EnhancerDB
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  3. vista26439[chr17:80060759-80061000]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26439[chr17:80060759-80061000]
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Tissue distribution of vista26439
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Transcription factor that possibly regulate vista26439[chr17:80060759-80061000]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 80060714 80061153 CTCF UCSC Txn Factor no Conserved 108310933
chr17 80060735 80061091 MAX UCSC Txn Factor no Conserved 108310936
chr17 80060791 80060909 USF1 UCSC Txn Factor no Conserved 108310944
chr17 80060794 80060994 MXI1 UCSC Txn Factor no Conserved 108310948
chr17 80060794 80061055 RAD21 UCSC Txn Factor no Conserved 108310950
chr17 80060754 80060759 GATA1 TRANSFAC yes 21320775
chr17 80060754 80060759 GATA1 TRANSFAC yes 56348520
chr17 80060754 80060760 GATA3 JASPAR yes 21320776
chr17 80060754 80060760 GATA3 JASPAR yes 56348521
chr17 80060758 80060773 FOXP1 JASPAR yes 21320777
chr17 80060758 80060773 FOXP1 JASPAR yes 56348522
chr17 80060759 80060774 FOXP1 JASPAR yes 21320778
chr17 80060759 80060774 FOXP1 JASPAR yes 56348523
chr17 80060760 80060775 FOXP1 JASPAR yes 21320779
chr17 80060760 80060775 FOXP1 JASPAR yes 56348524
chr17 80060760 80060781 IRF1 JASPAR yes 21320780
chr17 80060760 80060781 IRF1 JASPAR yes 56348525
chr17 80060761 80060776 FOXP1 JASPAR yes 21320781
chr17 80060761 80060776 FOXP1 JASPAR yes 56348526
chr17 80060763 80060778 FOXP1 JASPAR yes 21320782
chr17 80060763 80060778 FOXP1 JASPAR yes 56348527
chr17 80060764 80060779 STAT2 JASPAR yes 21320783
chr17 80060764 80060779 STAT2 JASPAR yes 56348528
chr17 80060765 80060780 FOXP1 JASPAR yes 21320784
chr17 80060765 80060780 FOXP1 JASPAR yes 56348529
chr17 80060765 80060786 IRF1 JASPAR yes 21320785
chr17 80060765 80060786 IRF1 JASPAR yes 56348530
chr17 80060766 80060787 IRF1 JASPAR yes 21320786
chr17 80060766 80060787 IRF1 JASPAR yes 56348531
chr17 80060767 80060779 FOXC2 JASPAR yes 21320787
chr17 80060767 80060779 FOXC2 JASPAR yes 56348532
chr17 80060767 80060787 RREB1 JASPAR yes 21320788
chr17 80060767 80060787 RREB1 JASPAR yes 56348533
chr17 80060768 80060779 FOXP2 JASPAR yes 21320789
chr17 80060768 80060779 FOXP2 JASPAR yes 56348534
chr17 80060772 80060792 RREB1 JASPAR yes 21320790
chr17 80060772 80060792 RREB1 JASPAR yes 56348535
chr17 80060782 80060796 GLIS3 JASPAR yes 21320791
chr17 80060782 80060796 GLIS3 JASPAR yes 56348536
chr17 80060799 80060806 JUN TRANSFAC yes 21320792
chr17 80060799 80060806 JUN TRANSFAC yes 56348537
chr17 80060818 80060830 GLI2 JASPAR yes 21320793
chr17 80060818 80060830 GLI2 JASPAR yes 56348538
chr17 80060826 80060841 RFX5 JASPAR yes 21320794
chr17 80060826 80060841 RFX5 JASPAR yes 56348539
chr17 80060833 80060843 SREBF1 JASPAR yes 21320795
