EnhancerDB
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  3. vista26448[chr17:80180742-80180993]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista26448[chr17:80180742-80180993]
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Tissue distribution of vista26448
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Transcription factor that possibly regulate vista26448[chr17:80180742-80180993]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr17 80180754 80180768 FOXF2 JASPAR yes 21321175
chr17 80180755 80180766 FOXA1 JASPAR yes 21321176
chr17 80180755 80180770 FOXA1 JASPAR yes 21321177
chr17 80180757 80180768 FOXP2 JASPAR yes 21321178
chr17 80180759 80180766 FOXD2 JASPAR yes 21321179
chr17 80180759 80180766 FOXI1 JASPAR yes 21321180
chr17 80180759 80180766 FOXL1 JASPAR yes 21321181
chr17 80180759 80180766 FOXO4 JASPAR yes 21321182
chr17 80180759 80180766 FOXO6 JASPAR yes 21321183
chr17 80180759 80180766 FOXP3 JASPAR yes 21321184
chr17 80180759 80180767 FOXD1 JASPAR yes 21321185
chr17 80180759 80180767 FOXG1 JASPAR yes 21321186
chr17 80180759 80180767 FOXO3 JASPAR yes 21321187
chr17 80180769 80180784 HNF4G JASPAR yes 21321188
chr17 80180770 80180774 ESR1 TRANSFAC yes 21321189
chr17 80180770 80180785 HNF4A JASPAR yes 21321190
chr17 80180774 80180780 SOX10 JASPAR yes 21321191
chr17 80180782 80180796 ZIC1 JASPAR yes 21321192
chr17 80180782 80180797 ZIC3 JASPAR yes 21321193
chr17 80180782 80180797 ZIC4 JASPAR yes 21321194
chr17 80180785 80180798 TFAP2A JASPAR yes 21321195
chr17 80180785 80180798 TFAP2B JASPAR yes 21321196
chr17 80180785 80180798 TFAP2C JASPAR yes 21321197
chr17 80180824 80180835 FOXH1 JASPAR yes 21321198
chr17 80180852 80180873 ZNF263 JASPAR yes 21321199
chr17 80180853 80180859 ZNF354C JASPAR yes 21321200
chr17 80180855 80180860 GATA2 JASPAR yes 21321201
chr17 80180862 80180872 SP1 JASPAR yes 21321202
chr17 80180863 80180868 ETS2 TRANSFAC yes 21321203
chr17 80180863 80180883 RREB1 JASPAR yes 21321204
chr17 80180866 80180876 ZNF740 JASPAR yes 21321205
chr17 80180870 80180891 ZNF263 JASPAR yes 21321206
chr17 80180880 80180901 ZNF263 JASPAR yes 21321207
chr17 80180881 80180886 ETS2 TRANSFAC yes 21321208
chr17 80180886 80180896 SP1 JASPAR yes 21321209
chr17 80180889 80180899 MZF1 JASPAR yes 21321210
chr17 80180892 80180897 TFAP2A TRANSFAC yes 21321211
chr17 80180892 80180898 MZF1 JASPAR yes 21321212
chr17 80180898 80180906 DLX6 JASPAR yes 21321213
chr17 80180898 80180906 MSX1 JASPAR yes 21321214
chr17 80180902 80180909 NKX3-1 JASPAR yes 21321215
chr17 80180905 80180915 EMX1 JASPAR yes 21321216
chr17 80180905 80180915 HOXB3 JASPAR yes 21321217
chr17 80180905 80180915 NOTO JASPAR yes 21321218
chr17 80180906 80180914 NKX6-1 JASPAR yes 21321219
chr17 80180906 80180914 NKX6-2 JASPAR yes 21321220
chr17 80180906 80180916 POU6F2 JASPAR yes 21321221
chr17 80180923 80180933 HOXA13 JASPAR yes 21321222
chr17 80180928 80180939 TBX20 JASPAR yes 21321223
chr17 80180931 80180944 ATF4 JASPAR yes 21321224
chr17 80180932 80180946 TCF7L2 JASPAR yes 21321225
chr17 80180932 80180947 LEF1 JASPAR yes 21321226
chr17 80180936 80180942 TCF4 TRANSFAC yes 21321227
chr17 80180943 80180954 CEBPA JASPAR yes 21321228
chr17 80180954 80180966 TAL1 JASPAR yes 21321229
chr17 80180956 80180966 FIGLA JASPAR yes 21321230
chr17 80180956 80180966 MSC JASPAR yes 21321231
chr17 80180956 80180966 MYF6 JASPAR yes 21321232
chr17 80180956 80180966 TFAP4 JASPAR yes 21321233
chr17 80180956 80180968 TAL1 JASPAR yes 21321234
SNP sites on vista26448[chr17:80180742-80180993]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr17 80180765 rs193150308 C G
FOXA1 FOXD1 FOXD2 FOXF2 FOXG1 FOXI1 FOXL1 FOXO3 FOXO4 FOXO6 FOXP2 FOXP3
5119642
chr17 80180790 rs115701179 T G
TFAP2A TFAP2B TFAP2C ZIC1 ZIC3 ZIC4
5119643
chr17 80180798 rs147052969 T C
TFAP2A TFAP2B TFAP2C
5119644
chr17 80180823 rs576569845 A G no 5119645
chr17 80180868 rs146950116 A AG
ETS2 RREB1 SP1 ZNF263 ZNF740
5119646
chr17 80180919 rs72854779 C G,T no 5119647
Genes possibly regulated by vista26448[chr17:80180742-80180993]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr17 80059336 80170706 - CCDC57 ENSG00000176155.14 80170706 0.76 1.0 16387 89964
chr17 80186273 80219005 + SLC16A3 ENSG00000141526.10 80186273 0.75 1.0 16388 94720
chr17 80196899 80231607 - CSNK1D ENSG00000141551.10 80231607 0.62 1.0 16389 49386
chr17 80214131 80216080 + AC132872.2 ENSG00000268852.1 80214131 0.78 0.99 16390 66862
chr17 80272744 80275478 - CD7 ENSG00000173762.3 80275478 0.96 0.95 16391 5515
Expression level of Genes
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miRNAs possibly regulated by vista26448[chr17:80180742-80180993]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr17 80194583 80194604 + hsa-miR-6787-3p MIMAT0027475 80186917 0.05547801814375436 0.0 0.0 768
Expression level of miRNAs
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