EnhancerDB
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  3. vista26364[chr17:78901796-78901941]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26364[chr17:78901796-78901941]
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Tissue distribution of vista26364
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Transcription factor that possibly regulate vista26364[chr17:78901796-78901941]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 78901723 78902122 CTCF UCSC Txn Factor no Conserved 108308063
chr17 78901799 78901810 FLI1 JASPAR yes 21316488
chr17 78901799 78901810 FLI1 JASPAR yes 56292126
chr17 78901814 78901825 BATF JASPAR yes 21316489
chr17 78901814 78901825 BATF JASPAR yes 56292127
chr17 78901818 78901824 JUN TRANSFAC yes 21316490
chr17 78901818 78901824 JUN TRANSFAC yes 56292128
chr17 78901820 78901835 HNF1A JASPAR yes 21316491
chr17 78901820 78901835 HNF1A JASPAR yes 56292129
chr17 78901821 78901834 HNF1B JASPAR yes 21316492
chr17 78901821 78901834 HNF1B JASPAR yes 56292130
chr17 78901831 78901841 GABPA JASPAR yes 21316493
chr17 78901831 78901841 GABPA JASPAR yes 56292131
chr17 78901834 78901841 SPIB JASPAR yes 21316494
chr17 78901834 78901841 SPIB JASPAR yes 56292132
chr17 78901839 78901845 NFE2 TRANSFAC yes 21316495
chr17 78901839 78901845 NFE2 TRANSFAC yes 56292133
chr17 78901839 78901851 INSM1 JASPAR yes 21316496
chr17 78901839 78901851 INSM1 JASPAR yes 56292134
chr17 78901844 78901854 NFIA JASPAR yes 21316497
chr17 78901844 78901854 NFIA JASPAR yes 56292135
chr17 78901846 78901852 NFIC JASPAR yes 21316498
chr17 78901846 78901852 NFIC JASPAR yes 56292136
chr17 78901853 78901857 YY1 TRANSFAC yes 21316499
chr17 78901853 78901857 YY1 TRANSFAC yes 56292137
chr17 78901853 78901868 FOXP1 JASPAR yes 21316500
chr17 78901853 78901868 FOXP1 JASPAR yes 56292138
chr17 78901856 78901867 FOXP2 JASPAR yes 21316501
chr17 78901856 78901867 FOXP2 JASPAR yes 56292139
chr17 78901857 78901865 FOXO3 JASPAR yes 21316502
chr17 78901857 78901865 FOXO3 JASPAR yes 56292140
chr17 78901858 78901867 SRY JASPAR yes 21316503
chr17 78901858 78901867 SRY JASPAR yes 56292141
chr17 78901893 78901911 ESR2 JASPAR yes 21316504
chr17 78901893 78901911 ESR2 JASPAR yes 56292142
chr17 78901912 78901919 NFATC2 JASPAR yes 21316505
chr17 78901912 78901919 NFATC2 JASPAR yes 56292143
chr17 78901927 78901939 GLI2 JASPAR yes 21316506
chr17 78901927 78901939 GLI2 JASPAR yes 56292144
chr17 78901928 78901940 ZBTB7A JASPAR yes 21316507
chr17 78901928 78901940 ZBTB7A JASPAR yes 56292145
chr17 78901938 78901952 MTF1 JASPAR yes 21316508
chr17 78901938 78901952 MTF1 JASPAR yes 56292146
SNP sites on vista26364[chr17:78901796-78901941]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 78901827 rs7208237 T C
CTCF HNF1A HNF1B
5107635
chr17 78901883 rs543356089 C T
CTCF
5107636
Genes possibly regulated by vista26364[chr17:78901796-78901941]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 78965398 78983317 + CHMP6 ENSG00000176108.5 78965398 0.52 0.99 16340 36543
chr17 78977135 78978932 + AC127496.1 ENSG00000175911.4 78977135 0.71 1.0 16341 24806
Expression level of Genes
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miRNAs possibly regulated by vista26364[chr17:78901796-78901941]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results