EnhancerDB
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  3. vista26415[chr17:79421564-79421842]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26415[chr17:79421564-79421842]
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Tissue distribution of vista26415
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Transcription factor that possibly regulate vista26415[chr17:79421564-79421842]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 79421564 79421584 RREB1 JASPAR yes 21319621
chr17 79421565 79421585 RREB1 JASPAR yes 21319622
chr17 79421567 79421587 RREB1 JASPAR yes 21319623
chr17 79421569 79421579 SP1 JASPAR yes 21319624
chr17 79421569 79421589 RREB1 JASPAR yes 21319625
chr17 79421570 79421590 RREB1 JASPAR yes 21319626
chr17 79421571 79421592 ZNF263 JASPAR yes 21319627
chr17 79421574 79421584 SP1 JASPAR yes 21319628
chr17 79421574 79421594 RREB1 JASPAR yes 21319629
chr17 79421575 79421585 SP1 JASPAR yes 21319630
chr17 79421577 79421597 RREB1 JASPAR yes 21319631
chr17 79421579 79421588 ZEB1 JASPAR yes 21319632
chr17 79421580 79421590 TCF4 JASPAR yes 21319633
chr17 79421581 79421590 SNAI2 JASPAR yes 21319634
chr17 79421582 79421587 USF2 TRANSFAC yes 21319635
chr17 79421585 79421591 NFE2 TRANSFAC yes 21319636
chr17 79421594 79421603 SP1 TRANSFAC yes 21319637
chr17 79421595 79421601 SP1 TRANSFAC yes 21319638
chr17 79421595 79421605 SP1 JASPAR yes 21319639
chr17 79421596 79421603 SP1 TRANSFAC yes 21319640
chr17 79421597 79421602 SP1 TRANSFAC yes 21319641
chr17 79421597 79421603 SP1 TRANSFAC yes 21319642
chr17 79421605 79421610 SP1 TRANSFAC yes 21319643
chr17 79421616 79421625 HIC2 JASPAR yes 21319644
chr17 79421617 79421626 NFIX JASPAR yes 21319645
chr17 79421618 79421624 NFIC JASPAR yes 21319646
chr17 79421630 79421643 ZBTB18 JASPAR yes 21319647
chr17 79421641 79421651 ETV6 JASPAR yes 21319648
chr17 79421643 79421649 ETS1 JASPAR yes 21319649
chr17 79421672 79421689 RXRA JASPAR yes 21319650
chr17 79421682 79421688 NFE2 TRANSFAC yes 21319651
chr17 79421752 79421761 SP1 TRANSFAC yes 21319652
chr17 79421755 79421761 NFE2 TRANSFAC yes 21319653
chr17 79421771 79421784 ZBTB18 JASPAR yes 21319654
chr17 79421772 79421782 MAX JASPAR yes 21319655
chr17 79421786 79421790 NFE TRANSFAC yes 21319656
chr17 79421797 79421807 ID4 JASPAR yes 21319657
chr17 79421797 79421807 TCF4 JASPAR yes 21319658
chr17 79421801 79421810 NFIX JASPAR yes 21319659
chr17 79421801 79421811 NFIA JASPAR yes 21319660
chr17 79421803 79421809 NFIC JASPAR yes 21319661
SNP sites on vista26415[chr17:79421564-79421842]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 79421584 rs9908816 A G
RREB1 SNAI2 SP1 TCF4 USF2 ZEB1 ZNF263
5113900
chr17 79421599 rs561193632 C T
SP1
5113901
chr17 79421678 rs138523084 G A
RXRA
5113902
chr17 79421817 rs546489218 G A no 5113903
Genes possibly regulated by vista26415[chr17:79421564-79421842]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 79369275 79375658 + RP11-1055B8.6 ENSG00000263053.3 79369275 0.74 1.0 16349 47711
chr17 79373540 79433357 + RP11-1055B8.7 ENSG00000171282.9 79373540 0.69 1.0 16350 51976
chr17 79476997 79490873 - ACTG1 ENSG00000184009.5 79490873 0.6 1.0 16351 30969
chr17 79495422 79504156 + FSCN2 ENSG00000186765.7 79495422 0.89 1.0 16352 26420
chr17 79506911 79520987 - C17orf70 ENSG00000185504.12 79520987 0.64 1.0 16353 855
Expression level of Genes
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miRNAs possibly regulated by vista26415[chr17:79421564-79421842]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results