chr17 80060833 80060843 SREBF2 JASPAR yes 21320796
chr17 80060833 80060843 SREBF1 JASPAR yes 56348540
chr17 80060833 80060843 SREBF2 JASPAR yes 56348541
chr17 80060856 80060868 HES5 JASPAR yes 21320797
chr17 80060856 80060868 HES7 JASPAR yes 21320798
chr17 80060856 80060868 HES5 JASPAR yes 56348542
chr17 80060856 80060868 HES7 JASPAR yes 56348543
chr17 80060857 80060867 CLOCK JASPAR yes 21320799
chr17 80060857 80060867 HEY1 JASPAR yes 21320800
chr17 80060857 80060867 HEY2 JASPAR yes 21320801
chr17 80060857 80060867 MAX JASPAR yes 21320802
chr17 80060857 80060867 MLXIPL JASPAR yes 21320803
chr17 80060857 80060867 MLX JASPAR yes 21320804
chr17 80060857 80060867 MNT JASPAR yes 21320805
chr17 80060857 80060867 TFE3 JASPAR yes 21320806
chr17 80060857 80060867 TFEB JASPAR yes 21320807
chr17 80060857 80060867 TFEC JASPAR yes 21320808
chr17 80060857 80060867 CLOCK JASPAR yes 56348544
chr17 80060857 80060867 HEY1 JASPAR yes 56348545
chr17 80060857 80060867 HEY2 JASPAR yes 56348546
chr17 80060857 80060867 MAX JASPAR yes 56348547
chr17 80060857 80060867 MLXIPL JASPAR yes 56348548
chr17 80060857 80060867 MLX JASPAR yes 56348549
chr17 80060857 80060867 MNT JASPAR yes 56348550
chr17 80060857 80060867 TFE3 JASPAR yes 56348551
chr17 80060857 80060867 TFEB JASPAR yes 56348552
chr17 80060857 80060867 TFEC JASPAR yes 56348553
chr17 80060857 80060868 USF1 JASPAR yes 21320809
chr17 80060857 80060868 USF2 JASPAR yes 21320810
chr17 80060857 80060868 USF1 JASPAR yes 56348554
chr17 80060857 80060868 USF2 JASPAR yes 56348555
chr17 80060858 80060868 MAX JASPAR yes 21320811
chr17 80060858 80060868 MAX JASPAR yes 56348556
chr17 80060859 80060864 MYC TRANSFAC yes 21320812
chr17 80060859 80060864 USF1 TRANSFAC yes 21320813
chr17 80060859 80060864 USF2 TRANSFAC yes 21320814
chr17 80060859 80060864 MYC TRANSFAC yes 56348557
chr17 80060859 80060864 USF1 TRANSFAC yes 56348558
chr17 80060859 80060864 USF2 TRANSFAC yes 56348559
chr17 80060859 80060866 USF1 JASPAR yes 21320815
chr17 80060859 80060866 USF1 JASPAR yes 56348560
chr17 80060874 80060887 TFAP2A JASPAR yes 21320816
chr17 80060874 80060887 TFAP2A JASPAR yes 56348561
chr17 80060881 80060900 REST JASPAR yes 21320817
chr17 80060881 80060900 REST JASPAR yes 56348562
chr17 80060882 80060886 LFA1 TRANSFAC yes 21320818
chr17 80060882 80060886 LFA1 TRANSFAC yes 56348563
chr17 80060885 80060905 ESR1 JASPAR yes 21320819
chr17 80060885 80060905 ESR1 JASPAR yes 56348564
chr17 80060886 80060896 SMAD3 JASPAR yes 21320820
chr17 80060886 80060896 SMAD3 JASPAR yes 56348565
chr17 80060889 80060907 ESR2 JASPAR yes 21320821
chr17 80060889 80060907 ESR2 JASPAR yes 56348566
chr17 80060890 80060905 ESR2 JASPAR yes 21320822
chr17 80060890 80060905 ESR2 JASPAR yes 56348567
chr17 80060890 80060910 ESR1 JASPAR yes 21320823
chr17 80060890 80060910 ESR1 JASPAR yes 56348568
chr17 80060909 80060926 RARA JASPAR yes 21320824
