EnhancerDB
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  3. vista26419[chr17:79448388-79448678]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26419[chr17:79448388-79448678]
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Tissue distribution of vista26419
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Transcription factor that possibly regulate vista26419[chr17:79448388-79448678]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 79448098 79448840 E2F6 UCSC Txn Factor no Conserved 108309867
chr17 79448126 79448689 MAX UCSC Txn Factor no Conserved 108309869
chr17 79448339 79448719 NFYB UCSC Txn Factor no Conserved 108309881
chr17 79448456 79448678 FOS UCSC Txn Factor no Conserved 108309900
chr17 79448381 79448400 REST JASPAR yes 21319864
chr17 79448381 79448400 REST JASPAR yes 56329762
chr17 79448383 79448397 GLIS2 JASPAR yes 21319865
chr17 79448383 79448397 GLIS2 JASPAR yes 56329763
chr17 79448391 79448396 SP1 TRANSFAC yes 21319866
chr17 79448391 79448396 SP1 TRANSFAC yes 56329764
chr17 79448424 79448436 HINFP JASPAR yes 21319867
chr17 79448424 79448436 HINFP JASPAR yes 56329765
chr17 79448431 79448443 HINFP JASPAR yes 21319868
chr17 79448431 79448443 HINFP JASPAR yes 56329766
chr17 79448436 79448447 TFAP2A JASPAR yes 21319869
chr17 79448436 79448447 TFAP2B JASPAR yes 21319870
chr17 79448436 79448447 TFAP2A JASPAR yes 56329767
chr17 79448436 79448447 TFAP2B JASPAR yes 56329768
chr17 79448437 79448446 TFAP2A JASPAR yes 21319871
chr17 79448437 79448446 TFAP2A JASPAR yes 56329769
chr17 79448470 79448479 SP1 TRANSFAC yes 21319872
chr17 79448470 79448479 SP1 TRANSFAC yes 56329770
chr17 79448471 79448477 SP1 TRANSFAC yes 21319873
chr17 79448471 79448477 SP1 TRANSFAC yes 56329771
chr17 79448471 79448485 ZIC1 JASPAR yes 21319874
chr17 79448471 79448485 ZIC1 JASPAR yes 56329772
chr17 79448471 79448486 ZIC4 JASPAR yes 21319875
chr17 79448471 79448486 ZIC4 JASPAR yes 56329773
chr17 79448473 79448478 SP1 TRANSFAC yes 21319876
chr17 79448473 79448478 SP1 TRANSFAC yes 56329774
chr17 79448484 79448488 H4TF2 TRANSFAC yes 21319877
chr17 79448484 79448488 H4TF2 TRANSFAC yes 56329775
chr17 79448491 79448494 MYB TRANSFAC yes 21319878
chr17 79448491 79448494 MYB TRANSFAC yes 56329776
chr17 79448498 79448509 E2F4 JASPAR yes 21319879
chr17 79448498 79448509 E2F4 JASPAR yes 56329777
chr17 79448506 79448511 SP1 TRANSFAC yes 21319880
chr17 79448506 79448511 SP1 TRANSFAC yes 56329778
chr17 79448506 79448512 SP1 TRANSFAC yes 21319881
chr17 79448506 79448512 SP1 TRANSFAC yes 56329779
chr17 79448507 79448522 ZIC4 JASPAR yes 21319882
chr17 79448507 79448522 ZIC4 JASPAR yes 56329780
chr17 79448508 79448523 ZIC4 JASPAR yes 21319883
chr17 79448508 79448523 ZIC4 JASPAR yes 56329781
chr17 79448509 79448523 GLIS2 JASPAR yes 21319884
chr17 79448509 79448523 ZIC1 JASPAR yes 21319885
chr17 79448509 79448523 GLIS2 JASPAR yes 56329782
chr17 79448509 79448523 ZIC1 JASPAR yes 56329783
chr17 79448511 79448518 USF1 JASPAR yes 21319886
chr17 79448511 79448518 USF1 JASPAR yes 56329784
chr17 79448512 79448517 MYC TRANSFAC yes 21319887
chr17 79448512 79448517 USF1 TRANSFAC yes 21319888
chr17 79448512 79448517 USF2 TRANSFAC yes 21319889
chr17 79448512 79448517 MYC TRANSFAC yes 56329785
chr17 79448512 79448517 USF1 TRANSFAC yes 56329786
chr17 79448512 79448517 USF2 TRANSFAC yes 56329787
chr17 79448512 79448519 USF1 JASPAR yes 21319890
chr17 79448512 79448519 USF1 JASPAR yes 56329788
chr17 79448517 79448522 SP1 TRANSFAC yes 21319891
chr17 79448517 79448522 SP1 TRANSFAC yes 56329789
chr17 79448538 79448548 SP1 JASPAR yes 21319892
chr17 79448538 79448548 SP1 JASPAR yes 56329790
chr17 79448541 79448551 SREBF1 JASPAR yes 21319893
chr17 79448541 79448551 SREBF1 JASPAR yes 56329791
chr17 79448543 79448559 NFYA JASPAR yes 21319894
chr17 79448543 79448559 NFYA JASPAR yes 56329792
chr17 79448546 79448561 NFYB JASPAR yes 21319895
chr17 79448546 79448561 NFYB JASPAR yes 56329793
chr17 79448548 79448553 NFY TRANSFAC yes 21319896
chr17 79448548 79448553 NFY TRANSFAC yes 56329794
