EnhancerDB
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  3. vista26371[chr17:79018501-79018654]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26371[chr17:79018501-79018654]
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Tissue distribution of vista26371
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Transcription factor that possibly regulate vista26371[chr17:79018501-79018654]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 79018497 79018501 NFE TRANSFAC yes 21316801
chr17 79018497 79018501 NFE TRANSFAC yes 56300573
chr17 79018514 79018525 HOXD12 JASPAR yes 21316802
chr17 79018514 79018525 HOXD12 JASPAR yes 56300574
chr17 79018549 79018560 BATF JASPAR yes 21316803
chr17 79018549 79018560 BATF JASPAR yes 56300575
chr17 79018569 79018579 HOXC10 JASPAR yes 21316804
chr17 79018569 79018579 HOXD11 JASPAR yes 21316805
chr17 79018569 79018579 HOXC10 JASPAR yes 56300576
chr17 79018569 79018579 HOXD11 JASPAR yes 56300577
chr17 79018569 79018580 HOXC11 JASPAR yes 21316806
chr17 79018569 79018580 HOXC11 JASPAR yes 56300578
chr17 79018570 79018579 CDX1 JASPAR yes 21316807
chr17 79018570 79018579 CDX1 JASPAR yes 56300579
chr17 79018570 79018581 CDX2 JASPAR yes 21316808
chr17 79018570 79018581 CDX2 JASPAR yes 56300580
chr17 79018580 79018590 GABPA JASPAR yes 21316809
chr17 79018580 79018590 GABPA JASPAR yes 56300581
chr17 79018581 79018589 EHF JASPAR yes 21316810
chr17 79018581 79018589 EHF JASPAR yes 56300582
chr17 79018583 79018602 RFX2 JASPAR yes 21316811
chr17 79018583 79018602 RFX2 JASPAR yes 56300583
chr17 79018587 79018603 RFX2 JASPAR yes 21316812
chr17 79018587 79018603 RFX3 JASPAR yes 21316813
chr17 79018587 79018603 RFX4 JASPAR yes 21316814
chr17 79018587 79018603 RFX5 JASPAR yes 21316815
chr17 79018587 79018603 RFX2 JASPAR yes 56300584
chr17 79018587 79018603 RFX3 JASPAR yes 56300585
chr17 79018587 79018603 RFX4 JASPAR yes 56300586
chr17 79018587 79018603 RFX5 JASPAR yes 56300587
chr17 79018590 79018605 RFX5 JASPAR yes 21316816
chr17 79018590 79018605 RFX5 JASPAR yes 56300588
chr17 79018595 79018600 TFAP2A TRANSFAC yes 21316817
chr17 79018595 79018600 TFAP2A TRANSFAC yes 56300589
chr17 79018595 79018601 MZF1 JASPAR yes 21316818
chr17 79018595 79018601 MZF1 JASPAR yes 56300590
chr17 79018599 79018609 MSC JASPAR yes 21316819
chr17 79018599 79018609 TFAP4 JASPAR yes 21316820
chr17 79018599 79018609 MSC JASPAR yes 56300591
chr17 79018599 79018609 TFAP4 JASPAR yes 56300592
chr17 79018629 79018643 TLX1 JASPAR yes 21316821
chr17 79018629 79018643 TLX1 JASPAR yes 56300593
chr17 79018630 79018644 TLX1 JASPAR yes 21316822
chr17 79018630 79018644 TLX1 JASPAR yes 56300594
chr17 79018652 79018666 TLX1 JASPAR yes 21316823
chr17 79018652 79018666 TLX1 JASPAR yes 56300595
chr17 79018652 79018667 TFAP2A JASPAR yes 21316824
chr17 79018652 79018667 TFAP2A JASPAR yes 56300596
SNP sites on vista26371[chr17:79018501-79018654]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 79018508 rs530881275 G A no 5109137
chr17 79018542 rs151311204 T C no 5109138
chr17 79018557 rs73364028 G A,C
BATF
5109139
chr17 79018560 rs185833317 C T
BATF
5109140
Genes possibly regulated by vista26371[chr17:79018501-79018654]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 78965398 78983317 + CHMP6 ENSG00000176108.5 78965398 0.52 0.99 16340 46897
chr17 78977135 78978932 + AC127496.1 ENSG00000175911.4 78977135 0.71 1.0 16341 58634
chr17 79008948 79091232 + BAIAP2 ENSG00000175866.11 79008948 0.75 1.0 16342 90447
Expression level of Genes
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miRNAs possibly regulated by vista26371[chr17:79018501-79018654]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results