EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id	More
chr17	78962721	78963114	CHD2	UCSC Txn Factor	no	Conserved	108308229
chr17	78962756	78963355	CTCF	UCSC Txn Factor	no	Conserved	108308236
chr17	78962826	78963090	RAD21	UCSC Txn Factor	no	Conserved	108308255
chr17	78962858	78962862	YY1	TRANSFAC	yes		21316545
chr17	78962864	78962870	GATA3	JASPAR	yes		21316546
chr17	78962867	78962882	ZBTB33	JASPAR	yes		21316547
chr17	78962870	78962884	E2F7	JASPAR	yes		21316548
chr17	78962885	78962890	TFAP2A	TRANSFAC	yes		21316549
chr17	78962885	78962891	MZF1	JASPAR	yes		21316550
chr17	78962902	78962913	FOXH1	JASPAR	yes		21316551
chr17	78962903	78962909	ZNF354C	JASPAR	yes		21316552
chr17	78962939	78962958	CTCF	JASPAR	yes		21316553

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id	More
chr17	78962839	rs74001194	A	G	CHD2 CTCF RAD21	5108330
chr17	78962881	rs11150760	G	A	CHD2 CTCF E2F7 RAD21 ZBTB33	5108331
chr17	78962911	rs578256822	C	CG	CHD2 CTCF FOXH1 RAD21	5108332
chr17	78962914	rs140694562	G	C,T	CHD2 CTCF RAD21	5108333
chr17	78962932	rs4969325	A	G	CHD2 CTCF RAD21	5108334
chr17	78962945	rs4969326	A	G	CHD2 CTCF RAD21	5108335

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id	More
chr17	78965398	78983317	+	CHMP6	ENSG00000176108.5	78965398	0.52	0.99	16340	97578
chr17	78977135	78978932	+	AC127496.1	ENSG00000175911.4	78977135	0.71	1.0	16341	85841
chr17	79008948	79091232	+	BAIAP2	ENSG00000175866.11	79008948	0.75	1.0	16342	54028

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results