chr17 80060909 80060926 RXRA JASPAR yes 21320825
chr17 80060909 80060926 RARA JASPAR yes 56348569
chr17 80060909 80060926 RXRA JASPAR yes 56348570
chr17 80060910 80060914 ESR1 TRANSFAC yes 21320826
chr17 80060910 80060914 ESR1 TRANSFAC yes 56348571
chr17 80060910 80060922 INSM1 JASPAR yes 21320827
chr17 80060910 80060922 INSM1 JASPAR yes 56348572
chr17 80060910 80060925 ZIC4 JASPAR yes 21320828
chr17 80060910 80060925 ZIC4 JASPAR yes 56348573
chr17 80060911 80060925 ZIC1 JASPAR yes 21320829
chr17 80060911 80060925 ZIC1 JASPAR yes 56348574
chr17 80060917 80060922 SP1 TRANSFAC yes 21320830
chr17 80060917 80060922 SP1 TRANSFAC yes 56348575
chr17 80060924 80060943 CTCF JASPAR yes 21320831
chr17 80060924 80060943 CTCF JASPAR yes 56348576
chr17 80060948 80060960 GLI2 JASPAR yes 21320832
chr17 80060948 80060960 GLI2 JASPAR yes 56348577
chr17 80060949 80060959 RUNX3 JASPAR yes 21320833
chr17 80060949 80060959 RUNX3 JASPAR yes 56348578
chr17 80060978 80060983 ETS2 TRANSFAC yes 21320834
chr17 80060978 80060983 ETS2 TRANSFAC yes 56348579
chr17 80060995 80061000 TFAP2A TRANSFAC yes 21320835
chr17 80060995 80061000 TFAP2A TRANSFAC yes 56348580
chr17 80060995 80061001 MZF1 JASPAR yes 21320836
chr17 80060995 80061001 MZF1 JASPAR yes 56348581
SNP sites on vista26439[chr17:80060759-80061000]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 80060769 rs530066904 A C
CTCF FOXC2 FOXP1 FOXP2 IRF1 MAX RREB1 STAT2
5118765
chr17 80060828 rs112259961 C G
CTCF GLI2 MAX MXI1 RAD21 RFX5 USF1
5118766
chr17 80060829 rs9908277 T C
CTCF GLI2 MAX MXI1 RAD21 RFX5 USF1
5118767
chr17 80060949 rs192121023 C T
CTCF GLI2 MAX MXI1 RAD21 RUNX3
5118768
chr17 80060956 rs116461295 G C
CTCF GLI2 MAX MXI1 RAD21 RUNX3
5118769
Genes possibly regulated by vista26439[chr17:80060759-80061000]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 79976578 79981983 - STRA13 ENSG00000169689.10 79981983 0.77 0.99 16379 21224
chr17 79981178 79989027 + LRRC45 ENSG00000169683.3 79981178 0.61 1.0 16380 20419
chr17 79989500 79992080 + RAC3 ENSG00000169750.4 79989500 0.7 1.0 16381 28741
chr17 79993012 79995608 - DCXR ENSG00000169738.3 79995608 0.94 1.0 16382 34849
chr17 80005778 80009707 - RFNG ENSG00000169733.7 80009707 0.69 1.0 16383 48948
chr17 80008567 80015346 + GPS1 ENSG00000169727.8 80008567 0.64 1.0 16384 47808
chr17 80015382 80023763 - DUS1L ENSG00000169718.13 80023763 0.63 1.0 16385 63004
chr17 80036214 80056208 - FASN ENSG00000169710.6 80056208 0.87 1.0 16386 95449
Expression level of Genes
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miRNAs possibly regulated by vista26439[chr17:80060759-80061000]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 80194583 80194604 + hsa-miR-6787-3p MIMAT0027475 80186917 0.06880702825548658 0.0 0.0 768
Expression level of miRNAs
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