EnhancerDB
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  3. vista26423[chr17:79546845-79547000]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26423[chr17:79546845-79547000]
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Tissue distribution of vista26423
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Transcription factor that possibly regulate vista26423[chr17:79546845-79547000]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 79546831 79546846 HNF4A JASPAR yes 21320019
chr17 79546831 79546846 HNF4A JASPAR yes 56334858
chr17 79546832 79546847 HNF4G JASPAR yes 21320020
chr17 79546832 79546847 HNF4G JASPAR yes 56334859
chr17 79546837 79546858 REST JASPAR yes 21320021
chr17 79546837 79546858 REST JASPAR yes 56334861
chr17 79546866 79546877 NFE2 JASPAR yes 21320022
chr17 79546866 79546877 NFE2 JASPAR yes 56334862
chr17 79546867 79546876 JDP2 JASPAR yes 21320023
chr17 79546867 79546876 JDP2 JASPAR yes 56334863
chr17 79546888 79546903 JUND JASPAR yes 21320024
chr17 79546888 79546903 JUND JASPAR yes 56334864
chr17 79546890 79546897 JUN TRANSFAC yes 21320025
chr17 79546890 79546897 JUN TRANSFAC yes 56334865
chr17 79546893 79546914 ZNF263 JASPAR yes 21320026
chr17 79546893 79546914 ZNF263 JASPAR yes 56334866
chr17 79546896 79546906 ZNF740 JASPAR yes 21320027
chr17 79546896 79546906 ZNF740 JASPAR yes 56334867
chr17 79546913 79546928 JUND JASPAR yes 21320028
chr17 79546913 79546928 JUND JASPAR yes 56334868
chr17 79546915 79546922 JUN TRANSFAC yes 21320029
chr17 79546915 79546922 JUN TRANSFAC yes 56334869
chr17 79546918 79546939 ZNF263 JASPAR yes 21320030
chr17 79546918 79546939 ZNF263 JASPAR yes 56334870
chr17 79546921 79546931 ZNF740 JASPAR yes 21320031
chr17 79546921 79546931 ZNF740 JASPAR yes 56334871
chr17 79546938 79546953 JUND JASPAR yes 21320032
chr17 79546938 79546953 JUND JASPAR yes 56334872
chr17 79546940 79546947 JUN TRANSFAC yes 21320033
chr17 79546940 79546947 JUN TRANSFAC yes 56334873
chr17 79546960 79546968 GATA3 JASPAR yes 21320034
chr17 79546960 79546968 GATA3 JASPAR yes 56334874
chr17 79546981 79546995 TCF7L2 JASPAR yes 21320035
chr17 79546981 79546995 TCF7L2 JASPAR yes 56334875
SNP sites on vista26423[chr17:79546845-79547000]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 79546850 rs4078371 G T
REST
5115141
chr17 79546856 rs571327903 G A
REST
5115142
chr17 79546888 rs545627936 ATGTGAGCTCACCCCCCATTCTCCTC A
JUND
5115143
chr17 79546924 rs556743021 C A,T
JUND ZNF263 ZNF740
5115144
chr17 79546925 rs192608548 C T
JUND ZNF263 ZNF740
5115145
Genes possibly regulated by vista26423[chr17:79546845-79547000]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 79476997 79490873 - ACTG1 ENSG00000184009.5 79490873 0.6 1.0 16351 44028
chr17 79495422 79504156 + FSCN2 ENSG00000186765.7 79495422 0.89 1.0 16352 48577
chr17 79506911 79520987 - C17orf70 ENSG00000185504.12 79520987 0.64 1.0 16353 74142
chr17 79523913 79615495 - NPLOC4 ENSG00000182446.9 79615495 0.62 1.0 16354 31505
chr17 79617489 79630142 - PDE6G ENSG00000185527.7 79630142 0.91 0.92 16355 16858
chr17 79632066 79633665 - OXLD1 ENSG00000204237.4 79633665 0.65 1.0 16356 13335
chr17 79633394 79640934 + CCDC137 ENSG00000185298.8 79633394 0.6 1.0 16357 13606
Expression level of Genes
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miRNAs possibly regulated by vista26423[chr17:79546845-79547000]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results