EnhancerDB
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  3. vista26438[chr17:80056613-80056910]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26438[chr17:80056613-80056910]
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Tissue distribution of vista26438
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Transcription factor that possibly regulate vista26438[chr17:80056613-80056910]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 80052637 80059094 POLR2A UCSC Txn Factor no Conserved 108310808
chr17 80052637 80059094 POLR2A UCSC Txn Factor no Conserved 108310809
chr17 80055858 80057511 MAX UCSC Txn Factor no Conserved 108310810
chr17 80055861 80057110 TAF1 UCSC Txn Factor no Conserved 108310812
chr17 80055975 80057328 MYC UCSC Txn Factor no Conserved 108310813
chr17 80056118 80056674 GABPA UCSC Txn Factor no Conserved 108310815
chr17 80056229 80056906 E2F6 UCSC Txn Factor no Conserved 108310819
chr17 80056312 80057303 PHF8 UCSC Txn Factor no Conserved 108310829
chr17 80056428 80057165 E2F1 UCSC Txn Factor no Conserved 108310839
chr17 80056539 80056881 NFYB UCSC Txn Factor no Conserved 108310859
chr17 80056561 80056937 RFX5 UCSC Txn Factor no Conserved 108310867
chr17 80056566 80056811 NFYA UCSC Txn Factor no Conserved 108310870
chr17 80056579 80056849 FOS UCSC Txn Factor no Conserved 108310875
chr17 80056628 80056837 SREBP1 UCSC Txn Factor no Conserved 108310892
chr17 80056659 80056849 PBX3 UCSC Txn Factor no Conserved 108310898
chr17 80056705 80056985 RXRA UCSC Txn Factor no Conserved 108310907
chr17 80056647 80056659 TFAP2A JASPAR yes 21320736
chr17 80056647 80056659 TFAP2B JASPAR yes 21320737
chr17 80056647 80056659 TFAP2C JASPAR yes 21320738
chr17 80056682 80056697 NFYB JASPAR yes 21320739
chr17 80056684 80056700 NFYA JASPAR yes 21320740
chr17 80056685 80056703 NFYA JASPAR yes 21320741
chr17 80056689 80056693 H1TF2 TRANSFAC yes 21320742
chr17 80056689 80056693 NFE TRANSFAC yes 21320743
chr17 80056689 80056693 SRF TRANSFAC yes 21320744
chr17 80056694 80056705 E2F1 JASPAR yes 21320745
chr17 80056695 80056709 PLAG1 JASPAR yes 21320746
chr17 80056720 80056724 H1TF2 TRANSFAC yes 21320747
chr17 80056720 80056724 NFE TRANSFAC yes 21320748
chr17 80056720 80056724 SRF TRANSFAC yes 21320749
chr17 80056721 80056732 YY2 JASPAR yes 21320750
chr17 80056734 80056746 ZBTB7A JASPAR yes 21320751
chr17 80056736 80056741 SP1 TRANSFAC yes 21320752
chr17 80056764 80056769 SP1 TRANSFAC yes 21320753
chr17 80056765 80056770 SP1 TRANSFAC yes 21320754
chr17 80056768 80056773 SP1 TRANSFAC yes 21320755
chr17 80056769 80056779 SP1 JASPAR yes 21320756
chr17 80056772 80056777 SP1 TRANSFAC yes 21320757
chr17 80056772 80056778 SP1 TRANSFAC yes 21320758
chr17 80056775 80056786 NFKB1 JASPAR yes 21320759
chr17 80056776 80056781 SP1 TRANSFAC yes 21320760
chr17 80056780 80056784 H4TF2 TRANSFAC yes 21320761
chr17 80056782 80056793 SPDEF JASPAR yes 21320762
chr17 80056789 80056802 TFAP2A JASPAR yes 21320763
chr17 80056789 80056802 TFAP2B JASPAR yes 21320764
chr17 80056789 80056802 TFAP2C JASPAR yes 21320765
chr17 80056813 80056823 HINFP JASPAR yes 21320766
chr17 80056827 80056839 TFAP2A JASPAR yes 21320767
chr17 80056828 80056839 TFAP2A JASPAR yes 21320768
chr17 80056829 80056838 TFAP2A JASPAR yes 21320769
chr17 80056852 80056862 ETV3 JASPAR yes 21320770
chr17 80056859 80056863 ESR1 TRANSFAC yes 21320771
chr17 80056884 80056899 ZBTB33 JASPAR yes 21320772
chr17 80056897 80056902 SP1 TRANSFAC yes 21320773
chr17 80056897 80056903 SP1 TRANSFAC yes 21320774
SNP sites on vista26438[chr17:80056613-80056910]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 80056636 rs145484893 C T
E2F1 E2F6 FOS GABPA MAX MYC NFYA NFYB PHF8 POLR2A RFX5 SREBP1 TAF1
5118669
chr17 80056774 rs560104024 G A
E2F1 E2F6 FOS MAX MYC NFYA NFYB PBX3 PHF8 POLR2A RFX5 RXRA SP1 SREBP1 TAF1
5118670
chr17 80056793 rs527337629 C T
E2F1 E2F6 FOS MAX MYC NFYA NFYB PBX3 PHF8 POLR2A RFX5 RXRA SPDEF SREBP1 TAF1 TFAP2A TFAP2B TFAP2C
5118671
chr17 80056884 rs62078751 T C
E2F1 E2F6 MAX MYC PHF8 POLR2A RFX5 RXRA TAF1 ZBTB33
5118672
chr17 80056900 rs568599408 CGG C
E2F1 E2F6 MAX MYC PHF8 POLR2A RFX5 RXRA SP1 TAF1
5118673
chr17 80056905 rs560959670 A G
E2F1 E2F6 MAX MYC PHF8 POLR2A RFX5 RXRA TAF1
5118674
Genes possibly regulated by vista26438[chr17:80056613-80056910]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 79976578 79981983 - STRA13 ENSG00000169689.10 79981983 0.77 0.99 16379 25370
chr17 79981178 79989027 + LRRC45 ENSG00000169683.3 79981178 0.61 1.0 16380 24565
chr17 79989500 79992080 + RAC3 ENSG00000169750.4 79989500 0.7 1.0 16381 32887
chr17 79993012 79995608 - DCXR ENSG00000169738.3 79995608 0.94 1.0 16382 38995
chr17 80005778 80009707 - RFNG ENSG00000169733.7 80009707 0.69 1.0 16383 53094
chr17 80008567 80015346 + GPS1 ENSG00000169727.8 80008567 0.64 1.0 16384 51954
chr17 80015382 80023763 - DUS1L ENSG00000169718.13 80023763 0.63 1.0 16385 67150
chr17 80036214 80056208 - FASN ENSG00000169710.6 80056208 0.87 1.0 16386 99595
Expression level of Genes
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miRNAs possibly regulated by vista26438[chr17:80056613-80056910]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 80194583 80194604 + hsa-miR-6787-3p MIMAT0027475 80186917 0.06648530833647433 0.0 0.0 768
Expression level of miRNAs
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