 78500436 TFAP2C JASPAR yes 56250296
chr17 78500423 78500435 INSM1 JASPAR yes 21314767
chr17 78500423 78500435 INSM1 JASPAR yes 56250297
chr17 78500434 78500439 SP1 TRANSFAC yes 21314768
chr17 78500434 78500439 SP1 TRANSFAC yes 56250298
chr17 78500438 78500442 H1TF2 TRANSFAC yes 21314769
chr17 78500438 78500442 NFE TRANSFAC yes 21314770
chr17 78500438 78500442 SRF TRANSFAC yes 21314771
chr17 78500438 78500442 H1TF2 TRANSFAC yes 56250299
chr17 78500438 78500442 NFE TRANSFAC yes 56250300
chr17 78500438 78500442 SRF TRANSFAC yes 56250301
chr17 78500448 78500465 PAX1 JASPAR yes 21314772
chr17 78500448 78500465 PAX9 JASPAR yes 21314773
chr17 78500448 78500465 PAX1 JASPAR yes 56250302
chr17 78500448 78500465 PAX9 JASPAR yes 56250303
chr17 78500462 78500477 RFX5 JASPAR yes 21314774
chr17 78500462 78500477 RFX5 JASPAR yes 56250304
chr17 78500471 78500476 ETS2 TRANSFAC yes 21314775
chr17 78500471 78500476 ETS2 TRANSFAC yes 56250305
chr17 78500471 78500482 NFKB1 JASPAR yes 21314776
chr17 78500471 78500482 NFKB1 JASPAR yes 56250306
chr17 78500472 78500483 NFKB1 JASPAR yes 21314777
chr17 78500472 78500483 NFKB1 JASPAR yes 56250307
chr17 78500479 78500488 TFAP2A JASPAR yes 21314778
chr17 78500479 78500488 TFAP2A JASPAR yes 56250308
chr17 78500482 78500500 ESR1 JASPAR yes 21314779
chr17 78500482 78500500 ESR1 JASPAR yes 56250309
chr17 78500483 78500488 SP1 TRANSFAC yes 21314780
chr17 78500483 78500488 SP1 TRANSFAC yes 56250310
chr17 78500490 78500494 ESR1 TRANSFAC yes 21314781
chr17 78500490 78500494 ESR1 TRANSFAC yes 56250311
SNP sites on vista26329[chr17:78500391-78500494]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 78500436 rs73449677 C T
SP1 TFAP2C
5102417
chr17 78500458 rs146998596 C T
PAX1 PAX9
5102418
chr17 78500481 rs568484295 C G
NFKB1 TFAP2A
5102419
Genes possibly regulated by vista26329[chr17:78500391-78500494]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 78440948 78451643 - NPTX1 ENSG00000171246.5 78451643 0.95 0.98 16338 51252
chr17 78518619 78940171 + RPTOR ENSG00000141564.9 78518619 0.64 1.0 16339 81875
Expression level of Genes
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miRNAs possibly regulated by vista26329[chr17:78500391-78500494]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results