EnhancerDB
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  3. vista26387[chr17:79128807-79129119]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26387[chr17:79128807-79129119]
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Tissue distribution of vista26387
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Transcription factor that possibly regulate vista26387[chr17:79128807-79129119]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 79128796 79128812 SOX4 JASPAR yes 21317588
chr17 79128796 79128812 SOX4 JASPAR yes 56307516
chr17 79128813 79128823 TBX21 JASPAR yes 21317589
chr17 79128813 79128823 TBX21 JASPAR yes 56307518
chr17 79128813 79128824 TBX20 JASPAR yes 21317590
chr17 79128813 79128824 TBX2 JASPAR yes 21317591
chr17 79128813 79128824 TBX20 JASPAR yes 56307519
chr17 79128813 79128824 TBX2 JASPAR yes 56307520
chr17 79128813 79128826 EOMES JASPAR yes 21317592
chr17 79128813 79128826 EOMES JASPAR yes 56307521
chr17 79128814 79128822 MGA JASPAR yes 21317593
chr17 79128814 79128822 TBX15 JASPAR yes 21317594
chr17 79128814 79128822 TBX1 JASPAR yes 21317595
chr17 79128814 79128822 TBX4 JASPAR yes 21317596
chr17 79128814 79128822 TBX5 JASPAR yes 21317597
chr17 79128814 79128822 MGA JASPAR yes 56307522
chr17 79128814 79128822 TBX15 JASPAR yes 56307523
chr17 79128814 79128822 TBX1 JASPAR yes 56307524
chr17 79128814 79128822 TBX4 JASPAR yes 56307525
chr17 79128814 79128822 TBX5 JASPAR yes 56307526
chr17 79128814 79128824 TBR1 JASPAR yes 21317598
chr17 79128814 79128824 TBR1 JASPAR yes 56307527
chr17 79128845 79128860 LEF1 JASPAR yes 21317599
chr17 79128845 79128860 LEF1 JASPAR yes 56307528
chr17 79128860 79128873 SCRT2 JASPAR yes 21317600
chr17 79128860 79128873 SCRT2 JASPAR yes 56307529
chr17 79128917 79128923 ETS1 JASPAR yes 21317601
chr17 79128917 79128923 ETS1 JASPAR yes 56307530
chr17 79128919 79128933 NR2F1 JASPAR yes 21317602
chr17 79128919 79128933 RXRG JASPAR yes 21317603
chr17 79128919 79128933 NR2F1 JASPAR yes 56307531
chr17 79128919 79128933 RXRG JASPAR yes 56307532
chr17 79128929 79128936 SPI1 JASPAR yes 21317604
chr17 79128929 79128936 SPI1 JASPAR yes 56307533
chr17 79128929 79128937 EHF JASPAR yes 21317605
chr17 79128929 79128937 EHF JASPAR yes 56307534
chr17 79128970 79128974 YY1 TRANSFAC yes 21317606
chr17 79128970 79128974 YY1 TRANSFAC yes 56307535
chr17 79128975 79128979 LFA1 TRANSFAC yes 21317607
chr17 79128975 79128979 LFA1 TRANSFAC yes 56307536
chr17 79128980 79128988 GATA3 JASPAR yes 21317608
chr17 79128980 79128988 GATA3 JASPAR yes 56307537
chr17 79129005 79129017 ZBTB7A JASPAR yes 21317609
chr17 79129005 79129017 ZBTB7A JASPAR yes 56307538
chr17 79129017 79129027 BHLHE40 JASPAR yes 21317610
chr17 79129017 79129027 CLOCK JASPAR yes 21317611
chr17 79129017 79129027 HEY1 JASPAR yes 21317612
chr17 79129017 79129027 MAX JASPAR yes 21317613
chr17 79129017 79129027 MNT JASPAR yes 21317614
chr17 79129017 79129027 BHLHE40 JASPAR yes 56307539
chr17 79129017 79129027 CLOCK JASPAR yes 56307540
chr17 79129017 79129027 HEY1 JASPAR yes 56307541
chr17 79129017 79129027 MAX JASPAR yes 56307542
chr17 79129017 79129027 MNT JASPAR yes 56307543
chr17 79129019 79129024 MYC TRANSFAC yes 21317615
chr17 79129019 79129024 USF1 TRANSFAC yes 21317616
chr17 79129019 79129024 USF2 TRANSFAC yes 21317617
chr17 79129019 79129024 MYC TRANSFAC yes 56307544
chr17 79129019 79129024 USF1 TRANSFAC yes 56307545
chr17 79129019 79129024 USF2 TRANSFAC yes 56307546
chr17 79129085 79129089 YY1 TRANSFAC yes 21317618
chr17 79129085 79129089 YY1 TRANSFAC yes 56307547
chr17 79129110 79129120 ID4 JASPAR yes 21317619
chr17 79129110 79129120 TCF4 JASPAR yes 21317620
chr17 79129110 79129120 ID4 JASPAR yes 56307548
chr17 79129110 79129120 TCF4 JASPAR yes 56307549
chr17 79129116 79129127 NRF1 JASPAR yes 21317621
chr17 79129116 79129127 NRF1 JASPAR yes 56307550
SNP sites on vista26387[chr17:79128807-79129119]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 79128886 rs76744164 G A no 5110605
chr17 79128918 rs562079877 C T
ETS1
5110606
chr17 79128969 rs115697474 C T no 5110607
Genes possibly regulated by vista26387[chr17:79128807-79129119]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 79091095 79139877 - AATK ENSG00000181409.7 79139877 0.83 1.0 16343 89242
chr17 79163393 79196799 - AZI1 ENSG00000141577.9 79196799 0.61 1.0 16344 32320
chr17 79202077 79212891 - ENTHD2 ENSG00000167302.5 79212891 0.68 1.0 16345 16228
chr17 79213039 79215081 + C17orf89 ENSG00000224877.3 79213039 0.88 0.99 16346 16080
Expression level of Genes
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miRNAs possibly regulated by vista26387[chr17:79128807-79129119]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 79107028 79107046 - hsa-miR-1250-3p MIMAT0026740 79140020 0.03336448598130841 0.952295 0.676023 762
Expression level of miRNAs
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