chr17 79448558 79448573 NFYB JASPAR yes 21319897
chr17 79448558 79448573 NFYB JASPAR yes 56329795
chr17 79448560 79448576 NFYA JASPAR yes 21319898
chr17 79448560 79448576 NFYA JASPAR yes 56329796
chr17 79448561 79448579 NFYA JASPAR yes 21319899
chr17 79448561 79448579 NFYA JASPAR yes 56329797
chr17 79448565 79448569 H1TF2 TRANSFAC yes 21319900
chr17 79448565 79448569 NFE TRANSFAC yes 21319901
chr17 79448565 79448569 SRF TRANSFAC yes 21319902
chr17 79448565 79448569 H1TF2 TRANSFAC yes 56329798
chr17 79448565 79448569 NFE TRANSFAC yes 56329799
chr17 79448565 79448569 SRF TRANSFAC yes 56329800
chr17 79448588 79448599 NRF1 JASPAR yes 21319903
chr17 79448588 79448599 NRF1 JASPAR yes 56329801
chr17 79448591 79448609 NFYA JASPAR yes 21319904
chr17 79448591 79448609 NFYA JASPAR yes 56329802
chr17 79448594 79448610 NFYA JASPAR yes 21319905
chr17 79448594 79448610 NFYA JASPAR yes 56329803
chr17 79448597 79448612 NFYB JASPAR yes 21319906
chr17 79448597 79448612 NFYB JASPAR yes 56329804
chr17 79448599 79448604 NFY TRANSFAC yes 21319907
chr17 79448599 79448604 NFY TRANSFAC yes 56329805
chr17 79448609 79448614 SP1 TRANSFAC yes 21319908
chr17 79448609 79448614 SP1 TRANSFAC yes 56329806
chr17 79448616 79448628 TFAP2A JASPAR yes 21319909
chr17 79448616 79448628 TFAP2A JASPAR yes 56329807
chr17 79448616 79448631 TFAP2C JASPAR yes 21319910
chr17 79448616 79448631 TFAP2C JASPAR yes 56329808
chr17 79448618 79448627 TFAP2A JASPAR yes 21319911
chr17 79448618 79448627 TFAP2A JASPAR yes 56329809
chr17 79448620 79448635 NR2C2 JASPAR yes 21319912
chr17 79448620 79448635 NR2C2 JASPAR yes 56329810
chr17 79448622 79448631 SP1 TRANSFAC yes 21319913
chr17 79448622 79448631 SP1 TRANSFAC yes 56329811
chr17 79448622 79448632 SP1 JASPAR yes 21319914
chr17 79448622 79448632 SP1 JASPAR yes 56329812
chr17 79448623 79448633 SP1 JASPAR yes 21319915
chr17 79448623 79448633 SP1 JASPAR yes 56329813
chr17 79448624 79448630 MAZ TRANSFAC yes 21319916
chr17 79448624 79448630 MAZ TRANSFAC yes 56329814
chr17 79448628 79448635 SP1 TRANSFAC yes 21319917
chr17 79448628 79448635 SP1 TRANSFAC yes 56329815
chr17 79448628 79448638 SP1 JASPAR yes 21319918
chr17 79448628 79448638 SP1 JASPAR yes 56329816
chr17 79448630 79448635 SP1 TRANSFAC yes 21319919
chr17 79448630 79448635 SP1 TRANSFAC yes 56329817
chr17 79448631 79448636 SP1 TRANSFAC yes 21319920
chr17 79448631 79448636 SP1 TRANSFAC yes 56329818
chr17 79448642 79448648 TCF4 TRANSFAC yes 21319921
chr17 79448642 79448648 TCF4 TRANSFAC yes 56329819
chr17 79448656 79448668 EHF JASPAR yes 21319922
chr17 79448656 79448668 ELF4 JASPAR yes 21319923
chr17 79448656 79448668 EHF JASPAR yes 56329820
chr17 79448656 79448668 ELF4 JASPAR yes 56329821
chr17 79448662 79448680 ESR1 JASPAR yes 21319924
chr17 79448662 79448680 ESR1 JASPAR yes 56329822
SNP sites on vista26419[chr17:79448388-79448678]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 79448399 rs534333549 C CGGGACGGCA
E2F6 MAX NFYB REST
5114157
chr17 79448500 rs138144824 C T
E2F4 E2F6 FOS MAX NFYB
5114158
chr17 79448541 rs541803750 C T
E2F6 FOS MAX NFYB SP1 SREBF1
5114159
chr17 79448565 rs368148813 G A
E2F6 FOS H1TF2 MAX NFE NFYA NFYB SRF
5114160
chr17 79448569 rs545868407 A G
E2F6 FOS H1TF2 MAX NFE NFYA NFYB SRF
5114161
chr17 79448671 rs147231066 C G
E2F6 ESR1 FOS MAX NFYB
5114162
Genes possibly regulated by vista26419[chr17:79448388-79448678]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 79369275 79375658 + RP11-1055B8.6 ENSG00000263053.3 79369275 0.74 1.0 16349 20887
chr17 79373540 79433357 + RP11-1055B8.7 ENSG00000171282.9 79373540 0.69 1.0 16350 25152
chr17 79476997 79490873 - ACTG1 ENSG00000184009.5 79490873 0.6 1.0 16351 57805
chr17 79495422 79504156 + FSCN2 ENSG00000186765.7 79495422 0.89 1.0 16352 53256
chr17 79506911 79520987 - C17orf70 ENSG00000185504.12 79520987 0.64 1.0 16353 27691
Expression level of Genes
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miRNAs possibly regulated by vista26419[chr17:79448388-79448678]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results